RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 CCDC9Q9Y3X0 531 aaKnown RBP18.05■□□□□ 0.48
ERBB3-215ENST00000550828 OVOS2A0A0G2JMS6 1433 aa18.05■□□□□ 0.48
ERBB3-215ENST00000550828 TCP11L2Q8N4U5 519 aa18.04■□□□□ 0.48
ERBB3-215ENST00000550828 WDR43Q15061 677 aaKnown RBP eCLIP18.02■□□□□ 0.48
ERBB3-215ENST00000550828 FAM98CQ17RN3 349 aaKnown RBP18.02■□□□□ 0.48
ERBB3-215ENST00000550828 BARGINQ6ZT62 677 aa18.02■□□□□ 0.48
ERBB3-215ENST00000550828 PLEKHF1Q96S99 279 aa18.02■□□□□ 0.48
ERBB3-215ENST00000550828 PRKAR2BP31323 418 aa18.01■□□□□ 0.47
ERBB3-215ENST00000550828 THRAP3Q9Y2W1 955 aaKnown RBP18.01■□□□□ 0.47
ERBB3-215ENST00000550828 TNS2Q63HR2 1409 aa18■□□□□ 0.47
ERBB3-215ENST00000550828 PHACTR3Q96KR7 559 aa18■□□□□ 0.47
ERBB3-215ENST00000550828 TOGARAM1Q9Y4F4 1720 aa17.99■□□□□ 0.47
ERBB3-215ENST00000550828 FCHSD2O94868 740 aa17.99■□□□□ 0.47
ERBB3-215ENST00000550828 IL2RBP14784 551 aa17.99■□□□□ 0.47
ERBB3-215ENST00000550828 CCDC146Q8IYE0 955 aa17.99■□□□□ 0.47
ERBB3-215ENST00000550828 FAM9BQ8IZU0 186 aa17.99■□□□□ 0.47
ERBB3-215ENST00000550828 ONECUT3O60422 494 aaPredicted RBP17.98■□□□□ 0.47
ERBB3-215ENST00000550828 SCN11AQ9UI33 1791 aa17.98■□□□□ 0.47
ERBB3-215ENST00000550828 ADAMTS7Q9UKP4 1686 aa17.97■□□□□ 0.47
ERBB3-215ENST00000550828 SF3B2Q13435 895 aaKnown RBP17.97■□□□□ 0.47
ERBB3-215ENST00000550828 RAPGEF4Q8WZA2 1011 aa17.97■□□□□ 0.47
ERBB3-215ENST00000550828 SBF2Q86WG5 1849 aa17.97■□□□□ 0.47
ERBB3-215ENST00000550828 SRCAPQ6ZRS2 3230 aa17.97■□□□□ 0.47
ERBB3-215ENST00000550828 PLEKHG2Q9H7P9 1386 aa17.96■□□□□ 0.47
ERBB3-215ENST00000550828 TATP17735 454 aaPredicted RBP17.96■□□□□ 0.47
ERBB3-215ENST00000550828 EP400Q96L91 3159 aa17.96■□□□□ 0.47
ERBB3-215ENST00000550828 DOT1LQ8TEK3 1739 aa17.95■□□□□ 0.46
ERBB3-215ENST00000550828 ITGB4P16144 1822 aa17.94■□□□□ 0.46
ERBB3-215ENST00000550828 SENP3-EIF4A1A0A087X0R7 540 aa17.94■□□□□ 0.46
ERBB3-215ENST00000550828 MTHFSDQ2M296 383 aaKnown RBP17.94■□□□□ 0.46
ERBB3-215ENST00000550828 SEPT12Q8IYM1 358 aa17.94■□□□□ 0.46
ERBB3-215ENST00000550828 KAT6BQ8WYB5 2073 aa17.94■□□□□ 0.46
ERBB3-215ENST00000550828 CYP27B1O15528 508 aa17.93■□□□□ 0.46
ERBB3-215ENST00000550828 RUNDC1Q96C34 613 aa17.93■□□□□ 0.46
ERBB3-215ENST00000550828 CDCA7Q9BWT1 371 aaPredicted RBP17.93■□□□□ 0.46
ERBB3-215ENST00000550828 SIPA1L3O60292 1781 aaPredicted RBP17.93■□□□□ 0.46
ERBB3-215ENST00000550828 ZCRB1Q8TBF4 217 aaKnown RBP17.92■□□□□ 0.46
ERBB3-215ENST00000550828 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.92■□□□□ 0.46
ERBB3-215ENST00000550828 KDM6AO15550 1401 aaPredicted RBP17.9■□□□□ 0.46
ERBB3-215ENST00000550828 APAF1O14727 1248 aa17.9■□□□□ 0.46
ERBB3-215ENST00000550828 DDB1Q16531 1140 aa17.9■□□□□ 0.46
ERBB3-215ENST00000550828 PLEKHO1Q53GL0 409 aaPredicted RBP17.9■□□□□ 0.46
ERBB3-215ENST00000550828 ZNF530Q6P9A1 599 aaPredicted RBP17.9■□□□□ 0.46
ERBB3-215ENST00000550828 MARCH10Q8NA82 808 aaPredicted RBP17.9■□□□□ 0.46
ERBB3-215ENST00000550828 RRP7AQ9Y3A4 280 aaKnown RBP17.9■□□□□ 0.46
ERBB3-215ENST00000550828 A0A0G2JS52 829 aa17.89■□□□□ 0.45
ERBB3-215ENST00000550828 MYT1Q01538 1121 aa17.89■□□□□ 0.45
ERBB3-215ENST00000550828 NFE2L2Q16236 605 aa17.89■□□□□ 0.45
ERBB3-215ENST00000550828 AMOTQ4VCS5 1084 aa17.89■□□□□ 0.45
ERBB3-215ENST00000550828 DEFB132Q7Z7B7 95 aa17.89■□□□□ 0.45
ERBB3-215ENST00000550828 SPG7Q9UQ90 795 aa17.89■□□□□ 0.45
ERBB3-215ENST00000550828 EXOC5O00471 708 aa17.88■□□□□ 0.45
ERBB3-215ENST00000550828 PHKG2P15735 406 aa17.88■□□□□ 0.45
ERBB3-215ENST00000550828 TMPOP42166 694 aaKnown RBP17.88■□□□□ 0.45
ERBB3-215ENST00000550828 PCDH11XQ9BZA7 1347 aa17.88■□□□□ 0.45
ERBB3-215ENST00000550828 PCDH11YQ9BZA8 1340 aa17.88■□□□□ 0.45
ERBB3-215ENST00000550828 MAPK8IP3Q9UPT6 1336 aa17.88■□□□□ 0.45
ERBB3-215ENST00000550828 FAM182BQ5T319 152 aa17.87■□□□□ 0.45
ERBB3-215ENST00000550828 DDX54Q8TDD1 881 aaKnown RBP17.87■□□□□ 0.45
ERBB3-215ENST00000550828 PNNQ9H307 717 aaKnown RBP17.87■□□□□ 0.45
ERBB3-215ENST00000550828 MAP3K5Q99683 1374 aa17.87■□□□□ 0.45
ERBB3-215ENST00000550828 NHSQ6T4R5 1651 aa17.87■□□□□ 0.45
ERBB3-215ENST00000550828 GAS2L2Q8NHY3 880 aa17.86■□□□□ 0.45
ERBB3-215ENST00000550828 MRC1P22897 1456 aa17.86■□□□□ 0.45
ERBB3-215ENST00000550828 TRIM35Q9UPQ4 493 aa17.85■□□□□ 0.45
ERBB3-215ENST00000550828 BAG6P46379 1132 aa17.84■□□□□ 0.45
ERBB3-215ENST00000550828 NKX1-1Q15270 411 aaPredicted RBP17.84■□□□□ 0.45
ERBB3-215ENST00000550828 AKAP4Q5JQC9 854 aa17.84■□□□□ 0.45
ERBB3-215ENST00000550828 KRT27Q7Z3Y8 459 aa17.84■□□□□ 0.45
ERBB3-215ENST00000550828 IFNL2Q8IZJ0 200 aa17.84■□□□□ 0.45
ERBB3-215ENST00000550828 BTAF1O14981 1849 aa17.84■□□□□ 0.45
ERBB3-215ENST00000550828 DCTN1Q14203 1278 aa17.83■□□□□ 0.44
ERBB3-215ENST00000550828 NEUROD2Q15784 382 aa17.83■□□□□ 0.44
ERBB3-215ENST00000550828 IL17REQ8NFR9 667 aa17.83■□□□□ 0.44
ERBB3-215ENST00000550828 THUMPD2Q9BTF0 503 aaKnown RBP17.83■□□□□ 0.44
ERBB3-215ENST00000550828 LGR6Q9HBX8 967 aa17.83■□□□□ 0.44
ERBB3-215ENST00000550828 TNS1Q9HBL0 1735 aaKnown RBP17.83■□□□□ 0.44
ERBB3-215ENST00000550828 PAPPAQ13219 1627 aa17.83■□□□□ 0.44
ERBB3-215ENST00000550828 BCL9O00512 1426 aa17.82■□□□□ 0.44
ERBB3-215ENST00000550828 RIPK4P57078 832 aa17.82■□□□□ 0.44
ERBB3-215ENST00000550828 PDE3BQ13370 1112 aa17.82■□□□□ 0.44
ERBB3-215ENST00000550828 C1orf141Q5JVX7 400 aa17.82■□□□□ 0.44
ERBB3-215ENST00000550828 MPRIPQ6WCQ1 1025 aa17.82■□□□□ 0.44
ERBB3-215ENST00000550828 KDM3BQ7LBC6 1761 aa17.81■□□□□ 0.44
ERBB3-215ENST00000550828 CEMIPQ8WUJ3 1361 aa17.81■□□□□ 0.44
ERBB3-215ENST00000550828 GNAT3A8MTJ3 354 aa17.81■□□□□ 0.44
ERBB3-215ENST00000550828 NEFMP07197 916 aa17.81■□□□□ 0.44
ERBB3-215ENST00000550828 MCM10Q7L590 875 aa17.81■□□□□ 0.44
ERBB3-215ENST00000550828 RNMTO43148 476 aaKnown RBP17.8■□□□□ 0.44
ERBB3-215ENST00000550828 SALL2Q9Y467 1007 aaPredicted RBP17.8■□□□□ 0.44
ERBB3-215ENST00000550828 PTF1AQ7RTS3 328 aa17.79■□□□□ 0.44
ERBB3-215ENST00000550828 UBR2Q8IWV8 1755 aa17.79■□□□□ 0.44
ERBB3-215ENST00000550828 ZNF521Q96K83 1311 aa17.78■□□□□ 0.44
ERBB3-215ENST00000550828 DCAF5Q96JK2 942 aa17.78■□□□□ 0.44
ERBB3-215ENST00000550828 PSDA5PKW4 1024 aaPredicted RBP17.77■□□□□ 0.44
ERBB3-215ENST00000550828 HTATSF1O43719 755 aaKnown RBP17.77■□□□□ 0.44
ERBB3-215ENST00000550828 KCNQ2O43526 872 aa17.76■□□□□ 0.43
ERBB3-215ENST00000550828 HSP90AB1P08238 724 aaKnown RBP17.76■□□□□ 0.43
ERBB3-215ENST00000550828 HNRNPUQ00839 825 aaKnown RBP eCLIP17.76■□□□□ 0.43
ERBB3-215ENST00000550828 CCDC27Q2M243 656 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms