RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 TSGA10IPQ3SY00 556 aa12.04□□□□□ -0.48
CPNE8-204ENST00000546603 SIRT1Q96EB6 747 aa12.04□□□□□ -0.48
CPNE8-204ENST00000546603 INSM2Q96T92 566 aaPredicted RBP12.04□□□□□ -0.48
CPNE8-204ENST00000546603 GTF3C3Q9Y5Q9 886 aa12.04□□□□□ -0.48
CPNE8-204ENST00000546603 TRAK2O60296 914 aa12.03□□□□□ -0.48
CPNE8-204ENST00000546603 OSBPL3Q9H4L5 887 aa12.03□□□□□ -0.48
CPNE8-204ENST00000546603 HDGFL1Q5TGJ6 251 aa12.02□□□□□ -0.49
CPNE8-204ENST00000546603 PLPP7Q8NBV4 271 aa12.02□□□□□ -0.49
CPNE8-204ENST00000546603 POLMQ9NP87 494 aaPredicted RBP12.02□□□□□ -0.49
CPNE8-204ENST00000546603 CTSOP43234 321 aaPredicted RBP12.01□□□□□ -0.49
CPNE8-204ENST00000546603 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.01□□□□□ -0.49
CPNE8-204ENST00000546603 NFATC2IPQ8NCF5 419 aa12.01□□□□□ -0.49
CPNE8-204ENST00000546603 DNMT3LQ9UJW3 386 aa12.01□□□□□ -0.49
CPNE8-204ENST00000546603 SOBPA7XYQ1 873 aa12□□□□□ -0.49
CPNE8-204ENST00000546603 OXLD1Q5BKU9 147 aa12□□□□□ -0.49
CPNE8-204ENST00000546603 A0A1W2PRU2 124 aa11.99□□□□□ -0.49
CPNE8-204ENST00000546603 FIGNL2A6NMB9 653 aa11.99□□□□□ -0.49
CPNE8-204ENST00000546603 GNRH1P01148 92 aa11.99□□□□□ -0.49
CPNE8-204ENST00000546603 ADAMTS19Q8TE59 1207 aa11.99□□□□□ -0.49
CPNE8-204ENST00000546603 PIK3CDO00329 1044 aa11.98□□□□□ -0.49
CPNE8-204ENST00000546603 LZTS3O60299 673 aaPredicted RBP11.98□□□□□ -0.49
CPNE8-204ENST00000546603 SKIP12755 728 aa11.98□□□□□ -0.49
CPNE8-204ENST00000546603 NXF1Q9UBU9 619 aaKnown RBP11.98□□□□□ -0.49
CPNE8-204ENST00000546603 MEN1O00255 615 aa11.97□□□□□ -0.49
CPNE8-204ENST00000546603 TERTO14746 1132 aaKnown RBP11.96□□□□□ -0.49
CPNE8-204ENST00000546603 RNF144AP50876 292 aaPredicted RBP11.96□□□□□ -0.49
CPNE8-204ENST00000546603 CLN3Q13286 438 aa11.96□□□□□ -0.49
CPNE8-204ENST00000546603 NPAS3Q8IXF0 933 aa11.96□□□□□ -0.49
CPNE8-204ENST00000546603 RNF217Q8TC41 542 aa11.96□□□□□ -0.49
CPNE8-204ENST00000546603 NLRP3Q96P20 1036 aa11.96□□□□□ -0.49
CPNE8-204ENST00000546603 GPC1P35052 558 aa11.95□□□□□ -0.5
CPNE8-204ENST00000546603 GLMNQ92990 594 aa11.95□□□□□ -0.5
CPNE8-204ENST00000546603 ARHGEF10LQ9HCE6 1279 aa11.95□□□□□ -0.5
CPNE8-204ENST00000546603 EML3Q32P44 896 aa11.94□□□□□ -0.5
CPNE8-204ENST00000546603 FOXD4L5Q5VV16 416 aaPredicted RBP11.94□□□□□ -0.5
CPNE8-204ENST00000546603 TREML4Q6UXN2 200 aa11.94□□□□□ -0.5
CPNE8-204ENST00000546603 ESCO1Q5FWF5 840 aa11.93□□□□□ -0.5
CPNE8-204ENST00000546603 SLC16A10Q8TF71 515 aa11.93□□□□□ -0.5
CPNE8-204ENST00000546603 LYSMD3Q7Z3D4 306 aa11.92□□□□□ -0.5
CPNE8-204ENST00000546603 CALR3Q96L12 384 aaKnown RBP11.92□□□□□ -0.5
CPNE8-204ENST00000546603 ESYT1Q9BSJ8 1104 aa11.92□□□□□ -0.5
CPNE8-204ENST00000546603 USP17L5A8MUK1 530 aa11.91□□□□□ -0.5
CPNE8-204ENST00000546603 WFS1O76024 890 aa11.91□□□□□ -0.5
CPNE8-204ENST00000546603 NFX1Q12986 1120 aaKnown RBP11.91□□□□□ -0.5
CPNE8-204ENST00000546603 CNKSR1Q969H4 720 aa11.91□□□□□ -0.5
CPNE8-204ENST00000546603 UCN2Q96RP3 112 aa11.91□□□□□ -0.5
CPNE8-204ENST00000546603 NOD1Q9Y239 953 aa11.91□□□□□ -0.5
CPNE8-204ENST00000546603 PTSQ03393 145 aa11.9□□□□□ -0.5
CPNE8-204ENST00000546603 NCOA4Q13772 614 aa11.9□□□□□ -0.5
CPNE8-204ENST00000546603 SLC27A3Q5K4L6 730 aa11.9□□□□□ -0.5
CPNE8-204ENST00000546603 XAGE2Q96GT9 111 aa11.9□□□□□ -0.5
CPNE8-204ENST00000546603 ZMYND15Q9H091 742 aa11.9□□□□□ -0.5
CPNE8-204ENST00000546603 RAB6BQ9NRW1 208 aa11.9□□□□□ -0.5
CPNE8-204ENST00000546603 ATP9BO43861 1147 aa11.89□□□□□ -0.51
CPNE8-204ENST00000546603 TBC1D9Q6ZT07 1266 aa11.89□□□□□ -0.51
CPNE8-204ENST00000546603 H3BM21 787 aa11.88□□□□□ -0.51
CPNE8-204ENST00000546603 IL2RAP01589 272 aa11.88□□□□□ -0.51
CPNE8-204ENST00000546603 PRICKLE2Q7Z3G6 844 aa11.88□□□□□ -0.51
CPNE8-204ENST00000546603 PLEKHM2Q8IWE5 1019 aa11.88□□□□□ -0.51
CPNE8-204ENST00000546603 GRIP2Q9C0E4 1043 aa11.88□□□□□ -0.51
CPNE8-204ENST00000546603 DEPDC4Q8N2C3 294 aa11.87□□□□□ -0.51
CPNE8-204ENST00000546603 ZNF777Q9ULD5 760 aaPredicted RBP11.87□□□□□ -0.51
CPNE8-204ENST00000546603 PPFIA3O75145 1194 aa11.86□□□□□ -0.51
CPNE8-204ENST00000546603 VEGFBP49765 207 aa11.86□□□□□ -0.51
CPNE8-204ENST00000546603 CENPCQ03188 943 aa11.86□□□□□ -0.51
CPNE8-204ENST00000546603 ETNK1Q9HBU6 452 aa11.86□□□□□ -0.51
CPNE8-204ENST00000546603 PCDHGA11Q9Y5H2 935 aa11.86□□□□□ -0.51
CPNE8-204ENST00000546603 USP17L3A6NCW0 530 aa11.85□□□□□ -0.51
CPNE8-204ENST00000546603 USP17L4A6NCW7 530 aa11.85□□□□□ -0.51
CPNE8-204ENST00000546603 USP17L2Q6R6M4 530 aa11.85□□□□□ -0.51
CPNE8-204ENST00000546603 USP17L1Q7RTZ2 530 aa11.85□□□□□ -0.51
CPNE8-204ENST00000546603 TRIM50Q86XT4 487 aa11.85□□□□□ -0.51
CPNE8-204ENST00000546603 CCDC155Q8N6L0 562 aa11.85□□□□□ -0.51
CPNE8-204ENST00000546603 HRH3Q9Y5N1 445 aa11.85□□□□□ -0.51
CPNE8-204ENST00000546603 SLC35F4A4IF30 521 aa11.84□□□□□ -0.51
CPNE8-204ENST00000546603 INHAP05111 366 aa11.84□□□□□ -0.51
CPNE8-204ENST00000546603 GDF10P55107 478 aa11.84□□□□□ -0.51
CPNE8-204ENST00000546603 GTF2IP78347 998 aa11.84□□□□□ -0.51
CPNE8-204ENST00000546603 LCE2AQ5TA79 106 aaPredicted RBP11.84□□□□□ -0.51
CPNE8-204ENST00000546603 IRF7Q92985 503 aa11.84□□□□□ -0.51
CPNE8-204ENST00000546603 TFIP11Q9UBB9 837 aaKnown RBP11.84□□□□□ -0.51
CPNE8-204ENST00000546603 WASLO00401 505 aaPredicted RBP11.83□□□□□ -0.52
CPNE8-204ENST00000546603 GTF2E1P29083 439 aaPredicted RBP11.83□□□□□ -0.52
CPNE8-204ENST00000546603 SCNN1DP51172 638 aa11.83□□□□□ -0.52
CPNE8-204ENST00000546603 WDR44Q5JSH3 913 aa11.83□□□□□ -0.52
CPNE8-204ENST00000546603 ZSCAN10Q96SZ4 725 aaPredicted RBP11.83□□□□□ -0.52
CPNE8-204ENST00000546603 SPATA31C2B4DYI2 1134 aa11.82□□□□□ -0.52
CPNE8-204ENST00000546603 STAU1O95793 577 aaKnown RBP11.82□□□□□ -0.52
CPNE8-204ENST00000546603 PPP1R12CQ9BZL4 782 aa11.82□□□□□ -0.52
CPNE8-204ENST00000546603 PALM3A6NDB9 673 aaPredicted RBP11.81□□□□□ -0.52
CPNE8-204ENST00000546603 RHOQP17081 205 aa11.81□□□□□ -0.52
CPNE8-204ENST00000546603 ATP1A2P50993 1020 aa11.81□□□□□ -0.52
CPNE8-204ENST00000546603 PSME1Q06323 249 aa11.81□□□□□ -0.52
CPNE8-204ENST00000546603 POU4F2Q12837 409 aa11.81□□□□□ -0.52
CPNE8-204ENST00000546603 FHDC1Q9C0D6 1143 aaPredicted RBP11.81□□□□□ -0.52
CPNE8-204ENST00000546603 MAFBQ9Y5Q3 323 aaPredicted RBP11.81□□□□□ -0.52
CPNE8-204ENST00000546603 SENP3-EIF4A1A0A087X0R7 540 aa11.8□□□□□ -0.52
CPNE8-204ENST00000546603 TLR1Q15399 786 aa11.8□□□□□ -0.52
CPNE8-204ENST00000546603 TMEM214Q6NUQ4 689 aaKnown RBP11.8□□□□□ -0.52
CPNE8-204ENST00000546603 NBPF10Q6P3W6 841 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms