RNA–Protein interactions for RNA: ENST00000544257.5

RIMKLB-212, Transcript of ribosomal modification protein rimK like family member B, humanhuman

TSL 1 (best)

Gene RIMKLB, Length 1,589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLB-212ENST00000544257 WASHC2AQ641Q2 1341 aa13.32□□□□□ -0.28
RIMKLB-212ENST00000544257 GLI3P10071 1580 aa13.31□□□□□ -0.28
RIMKLB-212ENST00000544257 COL5A2P05997 1499 aaPredicted RBP13.31□□□□□ -0.28
RIMKLB-212ENST00000544257 NSD2O96028 1365 aa13.31□□□□□ -0.28
RIMKLB-212ENST00000544257 LTN1O94822 1766 aa13.3□□□□□ -0.28
RIMKLB-212ENST00000544257 ANKRD26Q9UPS8 1709 aa13.3□□□□□ -0.28
RIMKLB-212ENST00000544257 GGNBP2Q9H3C7 697 aa13.3□□□□□ -0.28
RIMKLB-212ENST00000544257 IER5LQ5T953 404 aa13.29□□□□□ -0.28
RIMKLB-212ENST00000544257 SPATA31A5Q5VU36 1347 aa13.29□□□□□ -0.28
RIMKLB-212ENST00000544257 SPATA31A7Q8IWB4 1347 aa13.29□□□□□ -0.28
RIMKLB-212ENST00000544257 SOX12O15370 315 aa13.28□□□□□ -0.28
RIMKLB-212ENST00000544257 SEC24BO95487 1268 aa13.28□□□□□ -0.28
RIMKLB-212ENST00000544257 RGS12O14924 1447 aa13.28□□□□□ -0.28
RIMKLB-212ENST00000544257 RTL1A6NKG5 1358 aa13.28□□□□□ -0.28
RIMKLB-212ENST00000544257 KIF24Q5T7B8 1368 aa13.28□□□□□ -0.28
RIMKLB-212ENST00000544257 BLMP54132 1417 aaPredicted RBP13.28□□□□□ -0.28
RIMKLB-212ENST00000544257 ONECUT3O60422 494 aaPredicted RBP13.28□□□□□ -0.28
RIMKLB-212ENST00000544257 EVA1CP58658 441 aa13.28□□□□□ -0.28
RIMKLB-212ENST00000544257 POTEFA5A3E0 1075 aa13.27□□□□□ -0.29
RIMKLB-212ENST00000544257 AXIN2Q9Y2T1 843 aa13.27□□□□□ -0.29
RIMKLB-212ENST00000544257 KNSTRNQ9Y448 316 aa13.27□□□□□ -0.29
RIMKLB-212ENST00000544257 SPATA31A1Q5TZJ5 1347 aa13.27□□□□□ -0.29
RIMKLB-212ENST00000544257 CRB1P82279 1406 aa13.26□□□□□ -0.29
RIMKLB-212ENST00000544257 ZBTB7CA1YPR0 619 aa13.26□□□□□ -0.29
RIMKLB-212ENST00000544257 PER1O15534 1290 aaPredicted RBP13.26□□□□□ -0.29
RIMKLB-212ENST00000544257 STRN4Q9NRL3 753 aa13.26□□□□□ -0.29
RIMKLB-212ENST00000544257 CCDC9Q9Y3X0 531 aaKnown RBP13.26□□□□□ -0.29
RIMKLB-212ENST00000544257 MAP3K19Q56UN5 1328 aa13.26□□□□□ -0.29
RIMKLB-212ENST00000544257 WDR17Q8IZU2 1322 aa13.26□□□□□ -0.29
RIMKLB-212ENST00000544257 RGPD5Q99666 1765 aa13.25□□□□□ -0.29
RIMKLB-212ENST00000544257 PSEN1P49768 467 aa13.25□□□□□ -0.29
RIMKLB-212ENST00000544257 LARP1Q6PKG0 1096 aaKnown RBP13.25□□□□□ -0.29
RIMKLB-212ENST00000544257 IP6K1Q92551 441 aa13.25□□□□□ -0.29
RIMKLB-212ENST00000544257 COLQQ9Y215 455 aaPredicted RBP13.25□□□□□ -0.29
RIMKLB-212ENST00000544257 THRAP3Q9Y2W1 955 aaKnown RBP13.25□□□□□ -0.29
RIMKLB-212ENST00000544257 NPC1L1Q9UHC9 1359 aa13.25□□□□□ -0.29
RIMKLB-212ENST00000544257 AMER1Q5JTC6 1135 aaPredicted RBP13.24□□□□□ -0.29
RIMKLB-212ENST00000544257 BARGINQ6ZT62 677 aa13.24□□□□□ -0.29
RIMKLB-212ENST00000544257 THSD7AQ9UPZ6 1657 aa13.24□□□□□ -0.29
RIMKLB-212ENST00000544257 FAM208AQ9UK61 1670 aaKnown RBP13.24□□□□□ -0.29
RIMKLB-212ENST00000544257 SOCS7O14512 581 aa13.24□□□□□ -0.29
RIMKLB-212ENST00000544257 OTUD5Q96G74 571 aa13.24□□□□□ -0.29
RIMKLB-212ENST00000544257 ERBB3P21860 1342 aa13.23□□□□□ -0.29
RIMKLB-212ENST00000544257 HOXC9P31274 260 aa13.23□□□□□ -0.29
RIMKLB-212ENST00000544257 TCP11L2Q8N4U5 519 aa13.23□□□□□ -0.29
RIMKLB-212ENST00000544257 AMPHP49418 695 aa13.22□□□□□ -0.29
RIMKLB-212ENST00000544257 PDAP1Q13442 181 aaKnown RBP13.22□□□□□ -0.29
RIMKLB-212ENST00000544257 CARD10Q9BWT7 1032 aa13.22□□□□□ -0.29
RIMKLB-212ENST00000544257 FLT4P35916 1363 aa13.22□□□□□ -0.29
RIMKLB-212ENST00000544257 RRS1Q15050 365 aaKnown RBP13.21□□□□□ -0.29
RIMKLB-212ENST00000544257 FAM98CQ17RN3 349 aaKnown RBP13.21□□□□□ -0.29
RIMKLB-212ENST00000544257 TOM1L2Q6ZVM7 507 aa13.21□□□□□ -0.29
RIMKLB-212ENST00000544257 SMG6Q86US8 1419 aaKnown RBP13.21□□□□□ -0.29
RIMKLB-212ENST00000544257 SEPT12Q8IYM1 358 aa13.21□□□□□ -0.29
RIMKLB-212ENST00000544257 PEAK1Q9H792 1746 aa13.21□□□□□ -0.29
RIMKLB-212ENST00000544257 INSRP06213 1382 aa13.2□□□□□ -0.3
RIMKLB-212ENST00000544257 POTEJP0CG39 1038 aa13.2□□□□□ -0.3
RIMKLB-212ENST00000544257 CSB-PGBD3P0DP91 1061 aa13.2□□□□□ -0.3
RIMKLB-212ENST00000544257 FBLN1P23142 703 aa13.2□□□□□ -0.3
RIMKLB-212ENST00000544257 ANKRD24Q8TF21 1146 aa13.2□□□□□ -0.3
RIMKLB-212ENST00000544257 WNK3Q9BYP7 1800 aa13.2□□□□□ -0.3
RIMKLB-212ENST00000544257 GOLGA2Q08379 1002 aa13.2□□□□□ -0.3
RIMKLB-212ENST00000544257 MORC1Q86VD1 984 aa13.2□□□□□ -0.3
RIMKLB-212ENST00000544257 CDCA7Q9BWT1 371 aaPredicted RBP13.2□□□□□ -0.3
RIMKLB-212ENST00000544257 MAP2P11137 1827 aaKnown RBP13.19□□□□□ -0.3
RIMKLB-212ENST00000544257 PARP4Q9UKK3 1724 aaKnown RBP13.19□□□□□ -0.3
RIMKLB-212ENST00000544257 BRWD3Q6RI45 1802 aa13.19□□□□□ -0.3
RIMKLB-212ENST00000544257 PLCG2P16885 1265 aa13.19□□□□□ -0.3
RIMKLB-212ENST00000544257 POLKQ9UBT6 870 aa13.19□□□□□ -0.3
RIMKLB-212ENST00000544257 MAMSTRQ6ZN01 415 aa13.18□□□□□ -0.3
RIMKLB-212ENST00000544257 USP35Q9P2H5 1018 aa13.18□□□□□ -0.3
RIMKLB-212ENST00000544257 EMILIN1Q9Y6C2 1016 aa13.18□□□□□ -0.3
RIMKLB-212ENST00000544257 DISP2A7MBM2 1401 aa13.18□□□□□ -0.3
RIMKLB-212ENST00000544257 IRX5P78411 483 aaPredicted RBP13.16□□□□□ -0.3
RIMKLB-212ENST00000544257 HSP90AB2PQ58FF8 381 aa13.16□□□□□ -0.3
RIMKLB-212ENST00000544257 KRT27Q7Z3Y8 459 aa13.16□□□□□ -0.3
RIMKLB-212ENST00000544257 NLRP2Q9NX02 1062 aa13.16□□□□□ -0.3
RIMKLB-212ENST00000544257 A0A0G2JS52 829 aa13.15□□□□□ -0.3
RIMKLB-212ENST00000544257 MYT1Q01538 1121 aa13.15□□□□□ -0.3
RIMKLB-212ENST00000544257 LRRC37A3O60309 1634 aa13.15□□□□□ -0.3
RIMKLB-212ENST00000544257 TNNT2P45379 298 aaPredicted RBP13.15□□□□□ -0.3
RIMKLB-212ENST00000544257 CC2D1BQ5T0F9 858 aaKnown RBP13.15□□□□□ -0.3
RIMKLB-212ENST00000544257 NCAPD2Q15021 1401 aa13.14□□□□□ -0.31
RIMKLB-212ENST00000544257 MKRN3Q13064 507 aaKnown RBP13.14□□□□□ -0.31
RIMKLB-212ENST00000544257 LTV1Q96GA3 475 aaPredicted RBP13.14□□□□□ -0.31
RIMKLB-212ENST00000544257 SCUBE2Q9NQ36 999 aa13.14□□□□□ -0.31
RIMKLB-212ENST00000544257 PPM1GO15355 546 aaPredicted RBP13.13□□□□□ -0.31
RIMKLB-212ENST00000544257 RGPD2P0DJD1 1756 aa13.12□□□□□ -0.31
RIMKLB-212ENST00000544257 IL2RBP14784 551 aa13.12□□□□□ -0.31
RIMKLB-212ENST00000544257 DDB1Q16531 1140 aa13.12□□□□□ -0.31
RIMKLB-212ENST00000544257 OCEL1Q9H607 264 aa13.12□□□□□ -0.31
RIMKLB-212ENST00000544257 TNS2Q63HR2 1409 aa13.12□□□□□ -0.31
RIMKLB-212ENST00000544257 PDE3BQ13370 1112 aa13.11□□□□□ -0.31
RIMKLB-212ENST00000544257 NBPF6Q5VWK0 638 aa13.11□□□□□ -0.31
RIMKLB-212ENST00000544257 CCDC125Q86Z20 511 aa13.11□□□□□ -0.31
RIMKLB-212ENST00000544257 UPF1Q92900 1129 aaKnown RBP eCLIP13.11□□□□□ -0.31
RIMKLB-212ENST00000544257 RNF25Q96BH1 459 aaPredicted RBP13.11□□□□□ -0.31
RIMKLB-212ENST00000544257 NBPF4Q96M43 638 aa13.11□□□□□ -0.31
RIMKLB-212ENST00000544257 PLEKHG2Q9H7P9 1386 aa13.11□□□□□ -0.31
RIMKLB-212ENST00000544257 RIOK3O14730 519 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms