RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 MSH5O43196 834 aa12.6□□□□□ -0.39
UBC-211ENST00000542416 MAP3K19Q56UN5 1328 aa12.6□□□□□ -0.39
UBC-211ENST00000542416 RGPD5Q99666 1765 aa12.59□□□□□ -0.39
UBC-211ENST00000542416 USP54Q70EL1 1684 aa12.59□□□□□ -0.39
UBC-211ENST00000542416 NLGN2Q8NFZ4 835 aa12.59□□□□□ -0.39
UBC-211ENST00000542416 RAPGEF4Q8WZA2 1011 aa12.59□□□□□ -0.39
UBC-211ENST00000542416 MON2Q7Z3U7 1717 aa12.59□□□□□ -0.39
UBC-211ENST00000542416 KCNQ4P56696 695 aa12.58□□□□□ -0.4
UBC-211ENST00000542416 CD2APQ9Y5K6 639 aa12.58□□□□□ -0.4
UBC-211ENST00000542416 RTL1A6NKG5 1358 aa12.57□□□□□ -0.4
UBC-211ENST00000542416 CHD4Q14839 1912 aa12.57□□□□□ -0.4
UBC-211ENST00000542416 COL23A1Q86Y22 540 aaPredicted RBP12.57□□□□□ -0.4
UBC-211ENST00000542416 BTAF1O14981 1849 aa12.57□□□□□ -0.4
UBC-211ENST00000542416 NSD2O96028 1365 aa12.56□□□□□ -0.4
UBC-211ENST00000542416 SMG6Q86US8 1419 aaKnown RBP12.56□□□□□ -0.4
UBC-211ENST00000542416 YBX3P16989 372 aaKnown RBP eCLIP12.56□□□□□ -0.41e-38■□□□□ 10
UBC-211ENST00000542416 TATP17735 454 aaPredicted RBP12.56□□□□□ -0.4
UBC-211ENST00000542416 TONSLQ96HA7 1378 aa12.56□□□□□ -0.4
UBC-211ENST00000542416 IFFO2Q5TF58 517 aa12.55□□□□□ -0.4
UBC-211ENST00000542416 NBPF6Q5VWK0 638 aa12.55□□□□□ -0.4
UBC-211ENST00000542416 SMARCC1Q92922 1105 aaPredicted RBP12.55□□□□□ -0.4
UBC-211ENST00000542416 NBPF4Q96M43 638 aa12.55□□□□□ -0.4
UBC-211ENST00000542416 PCDH11XQ9BZA7 1347 aa12.55□□□□□ -0.4
UBC-211ENST00000542416 PCDH11YQ9BZA8 1340 aa12.55□□□□□ -0.4
UBC-211ENST00000542416 KAT6BQ8WYB5 2073 aa12.54□□□□□ -0.4
UBC-211ENST00000542416 TESK2Q96S53 571 aa12.54□□□□□ -0.4
UBC-211ENST00000542416 GPBP1L1Q9HC44 474 aaPredicted RBP12.54□□□□□ -0.4
UBC-211ENST00000542416 GOLGB1Q14789 3259 aaKnown RBP12.53□□□□□ -0.4
UBC-211ENST00000542416 ST20-MTHFSA0A0A6YYL1 179 aa12.53□□□□□ -0.4
UBC-211ENST00000542416 MEGF6O75095 1541 aa12.52□□□□□ -0.4
UBC-211ENST00000542416 FAM208AQ9UK61 1670 aaKnown RBP12.52□□□□□ -0.4
UBC-211ENST00000542416 QSER1Q2KHR3 1735 aa12.52□□□□□ -0.41
UBC-211ENST00000542416 LTN1O94822 1766 aa12.52□□□□□ -0.41
UBC-211ENST00000542416 FYB1O15117 783 aa12.52□□□□□ -0.41
UBC-211ENST00000542416 RRS1Q15050 365 aaKnown RBP12.52□□□□□ -0.41
UBC-211ENST00000542416 CDCA8Q53HL2 280 aa12.52□□□□□ -0.41
UBC-211ENST00000542416 MSL1Q68DK7 614 aa12.52□□□□□ -0.41
UBC-211ENST00000542416 AK7Q96M32 723 aa12.52□□□□□ -0.41
UBC-211ENST00000542416 KIF24Q5T7B8 1368 aa12.52□□□□□ -0.41
UBC-211ENST00000542416 PALLDQ8WX93 1383 aa12.52□□□□□ -0.41
UBC-211ENST00000542416 NSD3Q9BZ95 1437 aa12.52□□□□□ -0.41
UBC-211ENST00000542416 FBLN1P23142 703 aa12.51□□□□□ -0.41
UBC-211ENST00000542416 TMF1P82094 1093 aa12.51□□□□□ -0.41
UBC-211ENST00000542416 MPRIPQ6WCQ1 1025 aa12.51□□□□□ -0.41
UBC-211ENST00000542416 INSRP06213 1382 aa12.51□□□□□ -0.41
UBC-211ENST00000542416 USHBP1Q8N6Y0 703 aa12.5□□□□□ -0.41
UBC-211ENST00000542416 GGNBP2Q9H3C7 697 aa12.5□□□□□ -0.41
UBC-211ENST00000542416 ATP10DQ9P241 1426 aa12.5□□□□□ -0.41
UBC-211ENST00000542416 COL24A1Q17RW2 1714 aa12.49□□□□□ -0.41
UBC-211ENST00000542416 FLT4P35916 1363 aa12.49□□□□□ -0.41
UBC-211ENST00000542416 HSPA6P17066 643 aa12.48□□□□□ -0.41
UBC-211ENST00000542416 SSFA2P28290 1259 aa12.48□□□□□ -0.41
UBC-211ENST00000542416 HSP90AB2PQ58FF8 381 aa12.48□□□□□ -0.41
UBC-211ENST00000542416 SPG7Q9UQ90 795 aa12.48□□□□□ -0.41
UBC-211ENST00000542416 CEP350Q5VT06 3117 aa12.48□□□□□ -0.41
UBC-211ENST00000542416 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.47□□□□□ -0.41
UBC-211ENST00000542416 CYP27B1O15528 508 aa12.47□□□□□ -0.41
UBC-211ENST00000542416 NKX1-1Q15270 411 aaPredicted RBP12.47□□□□□ -0.41
UBC-211ENST00000542416 SHANK3Q9BYB0 1731 aa12.46□□□□□ -0.41
UBC-211ENST00000542416 IGSF1Q8N6C5 1336 aa12.46□□□□□ -0.41
UBC-211ENST00000542416 PIGBQ92521 554 aa12.46□□□□□ -0.41
UBC-211ENST00000542416 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.46□□□□□ -0.41
UBC-211ENST00000542416 LY75O60449 1722 aa12.45□□□□□ -0.42
UBC-211ENST00000542416 ADCY9O60503 1353 aa12.45□□□□□ -0.42
UBC-211ENST00000542416 LOC102724428A0A0B4J2F2 783 aa12.45□□□□□ -0.42
UBC-211ENST00000542416 PHF14O94880 888 aa12.45□□□□□ -0.42
UBC-211ENST00000542416 SIK1P57059 783 aa12.45□□□□□ -0.42
UBC-211ENST00000542416 DOT1LQ8TEK3 1739 aa12.45□□□□□ -0.42
UBC-211ENST00000542416 ZNF526Q8TF50 670 aaPredicted RBP12.44□□□□□ -0.42
UBC-211ENST00000542416 TMOD3Q9NYL9 352 aa12.44□□□□□ -0.42
UBC-211ENST00000542416 GNPATO15228 680 aa12.42□□□□□ -0.42
UBC-211ENST00000542416 ATP6V1AP38606 617 aa12.42□□□□□ -0.42
UBC-211ENST00000542416 TGFB2P61812 414 aa12.42□□□□□ -0.42
UBC-211ENST00000542416 IFNL2Q8IZJ0 200 aa12.42□□□□□ -0.42
UBC-211ENST00000542416 WASHC2AQ641Q2 1341 aa12.41□□□□□ -0.42
UBC-211ENST00000542416 PPM1GO15355 546 aaPredicted RBP12.41□□□□□ -0.42
UBC-211ENST00000542416 APLP1P51693 650 aa12.41□□□□□ -0.42
UBC-211ENST00000542416 NLGN1Q8N2Q7 840 aa12.41□□□□□ -0.42
UBC-211ENST00000542416 LINC00116Q8NCU8 138 aa12.41□□□□□ -0.42
UBC-211ENST00000542416 EMILIN1Q9Y6C2 1016 aa12.41□□□□□ -0.42
UBC-211ENST00000542416 TRAPPC3LQ5T215 181 aa12.4□□□□□ -0.42
UBC-211ENST00000542416 AMIGO3Q86WK7 504 aa12.4□□□□□ -0.42
UBC-211ENST00000542416 RTCBQ9Y3I0 505 aaKnown RBP12.4□□□□□ -0.42
UBC-211ENST00000542416 PLEKHG2Q9H7P9 1386 aa12.4□□□□□ -0.42
UBC-211ENST00000542416 TUBGCP6Q96RT7 1819 aa12.39□□□□□ -0.43
UBC-211ENST00000542416 KIF3CO14782 793 aa12.39□□□□□ -0.43
UBC-211ENST00000542416 TOMM70O94826 608 aa12.39□□□□□ -0.43
UBC-211ENST00000542416 HSP90AB1P08238 724 aaKnown RBP12.39□□□□□ -0.43
UBC-211ENST00000542416 MMP10P09238 476 aa12.39□□□□□ -0.43
UBC-211ENST00000542416 ADRA2BP18089 450 aa12.39□□□□□ -0.43
UBC-211ENST00000542416 EYA1Q99502 592 aa12.39□□□□□ -0.43
UBC-211ENST00000542416 ASAP1Q9ULH1 1129 aa12.39□□□□□ -0.43
UBC-211ENST00000542416 NCAPD2Q15021 1401 aa12.38□□□□□ -0.43
UBC-211ENST00000542416 PHKG2P15735 406 aa12.38□□□□□ -0.43
UBC-211ENST00000542416 RC3H1Q5TC82 1133 aaKnown RBP12.38□□□□□ -0.43
UBC-211ENST00000542416 CARD14Q9BXL6 1004 aa12.38□□□□□ -0.43
UBC-211ENST00000542416 WWC3Q9ULE0 1092 aa12.38□□□□□ -0.43
UBC-211ENST00000542416 C5P01031 1676 aa12.38□□□□□ -0.43
UBC-211ENST00000542416 C4BP0C0L5 1744 aa12.37□□□□□ -0.43
UBC-211ENST00000542416 ERVV-2B6SEH9 535 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms