RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 DSG2Q14126 1118 aa6.22□□□□□ -1.41
SNHG1-218ENST00000541615 CCDC30Q5VVM6 783 aa6.22□□□□□ -1.41
SNHG1-218ENST00000541615 AP1ARQ63HQ0 302 aa6.22□□□□□ -1.41
SNHG1-218ENST00000541615 EP400NLQ6ZTU2 488 aa6.22□□□□□ -1.41
SNHG1-218ENST00000541615 DDX46Q7L014 1031 aaKnown RBP6.22□□□□□ -1.41
SNHG1-218ENST00000541615 MPNDQ8N594 471 aa6.22□□□□□ -1.41
SNHG1-218ENST00000541615 LSM14AQ8ND56 463 aaKnown RBP6.22□□□□□ -1.41
SNHG1-218ENST00000541615 SYAP1Q96A49 352 aaPredicted RBP6.22□□□□□ -1.41
SNHG1-218ENST00000541615 GZF1Q9H116 711 aaPredicted RBP6.22□□□□□ -1.41
SNHG1-218ENST00000541615 BCL2L12Q9HB09 334 aa6.22□□□□□ -1.41
SNHG1-218ENST00000541615 RYDENQ9NUL5 291 aaKnown RBP6.22□□□□□ -1.41
SNHG1-218ENST00000541615 ABCF2Q9UG63 623 aa6.22□□□□□ -1.41
SNHG1-218ENST00000541615 DHX29Q7Z478 1369 aaKnown RBP6.21□□□□□ -1.41
SNHG1-218ENST00000541615 TMCO5BA8MYB1 307 aa6.21□□□□□ -1.42
SNHG1-218ENST00000541615 HRO43593 1189 aa6.21□□□□□ -1.42
SNHG1-218ENST00000541615 BAG4O95429 457 aaKnown RBP6.21□□□□□ -1.42
SNHG1-218ENST00000541615 POLD1P28340 1107 aa6.21□□□□□ -1.42
SNHG1-218ENST00000541615 ABCD1P33897 745 aa6.21□□□□□ -1.42
SNHG1-218ENST00000541615 MAGEA9P43362 315 aa6.21□□□□□ -1.42
SNHG1-218ENST00000541615 ICA1Q05084 483 aa6.21□□□□□ -1.42
SNHG1-218ENST00000541615 MCM6Q14566 821 aa6.21□□□□□ -1.42
SNHG1-218ENST00000541615 ZRSR1Q15695 479 aaKnown RBP6.21□□□□□ -1.42
SNHG1-218ENST00000541615 C8orf34Q49A92 452 aa6.21□□□□□ -1.42
SNHG1-218ENST00000541615 CDCA8Q53HL2 280 aa6.21□□□□□ -1.42
SNHG1-218ENST00000541615 CXorf38Q8TB03 319 aa6.21□□□□□ -1.42
SNHG1-218ENST00000541615 PIBF1Q8WXW3 757 aa6.21□□□□□ -1.42
SNHG1-218ENST00000541615 SH3GL3Q99963 347 aa6.21□□□□□ -1.42
SNHG1-218ENST00000541615 STK26Q9P289 416 aa6.21□□□□□ -1.42
SNHG1-218ENST00000541615 CTNNA3Q9UI47 895 aa6.21□□□□□ -1.42
SNHG1-218ENST00000541615 SYNPO2Q9UMS6 1093 aa6.21□□□□□ -1.42
SNHG1-218ENST00000541615 PRDM2Q13029 1718 aa6.21□□□□□ -1.42
SNHG1-218ENST00000541615 MAPK8IP3Q9UPT6 1336 aa6.21□□□□□ -1.42
SNHG1-218ENST00000541615 PPFIA2O75334 1257 aa6.2□□□□□ -1.42
SNHG1-218ENST00000541615 HNRNPH2P55795 449 aaKnown RBP6.2□□□□□ -1.42
SNHG1-218ENST00000541615 RWDD2BP57060 319 aa6.2□□□□□ -1.42
SNHG1-218ENST00000541615 ADCY2Q08462 1091 aa6.2□□□□□ -1.42
SNHG1-218ENST00000541615 TMED1Q13445 227 aa6.2□□□□□ -1.42
SNHG1-218ENST00000541615 NOLC1Q14978 699 aaKnown RBP eCLIP6.2□□□□□ -1.426e-9■■■■■ 29.1
SNHG1-218ENST00000541615 SLFNL1Q499Z3 407 aa6.2□□□□□ -1.42
SNHG1-218ENST00000541615 FILIP1LQ4L180 1135 aa6.2□□□□□ -1.42
SNHG1-218ENST00000541615 WDR78Q5VTH9 848 aa6.2□□□□□ -1.42
SNHG1-218ENST00000541615 WWC2Q6AWC2 1192 aa6.2□□□□□ -1.42
SNHG1-218ENST00000541615 KLHL10Q6JEL2 608 aa6.2□□□□□ -1.42
SNHG1-218ENST00000541615 SIN3AQ96ST3 1273 aa6.2□□□□□ -1.42
SNHG1-218ENST00000541615 RANBP17Q9H2T7 1088 aaKnown RBP6.2□□□□□ -1.42
SNHG1-218ENST00000541615 MRS2Q9HD23 443 aa6.2□□□□□ -1.42
SNHG1-218ENST00000541615 SPTLC3Q9NUV7 552 aa6.2□□□□□ -1.42
SNHG1-218ENST00000541615 CHCHD3Q9NX63 227 aaKnown RBP6.2□□□□□ -1.42
SNHG1-218ENST00000541615 ETAA1Q9NY74 926 aa6.2□□□□□ -1.42
SNHG1-218ENST00000541615 UHRF1BP1LA0JNW5 1464 aa6.2□□□□□ -1.42
SNHG1-218ENST00000541615 FHAD1B1AJZ9 1412 aa6.19□□□□□ -1.42
SNHG1-218ENST00000541615 MYO1CO00159 1063 aa6.19□□□□□ -1.42
SNHG1-218ENST00000541615 SGSM2O43147 1006 aa6.19□□□□□ -1.42
SNHG1-218ENST00000541615 C21orf2O43822 256 aa6.19□□□□□ -1.42
SNHG1-218ENST00000541615 KDM4AO75164 1064 aa6.19□□□□□ -1.42
SNHG1-218ENST00000541615 CHGAP10645 457 aaKnown RBP6.19□□□□□ -1.42
SNHG1-218ENST00000541615 SCP2P22307 547 aa6.19□□□□□ -1.42
SNHG1-218ENST00000541615 RDXP35241 583 aaKnown RBP6.19□□□□□ -1.42
SNHG1-218ENST00000541615 FKBP5Q13451 457 aaPredicted RBP6.19□□□□□ -1.42
SNHG1-218ENST00000541615 BMS1Q14692 1282 aaKnown RBP6.19□□□□□ -1.42
SNHG1-218ENST00000541615 RBBP5Q15291 538 aaKnown RBP6.19□□□□□ -1.42
SNHG1-218ENST00000541615 KLHL40Q2TBA0 621 aa6.19□□□□□ -1.42
SNHG1-218ENST00000541615 HSP90AB2PQ58FF8 381 aa6.19□□□□□ -1.42
SNHG1-218ENST00000541615 DMRTA1Q5VZB9 504 aa6.19□□□□□ -1.42
SNHG1-218ENST00000541615 MMS22LQ6ZRQ5 1243 aa6.19□□□□□ -1.42
SNHG1-218ENST00000541615 CLEC17AQ6ZS10 378 aa6.19□□□□□ -1.42
SNHG1-218ENST00000541615 EFCAB13Q8IY85 973 aa6.19□□□□□ -1.42
SNHG1-218ENST00000541615 HELBQ8NG08 1087 aaPredicted RBP6.19□□□□□ -1.42
SNHG1-218ENST00000541615 BORCS6Q96GS4 357 aa6.19□□□□□ -1.42
SNHG1-218ENST00000541615 AK7Q96M32 723 aa6.19□□□□□ -1.42
SNHG1-218ENST00000541615 UTP14AQ9BVJ6 771 aaKnown RBP6.19□□□□□ -1.42
SNHG1-218ENST00000541615 KDM4CQ9H3R0 1056 aa6.19□□□□□ -1.42
SNHG1-218ENST00000541615 VEZTQ9HBM0 779 aa6.19□□□□□ -1.42
SNHG1-218ENST00000541615 A1CFQ9NQ94 594 aaKnown RBP6.19□□□□□ -1.42
SNHG1-218ENST00000541615 FAM53CQ9NYF3 392 aa6.19□□□□□ -1.42
SNHG1-218ENST00000541615 PLA2G2EQ9NZK7 142 aa6.19□□□□□ -1.42
SNHG1-218ENST00000541615 FRMD4BQ9Y2L6 1034 aa6.19□□□□□ -1.42
SNHG1-218ENST00000541615 SYNRGQ9UMZ2 1314 aa6.19□□□□□ -1.42
SNHG1-218ENST00000541615 AKNAQ7Z591 1439 aa6.18□□□□□ -1.42
SNHG1-218ENST00000541615 GOLGA6CA6NDK9 693 aa6.18□□□□□ -1.42
SNHG1-218ENST00000541615 GOLGA6BA6NDN3 693 aa6.18□□□□□ -1.42
SNHG1-218ENST00000541615 ATP8B1O43520 1251 aa6.18□□□□□ -1.42
SNHG1-218ENST00000541615 SMC2O95347 1197 aa6.18□□□□□ -1.42
SNHG1-218ENST00000541615 GOLGA6DP0CG33 693 aa6.18□□□□□ -1.42
SNHG1-218ENST00000541615 PAX7P23759 505 aa6.18□□□□□ -1.42
SNHG1-218ENST00000541615 U2AF2P26368 475 aaKnown RBP eCLIP6.18□□□□□ -1.422e-8■■■■□ 21.3
SNHG1-218ENST00000541615 PSEN2P49810 448 aa6.18□□□□□ -1.42
SNHG1-218ENST00000541615 NLRP13Q86W25 1043 aa6.18□□□□□ -1.42
SNHG1-218ENST00000541615 IQUBQ8NA54 791 aa6.18□□□□□ -1.42
SNHG1-218ENST00000541615 ZNF397Q8NF99 534 aaPredicted RBP6.18□□□□□ -1.42
SNHG1-218ENST00000541615 KIF18AQ8NI77 898 aa6.18□□□□□ -1.42
SNHG1-218ENST00000541615 GOLGA5Q8TBA6 731 aa6.18□□□□□ -1.42
SNHG1-218ENST00000541615 OXER1Q8TDS5 423 aa6.18□□□□□ -1.42
SNHG1-218ENST00000541615 PNISRQ8TF01 805 aaKnown RBP6.18□□□□□ -1.42
SNHG1-218ENST00000541615 TNPO1Q92973 898 aaKnown RBP6.18□□□□□ -1.42
SNHG1-218ENST00000541615 RMDN2Q96LZ7 410 aa6.18□□□□□ -1.42
SNHG1-218ENST00000541615 CRISPLD2Q9H0B8 497 aa6.18□□□□□ -1.42
SNHG1-218ENST00000541615 GOLGA6AQ9NYA3 693 aa6.18□□□□□ -1.42
SNHG1-218ENST00000541615 CPSF2Q9P2I0 782 aaKnown RBP6.18□□□□□ -1.42
SNHG1-218ENST00000541615 RCAN3Q9UKA8 241 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms