RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 RPIAP49247 311 aa6.46□□□□□ -1.37
SCFD1-207ENST00000544052 DNAAF2Q9NVR5 837 aaKnown RBP6.46□□□□□ -1.37
SCFD1-207ENST00000544052 NOD1Q9Y239 953 aa6.46□□□□□ -1.37
SCFD1-207ENST00000544052 DKK1O94907 266 aa6.46□□□□□ -1.38
SCFD1-207ENST00000544052 SSFA2P28290 1259 aa6.46□□□□□ -1.38
SCFD1-207ENST00000544052 RAB15P59190 212 aa6.46□□□□□ -1.38
SCFD1-207ENST00000544052 FOXD4L5Q5VV16 416 aaPredicted RBP6.46□□□□□ -1.38
SCFD1-207ENST00000544052 FOXD4L4Q8WXT5 416 aaPredicted RBP6.46□□□□□ -1.38
SCFD1-207ENST00000544052 ZNF775Q96BV0 537 aaPredicted RBP6.46□□□□□ -1.38
SCFD1-207ENST00000544052 LGR5O75473 907 aa6.45□□□□□ -1.38
SCFD1-207ENST00000544052 NBPF20Q3BBV1 942 aa6.45□□□□□ -1.38
SCFD1-207ENST00000544052 C1QTNF2Q9BXJ5 285 aa6.45□□□□□ -1.38
SCFD1-207ENST00000544052 GTF2IP78347 998 aa6.45□□□□□ -1.38
SCFD1-207ENST00000544052 TRIM32Q13049 653 aa6.45□□□□□ -1.38
SCFD1-207ENST00000544052 PKD2L1Q9P0L9 805 aa6.45□□□□□ -1.38
SCFD1-207ENST00000544052 ESPNB1AK53 854 aa6.44□□□□□ -1.38
SCFD1-207ENST00000544052 ZBTB24O43167 697 aaPredicted RBP6.44□□□□□ -1.38
SCFD1-207ENST00000544052 RANGAP1P46060 587 aaPredicted RBP6.44□□□□□ -1.38
SCFD1-207ENST00000544052 ATP1A2P50993 1020 aa6.44□□□□□ -1.38
SCFD1-207ENST00000544052 SKOR1P84550 965 aa6.44□□□□□ -1.38
SCFD1-207ENST00000544052 FOXC1Q12948 553 aa6.44□□□□□ -1.38
SCFD1-207ENST00000544052 TRIM50Q86XT4 487 aa6.44□□□□□ -1.38
SCFD1-207ENST00000544052 LARGE2Q8N3Y3 721 aa6.44□□□□□ -1.38
SCFD1-207ENST00000544052 GNEQ9Y223 722 aaKnown RBP6.44□□□□□ -1.38
SCFD1-207ENST00000544052 PCDHB11Q9Y5F2 797 aa6.44□□□□□ -1.38
SCFD1-207ENST00000544052 CD2BP2O95400 341 aaKnown RBP6.43□□□□□ -1.38
SCFD1-207ENST00000544052 RNF20Q5VTR2 975 aa6.43□□□□□ -1.38
SCFD1-207ENST00000544052 CCDC102BQ68D86 513 aa6.43□□□□□ -1.38
SCFD1-207ENST00000544052 TXNDC2Q86VQ3 553 aa6.43□□□□□ -1.38
SCFD1-207ENST00000544052 TPCN2Q8NHX9 752 aa6.43□□□□□ -1.38
SCFD1-207ENST00000544052 CLP1Q92989 425 aaKnown RBP6.43□□□□□ -1.38
SCFD1-207ENST00000544052 PCDHGA11Q9Y5H2 935 aa6.43□□□□□ -1.38
SCFD1-207ENST00000544052 SFI1A8K8P3 1242 aa6.43□□□□□ -1.38
SCFD1-207ENST00000544052 B4GALNT3Q6L9W6 998 aa6.43□□□□□ -1.38
SCFD1-207ENST00000544052 SND1Q7KZF4 910 aaKnown RBP eCLIP6.43□□□□□ -1.38
SCFD1-207ENST00000544052 TRMT44Q8IYL2 757 aaKnown RBP6.43□□□□□ -1.38
SCFD1-207ENST00000544052 SIX5Q8N196 739 aa6.43□□□□□ -1.38
SCFD1-207ENST00000544052 ZNF428Q96B54 188 aa6.43□□□□□ -1.38
SCFD1-207ENST00000544052 KCTD15Q96SI1 283 aaPredicted RBP6.43□□□□□ -1.38
SCFD1-207ENST00000544052 PRMT3O60678 531 aa6.42□□□□□ -1.38
SCFD1-207ENST00000544052 ATP2B4P23634 1241 aa6.42□□□□□ -1.38
SCFD1-207ENST00000544052 PSME1Q06323 249 aa6.42□□□□□ -1.38
SCFD1-207ENST00000544052 CCDC27Q2M243 656 aa6.42□□□□□ -1.38
SCFD1-207ENST00000544052 SCTRP47872 440 aa6.41□□□□□ -1.38
SCFD1-207ENST00000544052 USP4Q13107 963 aa6.41□□□□□ -1.38
SCFD1-207ENST00000544052 AAASQ9NRG9 546 aa6.41□□□□□ -1.38
SCFD1-207ENST00000544052 SERPINB4P48594 390 aa6.41□□□□□ -1.38
SCFD1-207ENST00000544052 SEC13P55735 322 aa6.41□□□□□ -1.38
SCFD1-207ENST00000544052 SWI5Q1ZZU3 235 aa6.41□□□□□ -1.38
SCFD1-207ENST00000544052 CCER1Q8TC90 406 aaPredicted RBP6.41□□□□□ -1.38
SCFD1-207ENST00000544052 PRIMPOLQ96LW4 560 aa6.41□□□□□ -1.38
SCFD1-207ENST00000544052 POTECB2RU33 542 aa6.4□□□□□ -1.38
SCFD1-207ENST00000544052 ST8SIA5O15466 376 aa6.4□□□□□ -1.38
SCFD1-207ENST00000544052 ARID5BQ14865 1188 aa6.4□□□□□ -1.38
SCFD1-207ENST00000544052 INTS6LQ5JSJ4 861 aaKnown RBP6.4□□□□□ -1.38
SCFD1-207ENST00000544052 VASH1Q7L8A9 365 aaPredicted RBP6.4□□□□□ -1.38
SCFD1-207ENST00000544052 SEPT12Q8IYM1 358 aa6.4□□□□□ -1.38
SCFD1-207ENST00000544052 ERVH48-1M5A8F1 160 aa6.4□□□□□ -1.39
SCFD1-207ENST00000544052 VARSP26640 1264 aaKnown RBP6.4□□□□□ -1.39
SCFD1-207ENST00000544052 ARID4AP29374 1257 aaPredicted RBP6.4□□□□□ -1.39
SCFD1-207ENST00000544052 CYP4X1Q8N118 509 aa6.4□□□□□ -1.39
SCFD1-207ENST00000544052 CRIPAKQ8N1N5 446 aa6.4□□□□□ -1.39
SCFD1-207ENST00000544052 GAS2L2Q8NHY3 880 aa6.4□□□□□ -1.39
SCFD1-207ENST00000544052 TOR4AQ9NXH8 423 aa6.4□□□□□ -1.39
SCFD1-207ENST00000544052 STAU1O95793 577 aaKnown RBP6.39□□□□□ -1.39
SCFD1-207ENST00000544052 OCLNQ16625 522 aa6.39□□□□□ -1.39
SCFD1-207ENST00000544052 TSEN2Q8NCE0 465 aaKnown RBP6.39□□□□□ -1.39
SCFD1-207ENST00000544052 CDV3Q9UKY7 258 aaKnown RBP6.39□□□□□ -1.39
SCFD1-207ENST00000544052 AVPP01185 164 aa6.38□□□□□ -1.39
SCFD1-207ENST00000544052 WNT7BP56706 349 aa6.38□□□□□ -1.39
SCFD1-207ENST00000544052 EHBP1Q8NDI1 1231 aa6.38□□□□□ -1.39
SCFD1-207ENST00000544052 SIRT1Q96EB6 747 aa6.38□□□□□ -1.39
SCFD1-207ENST00000544052 HINFPQ9BQA5 517 aa6.38□□□□□ -1.39
SCFD1-207ENST00000544052 RBM19Q9Y4C8 960 aaKnown RBP6.38□□□□□ -1.39
SCFD1-207ENST00000544052 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.38□□□□□ -1.39
SCFD1-207ENST00000544052 TMPRSS4Q9NRS4 437 aa6.38□□□□□ -1.39
SCFD1-207ENST00000544052 TLL2Q9Y6L7 1015 aa6.38□□□□□ -1.39
SCFD1-207ENST00000544052 GRM5P41594 1212 aa6.37□□□□□ -1.39
SCFD1-207ENST00000544052 CTC1Q2NKJ3 1217 aa6.37□□□□□ -1.39
SCFD1-207ENST00000544052 RC3H1Q5TC82 1133 aaKnown RBP6.37□□□□□ -1.39
SCFD1-207ENST00000544052 MAP4K5Q9Y4K4 846 aa6.37□□□□□ -1.39
SCFD1-207ENST00000544052 FSHRP23945 695 aa6.37□□□□□ -1.39
SCFD1-207ENST00000544052 CAPN12Q6ZSI9 719 aa6.37□□□□□ -1.39
SCFD1-207ENST00000544052 CXXC1Q9P0U4 656 aaPredicted RBP6.37□□□□□ -1.39
SCFD1-207ENST00000544052 MYCP01106 439 aaPredicted RBP6.36□□□□□ -1.39
SCFD1-207ENST00000544052 PURBQ96QR8 312 aaKnown RBP6.36□□□□□ -1.39
SCFD1-207ENST00000544052 TTC24A2A3L6 582 aaPredicted RBP6.35□□□□□ -1.39
SCFD1-207ENST00000544052 AXIN1O15169 862 aa6.35□□□□□ -1.39
SCFD1-207ENST00000544052 RBM25P49756 843 aaKnown RBP6.35□□□□□ -1.39
SCFD1-207ENST00000544052 ERVK-9P63128 1117 aa6.35□□□□□ -1.39
SCFD1-207ENST00000544052 CDK15Q96Q40 435 aa6.35□□□□□ -1.39
SCFD1-207ENST00000544052 MKNK1Q9BUB5 465 aa6.35□□□□□ -1.39
SCFD1-207ENST00000544052 CYLDQ9NQC7 956 aa6.35□□□□□ -1.39
SCFD1-207ENST00000544052 SOWAHDA6NJG2 315 aa6.35□□□□□ -1.39
SCFD1-207ENST00000544052 TMEM229AB2RXF0 380 aa6.35□□□□□ -1.39
SCFD1-207ENST00000544052 WNT7AO00755 349 aa6.35□□□□□ -1.39
SCFD1-207ENST00000544052 TAS1R3Q7RTX0 852 aa6.35□□□□□ -1.39
SCFD1-207ENST00000544052 C1orf216Q8TAB5 229 aa6.35□□□□□ -1.39
SCFD1-207ENST00000544052 OSBPL3Q9H4L5 887 aa6.35□□□□□ -1.39
SCFD1-207ENST00000544052 ANO2Q9NQ90 1003 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms