RNA–Protein interactions for RNA: ENST00000547323.1

GPN3-205, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-205ENST00000547323 PDE3BQ13370 1112 aa27.94■■■□□ 2.06
GPN3-205ENST00000547323 NUDCQ9Y266 331 aa27.94■■■□□ 2.06
GPN3-205ENST00000547323 OVOS2A0A0G2JMS6 1433 aa27.93■■■□□ 2.06
GPN3-205ENST00000547323 KDRP35968 1356 aa27.93■■■□□ 2.06
GPN3-205ENST00000547323 ZCRB1Q8TBF4 217 aaKnown RBP27.92■■■□□ 2.06
GPN3-205ENST00000547323 U2AF1L5P0DN76 240 aaPredicted RBP27.91■■■□□ 2.06
GPN3-205ENST00000547323 U2AF1Q01081 240 aaKnown RBP eCLIP27.91■■■□□ 2.06
GPN3-205ENST00000547323 MARCH10Q8NA82 808 aaPredicted RBP27.91■■■□□ 2.06
GPN3-205ENST00000547323 TNS2Q63HR2 1409 aa27.9■■■□□ 2.06
GPN3-205ENST00000547323 SHANK3Q9BYB0 1731 aa27.89■■■□□ 2.06
GPN3-205ENST00000547323 DDX54Q8TDD1 881 aaKnown RBP27.89■■■□□ 2.06
GPN3-205ENST00000547323 RSPH6AQ9H0K4 717 aa27.86■■■□□ 2.05
GPN3-205ENST00000547323 PKD1L3Q7Z443 1732 aa27.86■■■□□ 2.05
GPN3-205ENST00000547323 CYP27B1O15528 508 aa27.83■■■□□ 2.05
GPN3-205ENST00000547323 SPG7Q9UQ90 795 aa27.83■■■□□ 2.05
GPN3-205ENST00000547323 FCHSD2O94868 740 aa27.82■■■□□ 2.04
GPN3-205ENST00000547323 PRKAR2BP31323 418 aa27.82■■■□□ 2.04
GPN3-205ENST00000547323 PLEKHO1Q53GL0 409 aaPredicted RBP27.82■■■□□ 2.04
GPN3-205ENST00000547323 MRS2Q9HD23 443 aa27.82■■■□□ 2.04
GPN3-205ENST00000547323 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.82■■■□□ 2.04
GPN3-205ENST00000547323 PHACTR3Q96KR7 559 aa27.81■■■□□ 2.04
GPN3-205ENST00000547323 PCDH11XQ9BZA7 1347 aa27.79■■■□□ 2.04
GPN3-205ENST00000547323 PCDH11YQ9BZA8 1340 aa27.79■■■□□ 2.04
GPN3-205ENST00000547323 FAM196AQ6ZSG2 479 aa27.79■■■□□ 2.04
GPN3-205ENST00000547323 ADAMTS8Q9UP79 889 aa27.79■■■□□ 2.04
GPN3-205ENST00000547323 KAT6BQ8WYB5 2073 aa27.79■■■□□ 2.04
GPN3-205ENST00000547323 EP400Q96L91 3159 aa27.78■■■□□ 2.04
GPN3-205ENST00000547323 WDR43Q15061 677 aaKnown RBP eCLIP27.78■■■□□ 2.04
GPN3-205ENST00000547323 AMOTQ4VCS5 1084 aa27.78■■■□□ 2.04
GPN3-205ENST00000547323 MIER1Q8N108 512 aa27.78■■■□□ 2.04
GPN3-205ENST00000547323 MTHFSDQ2M296 383 aaKnown RBP27.77■■■□□ 2.04
GPN3-205ENST00000547323 ZNF530Q6P9A1 599 aaPredicted RBP27.77■■■□□ 2.04
GPN3-205ENST00000547323 SBF2Q86WG5 1849 aa27.76■■■□□ 2.03
GPN3-205ENST00000547323 PLEKHG2Q9H7P9 1386 aa27.75■■■□□ 2.03
GPN3-205ENST00000547323 PHKG2P15735 406 aa27.75■■■□□ 2.03
GPN3-205ENST00000547323 PNISRQ8TF01 805 aaKnown RBP27.75■■■□□ 2.03
GPN3-205ENST00000547323 PLEKHF1Q96S99 279 aa27.75■■■□□ 2.03
GPN3-205ENST00000547323 IFNL2Q8IZJ0 200 aa27.74■■■□□ 2.03
GPN3-205ENST00000547323 ACSBG1Q96GR2 724 aa27.74■■■□□ 2.03
GPN3-205ENST00000547323 PTF1AQ7RTS3 328 aa27.73■■■□□ 2.03
GPN3-205ENST00000547323 TRIM37O94972 964 aa27.72■■■□□ 2.03
GPN3-205ENST00000547323 CCDC146Q8IYE0 955 aa27.72■■■□□ 2.03
GPN3-205ENST00000547323 BCL9O00512 1426 aa27.71■■■□□ 2.03
GPN3-205ENST00000547323 KCNQ2O43526 872 aa27.71■■■□□ 2.03
GPN3-205ENST00000547323 NKX1-1Q15270 411 aaPredicted RBP27.71■■■□□ 2.03
GPN3-205ENST00000547323 UPF1Q92900 1129 aaKnown RBP eCLIP27.71■■■□□ 2.03
GPN3-205ENST00000547323 C1orf141Q5JVX7 400 aa27.69■■■□□ 2.02
GPN3-205ENST00000547323 MPRIPQ6WCQ1 1025 aa27.68■■■□□ 2.02
GPN3-205ENST00000547323 DOT1LQ8TEK3 1739 aa27.67■■■□□ 2.02
GPN3-205ENST00000547323 PRIM1P49642 420 aaKnown RBP27.67■■■□□ 2.02
GPN3-205ENST00000547323 AKAP4Q5JQC9 854 aa27.67■■■□□ 2.02
GPN3-205ENST00000547323 PNNQ9H307 717 aaKnown RBP27.67■■■□□ 2.02
GPN3-205ENST00000547323 TOGARAM1Q9Y4F4 1720 aa27.67■■■□□ 2.02
GPN3-205ENST00000547323 CCER2I3L3R5 266 aa27.66■■■□□ 2.02
GPN3-205ENST00000547323 GAS2L2Q8NHY3 880 aa27.66■■■□□ 2.02
GPN3-205ENST00000547323 SYTL4Q96C24 671 aaPredicted RBP27.64■■■□□ 2.02
GPN3-205ENST00000547323 LGR6Q9HBX8 967 aa27.64■■■□□ 2.02
GPN3-205ENST00000547323 KDM6AO15550 1401 aaPredicted RBP27.64■■■□□ 2.02
GPN3-205ENST00000547323 VIRMAQ69YN4 1812 aaKnown RBP27.64■■■□□ 2.01
GPN3-205ENST00000547323 MAPK8IP3Q9UPT6 1336 aa27.64■■■□□ 2.01
GPN3-205ENST00000547323 NHSQ6T4R5 1651 aa27.63■■■□□ 2.01
GPN3-205ENST00000547323 ITGB4P16144 1822 aa27.63■■■□□ 2.01
GPN3-205ENST00000547323 NEFMP07197 916 aa27.63■■■□□ 2.01
GPN3-205ENST00000547323 FAM9BQ8IZU0 186 aa27.63■■■□□ 2.01
GPN3-205ENST00000547323 RUNDC1Q96C34 613 aa27.63■■■□□ 2.01
GPN3-205ENST00000547323 DCAF5Q96JK2 942 aa27.63■■■□□ 2.01
GPN3-205ENST00000547323 BCL11BQ9C0K0 894 aaPredicted RBP27.63■■■□□ 2.01
GPN3-205ENST00000547323 DLG5Q8TDM6 1919 aa27.63■■■□□ 2.01
GPN3-205ENST00000547323 TNS1Q9HBL0 1735 aaKnown RBP27.62■■■□□ 2.01
GPN3-205ENST00000547323 HSP90AB1P08238 724 aaKnown RBP27.62■■■□□ 2.01
GPN3-205ENST00000547323 SCN11AQ9UI33 1791 aa27.61■■■□□ 2.01
GPN3-205ENST00000547323 GNAT3A8MTJ3 354 aa27.61■■■□□ 2.01
GPN3-205ENST00000547323 NFE2L2Q16236 605 aa27.61■■■□□ 2.01
GPN3-205ENST00000547323 MAP3K5Q99683 1374 aa27.6■■■□□ 2.01
GPN3-205ENST00000547323 RNMTO43148 476 aaKnown RBP27.59■■■□□ 2.01
GPN3-205ENST00000547323 CCDC125Q86Z20 511 aa27.59■■■□□ 2.01
GPN3-205ENST00000547323 IL17REQ8NFR9 667 aa27.59■■■□□ 2.01
GPN3-205ENST00000547323 RRP7AQ9Y3A4 280 aaKnown RBP27.59■■■□□ 2.01
GPN3-205ENST00000547323 BTAF1O14981 1849 aa27.58■■■□□ 2.01
GPN3-205ENST00000547323 APBA3O96018 575 aa27.58■■■□□ 2.01
GPN3-205ENST00000547323 SENP3-EIF4A1A0A087X0R7 540 aa27.57■■■□□ 2
GPN3-205ENST00000547323 ERVV-2B6SEH9 535 aa27.57■■■□□ 2
GPN3-205ENST00000547323 TMPOP42166 694 aaKnown RBP27.57■■■□□ 2
GPN3-205ENST00000547323 APAF1O14727 1248 aa27.56■■■□□ 2
GPN3-205ENST00000547323 SF3B2Q13435 895 aaKnown RBP27.56■■■□□ 2
GPN3-205ENST00000547323 DCTN1Q14203 1278 aa27.56■■■□□ 2
GPN3-205ENST00000547323 DEFB132Q7Z7B7 95 aa27.56■■■□□ 2
GPN3-205ENST00000547323 PIGBQ92521 554 aa27.56■■■□□ 2
GPN3-205ENST00000547323 ADAMTS7Q9UKP4 1686 aa27.56■■■□□ 2
GPN3-205ENST00000547323 NEUROD2Q15784 382 aa27.55■■■□□ 2
GPN3-205ENST00000547323 RIPK4P57078 832 aa27.54■■■□□ 2
GPN3-205ENST00000547323 CABP4P57796 275 aa27.54■■■□□ 2
GPN3-205ENST00000547323 MCM10Q7L590 875 aa27.54■■■□□ 2
GPN3-205ENST00000547323 NFATC2IPQ8NCF5 419 aa27.54■■■□□ 2
GPN3-205ENST00000547323 TMOD3Q9NYL9 352 aa27.54■■■□□ 2
GPN3-205ENST00000547323 EN1Q05925 392 aaPredicted RBP27.53■■■□□ 2
GPN3-205ENST00000547323 RTF1Q92541 710 aaKnown RBP27.52■■■□□ 2
GPN3-205ENST00000547323 HTATSF1O43719 755 aaKnown RBP27.51■■□□□ 1.99
GPN3-205ENST00000547323 BAG6P46379 1132 aa27.5■■□□□ 1.99
GPN3-205ENST00000547323 THUMPD2Q9BTF0 503 aaKnown RBP27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms