RNA–Protein interactions for RNA: ENST00000543079.1

PAAF1-212, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-212ENST00000543079 MADDQ8WXG6 1647 aa11.09□□□□□ -0.63
PAAF1-212ENST00000543079 DISP1Q96F81 1524 aa11.09□□□□□ -0.63
PAAF1-212ENST00000543079 GRM5P41594 1212 aa11.08□□□□□ -0.64
PAAF1-212ENST00000543079 NEUROD2Q15784 382 aa11.08□□□□□ -0.64
PAAF1-212ENST00000543079 TREML4Q6UXN2 200 aa11.08□□□□□ -0.64
PAAF1-212ENST00000543079 TRIM46Q7Z4K8 759 aa11.08□□□□□ -0.64
PAAF1-212ENST00000543079 GOLGA3Q08378 1498 aa11.07□□□□□ -0.64
PAAF1-212ENST00000543079 LOC105371045A0A1W2PR82 267 aa11.07□□□□□ -0.64
PAAF1-212ENST00000543079 AP1G2O75843 785 aa11.07□□□□□ -0.64
PAAF1-212ENST00000543079 TIMP2P16035 220 aa11.07□□□□□ -0.64
PAAF1-212ENST00000543079 WDR4P57081 412 aaKnown RBP11.07□□□□□ -0.64
PAAF1-212ENST00000543079 PDXDC2PQ6P474 469 aa11.07□□□□□ -0.64
PAAF1-212ENST00000543079 TRMT44Q8IYL2 757 aaKnown RBP11.07□□□□□ -0.64
PAAF1-212ENST00000543079 FKBPLQ9UIM3 349 aa11.07□□□□□ -0.64
PAAF1-212ENST00000543079 BCORL1Q5H9F3 1711 aa11.06□□□□□ -0.64
PAAF1-212ENST00000543079 BMP1P13497 986 aa11.06□□□□□ -0.64
PAAF1-212ENST00000543079 LCE2AQ5TA79 106 aaPredicted RBP11.06□□□□□ -0.64
PAAF1-212ENST00000543079 MAP4K5Q9Y4K4 846 aa11.06□□□□□ -0.64
PAAF1-212ENST00000543079 MAGEB6P1A0A0J9YX57 407 aa11.04□□□□□ -0.64
PAAF1-212ENST00000543079 RFC5P40937 340 aa11.04□□□□□ -0.64
PAAF1-212ENST00000543079 NR6A1Q15406 480 aa11.04□□□□□ -0.64
PAAF1-212ENST00000543079 IL27Q8NEV9 243 aa11.04□□□□□ -0.64
PAAF1-212ENST00000543079 PCMTD1Q96MG8 357 aaPredicted RBP11.04□□□□□ -0.64
PAAF1-212ENST00000543079 ZC3H4Q9UPT8 1303 aaKnown RBP11.04□□□□□ -0.64
PAAF1-212ENST00000543079 PHLDB1Q86UU1 1377 aa11.03□□□□□ -0.64
PAAF1-212ENST00000543079 YEATS2Q9ULM3 1422 aa11.03□□□□□ -0.64
PAAF1-212ENST00000543079 NR3C2P08235 984 aa11.03□□□□□ -0.64
PAAF1-212ENST00000543079 UBTFP17480 764 aaKnown RBP11.03□□□□□ -0.64
PAAF1-212ENST00000543079 MLECQ14165 292 aa11.03□□□□□ -0.64
PAAF1-212ENST00000543079 CFAP43Q8NDM7 1665 aa11.03□□□□□ -0.64
PAAF1-212ENST00000543079 RIMS1Q86UR5 1692 aaKnown RBP11.02□□□□□ -0.64
PAAF1-212ENST00000543079 MRPL14Q6P1L8 145 aaKnown RBP11.02□□□□□ -0.65
PAAF1-212ENST00000543079 VASH1Q7L8A9 365 aaPredicted RBP11.02□□□□□ -0.65
PAAF1-212ENST00000543079 ARHGAP9Q9BRR9 750 aa11.02□□□□□ -0.65
PAAF1-212ENST00000543079 ZIC2O95409 532 aaPredicted RBP11.01□□□□□ -0.65
PAAF1-212ENST00000543079 USP17L8P0C7I0 530 aa11.01□□□□□ -0.65
PAAF1-212ENST00000543079 BRPF1P55201 1214 aaPredicted RBP11.01□□□□□ -0.65
PAAF1-212ENST00000543079 NFX1Q12986 1120 aaKnown RBP11.01□□□□□ -0.65
PAAF1-212ENST00000543079 ERFEQ4G0M1 354 aa11.01□□□□□ -0.65
PAAF1-212ENST00000543079 ZFP42Q96MM3 310 aa11.01□□□□□ -0.65
PAAF1-212ENST00000543079 CARD14Q9BXL6 1004 aa11.01□□□□□ -0.65
PAAF1-212ENST00000543079 IQGAP2Q13576 1575 aa11.01□□□□□ -0.65
PAAF1-212ENST00000543079 ARID3CA6NKF2 412 aa11□□□□□ -0.65
PAAF1-212ENST00000543079 WFS1O76024 890 aa11□□□□□ -0.65
PAAF1-212ENST00000543079 ITPKCQ96DU7 683 aa11□□□□□ -0.65
PAAF1-212ENST00000543079 CEBPAP49715 358 aaPredicted RBP10.99□□□□□ -0.65
PAAF1-212ENST00000543079 SCARF1Q14162 830 aa10.99□□□□□ -0.65
PAAF1-212ENST00000543079 TMEM259Q4ZIN3 620 aa10.99□□□□□ -0.65
PAAF1-212ENST00000543079 ZFAND3Q9H8U3 227 aa10.99□□□□□ -0.65
PAAF1-212ENST00000543079 HMX1Q9NP08 348 aaPredicted RBP10.99□□□□□ -0.65
PAAF1-212ENST00000543079 GPSM3Q9Y4H4 160 aa10.99□□□□□ -0.65
PAAF1-212ENST00000543079 CTTNBP2Q8WZ74 1663 aa10.98□□□□□ -0.65
PAAF1-212ENST00000543079 FSHRP23945 695 aa10.98□□□□□ -0.65
PAAF1-212ENST00000543079 PTK2Q05397 1052 aa10.98□□□□□ -0.65
PAAF1-212ENST00000543079 EPS8L1Q8TE68 723 aa10.98□□□□□ -0.65
PAAF1-212ENST00000543079 UGGT2Q9NYU1 1516 aa10.98□□□□□ -0.65
PAAF1-212ENST00000543079 TERTO14746 1132 aaKnown RBP10.97□□□□□ -0.65
PAAF1-212ENST00000543079 TPRNQ4KMQ1 711 aa10.97□□□□□ -0.65
PAAF1-212ENST00000543079 ZBTB33Q86T24 672 aa10.97□□□□□ -0.65
PAAF1-212ENST00000543079 PNMA1Q8ND90 353 aa10.97□□□□□ -0.65
PAAF1-212ENST00000543079 CDV3Q9UKY7 258 aaKnown RBP10.97□□□□□ -0.65
PAAF1-212ENST00000543079 POGZQ7Z3K3 1410 aa10.96□□□□□ -0.65
PAAF1-212ENST00000543079 UBAP1LF5GYI3 381 aa10.96□□□□□ -0.65
PAAF1-212ENST00000543079 PURBQ96QR8 312 aaKnown RBP10.96□□□□□ -0.65
PAAF1-212ENST00000543079 OCSTAMPQ9BR26 566 aa10.96□□□□□ -0.65
PAAF1-212ENST00000543079 CCDC116Q8IYX3 515 aa10.95□□□□□ -0.66
PAAF1-212ENST00000543079 EMILIN1Q9Y6C2 1016 aa10.95□□□□□ -0.66
PAAF1-212ENST00000543079 PTPRTO14522 1441 aa10.94□□□□□ -0.66
PAAF1-212ENST00000543079 RANGAP1P46060 587 aaPredicted RBP10.94□□□□□ -0.66
PAAF1-212ENST00000543079 SLC10A4Q96EP9 437 aa10.94□□□□□ -0.66
PAAF1-212ENST00000543079 KCTD15Q96SI1 283 aaPredicted RBP10.93□□□□□ -0.66
PAAF1-212ENST00000543079 NXF1Q9UBU9 619 aaKnown RBP10.93□□□□□ -0.66
PAAF1-212ENST00000543079 NEO1Q92859 1461 aa10.93□□□□□ -0.66
PAAF1-212ENST00000543079 KIAA0556O60303 1618 aa10.92□□□□□ -0.66
PAAF1-212ENST00000543079 LTBP4Q8N2S1 1624 aa10.92□□□□□ -0.66
PAAF1-212ENST00000543079 MEIOBQ8N635 442 aa10.92□□□□□ -0.66
PAAF1-212ENST00000543079 ADAM32Q8TC27 787 aa10.92□□□□□ -0.66
PAAF1-212ENST00000543079 TRIM34Q9BYJ4 488 aa10.92□□□□□ -0.66
PAAF1-212ENST00000543079 STRCQ7RTU9 1775 aa10.92□□□□□ -0.66
PAAF1-212ENST00000543079 SAMD9Q5K651 1589 aa10.91□□□□□ -0.66
PAAF1-212ENST00000543079 FRMPD1Q5SYB0 1578 aa10.91□□□□□ -0.66
PAAF1-212ENST00000543079 NPAS3Q8IXF0 933 aa10.91□□□□□ -0.66
PAAF1-212ENST00000543079 ARHGAP35Q9NRY4 1499 aa10.91□□□□□ -0.66
PAAF1-212ENST00000543079 CEP162Q5TB80 1403 aa10.91□□□□□ -0.66
PAAF1-212ENST00000543079 AKNAQ7Z591 1439 aa10.91□□□□□ -0.66
PAAF1-212ENST00000543079 ABCA8O94911 1581 aa10.9□□□□□ -0.66
PAAF1-212ENST00000543079 FANCAO15360 1455 aa10.9□□□□□ -0.66
PAAF1-212ENST00000543079 IQSEC2Q5JU85 1478 aa10.9□□□□□ -0.66
PAAF1-212ENST00000543079 UPP2O95045 317 aa10.9□□□□□ -0.66
PAAF1-212ENST00000543079 HSPA1LP34931 641 aa10.9□□□□□ -0.66
PAAF1-212ENST00000543079 PPP1R26Q5T8A7 1209 aaPredicted RBP10.9□□□□□ -0.66
PAAF1-212ENST00000543079 CLIP1P30622 1438 aa10.9□□□□□ -0.66
PAAF1-212ENST00000543079 DENND4BO75064 1496 aaPredicted RBP10.89□□□□□ -0.67
PAAF1-212ENST00000543079 ATP10BO94823 1461 aa10.89□□□□□ -0.67
PAAF1-212ENST00000543079 WIPF1O43516 503 aa10.89□□□□□ -0.67
PAAF1-212ENST00000543079 C6orf118Q5T5N4 469 aa10.89□□□□□ -0.67
PAAF1-212ENST00000543079 LINC00528Q8N1L1 170 aa10.89□□□□□ -0.67
PAAF1-212ENST00000543079 SLC16A10Q8TF71 515 aa10.89□□□□□ -0.67
PAAF1-212ENST00000543079 PGPEP1Q9NXJ5 209 aa10.89□□□□□ -0.67
PAAF1-212ENST00000543079 EFCAB5A4FU69 1503 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms