RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 MKL2Q9ULH7 1088 aa9.63□□□□□ -0.87
RAP1B-224ENST00000541216 GPR25O00155 361 aa9.62□□□□□ -0.87
RAP1B-224ENST00000541216 SKIV2LQ15477 1246 aaKnown RBP9.62□□□□□ -0.87
RAP1B-224ENST00000541216 TRERF1Q96PN7 1200 aa9.62□□□□□ -0.87
RAP1B-224ENST00000541216 LIMD1Q9UGP4 676 aa9.62□□□□□ -0.87
RAP1B-224ENST00000541216 OIP5O43482 229 aa9.61□□□□□ -0.87
RAP1B-224ENST00000541216 ARHGAP9Q9BRR9 750 aa9.61□□□□□ -0.87
RAP1B-224ENST00000541216 NUTM2BA6NNL0 878 aaPredicted RBP9.6□□□□□ -0.87
RAP1B-224ENST00000541216 NUTM2EB1AL46 878 aaPredicted RBP9.6□□□□□ -0.87
RAP1B-224ENST00000541216 H7C1W4 665 aa9.6□□□□□ -0.87
RAP1B-224ENST00000541216 ADH1AP07327 375 aa9.6□□□□□ -0.87
RAP1B-224ENST00000541216 INTS6LQ5JSJ4 861 aaKnown RBP9.6□□□□□ -0.87
RAP1B-224ENST00000541216 NUTM2DQ5VT03 806 aaPredicted RBP9.6□□□□□ -0.87
RAP1B-224ENST00000541216 NUTM2AQ8IVF1 878 aaPredicted RBP9.6□□□□□ -0.87
RAP1B-224ENST00000541216 PROCA1Q8NCQ7 364 aaPredicted RBP9.6□□□□□ -0.87
RAP1B-224ENST00000541216 HELBQ8NG08 1087 aaPredicted RBP9.6□□□□□ -0.87
RAP1B-224ENST00000541216 POLR3EQ9NVU0 708 aa9.6□□□□□ -0.87
RAP1B-224ENST00000541216 MX2P20592 715 aa9.59□□□□□ -0.87
RAP1B-224ENST00000541216 PTGIRP43119 386 aa9.59□□□□□ -0.87
RAP1B-224ENST00000541216 CSPP1Q1MSJ5 1256 aa9.59□□□□□ -0.87
RAP1B-224ENST00000541216 TUSC1Q2TAM9 212 aa9.59□□□□□ -0.87
RAP1B-224ENST00000541216 PDXDC2PQ6P474 469 aa9.59□□□□□ -0.87
RAP1B-224ENST00000541216 CLK2P49760 499 aaKnown RBP9.58□□□□□ -0.88
RAP1B-224ENST00000541216 DBN1Q16643 649 aa9.58□□□□□ -0.88
RAP1B-224ENST00000541216 LCE3BQ5TA77 95 aa9.58□□□□□ -0.88
RAP1B-224ENST00000541216 FBXO31Q5XUX0 539 aaPredicted RBP9.58□□□□□ -0.88
RAP1B-224ENST00000541216 RIPOR1Q6ZS17 1223 aa9.58□□□□□ -0.88
RAP1B-224ENST00000541216 ZBTB33Q86T24 672 aa9.58□□□□□ -0.88
RAP1B-224ENST00000541216 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.58□□□□□ -0.88
RAP1B-224ENST00000541216 SNRPNP63162 240 aaKnown RBP9.57□□□□□ -0.88
RAP1B-224ENST00000541216 PRICKLE2Q7Z3G6 844 aa9.57□□□□□ -0.88
RAP1B-224ENST00000541216 GTPBP3Q969Y2 492 aaKnown RBP9.56□□□□□ -0.88
RAP1B-224ENST00000541216 RHOQP17081 205 aa9.55□□□□□ -0.88
RAP1B-224ENST00000541216 MAP2K3P46734 347 aa9.55□□□□□ -0.88
RAP1B-224ENST00000541216 RNF144AP50876 292 aaPredicted RBP9.55□□□□□ -0.88
RAP1B-224ENST00000541216 QPCTQ16769 361 aa9.55□□□□□ -0.88
RAP1B-224ENST00000541216 OXCT2Q9BYC2 517 aaPredicted RBP9.55□□□□□ -0.88
RAP1B-224ENST00000541216 COL8A1P27658 744 aa9.54□□□□□ -0.88
RAP1B-224ENST00000541216 TRIM52Q96A61 297 aa9.54□□□□□ -0.88
RAP1B-224ENST00000541216 PCMTD1Q96MG8 357 aaPredicted RBP9.54□□□□□ -0.88
RAP1B-224ENST00000541216 PIK3R2O00459 728 aa9.53□□□□□ -0.88
RAP1B-224ENST00000541216 LILRB3O75022 631 aa9.53□□□□□ -0.88
RAP1B-224ENST00000541216 ZNF784Q8NCA9 323 aaPredicted RBP9.53□□□□□ -0.88
RAP1B-224ENST00000541216 RRAGCQ9HB90 399 aa9.53□□□□□ -0.88
RAP1B-224ENST00000541216 TMPRSS4Q9NRS4 437 aa9.53□□□□□ -0.88
RAP1B-224ENST00000541216 DYRK1BQ9Y463 629 aa9.53□□□□□ -0.88
RAP1B-224ENST00000541216 NBPF20Q3BBV1 942 aa9.52□□□□□ -0.89
RAP1B-224ENST00000541216 GRIN2CQ14957 1233 aa9.51□□□□□ -0.89
RAP1B-224ENST00000541216 ZMYM1Q5SVZ6 1142 aa9.51□□□□□ -0.89
RAP1B-224ENST00000541216 PPP2R2DQ66LE6 453 aa9.51□□□□□ -0.89
RAP1B-224ENST00000541216 BTBD11A6QL63 1104 aa9.5□□□□□ -0.89
RAP1B-224ENST00000541216 RTL5Q5HYW3 569 aaPredicted RBP9.5□□□□□ -0.89
RAP1B-224ENST00000541216 KDF1Q8NAX2 398 aaPredicted RBP9.5□□□□□ -0.89
RAP1B-224ENST00000541216 KRTAP4-12Q9BQ66 201 aa9.5□□□□□ -0.89
RAP1B-224ENST00000541216 C1QTNF9BB2RNN3 333 aa9.49□□□□□ -0.89
RAP1B-224ENST00000541216 LILRA1O75019 489 aa9.49□□□□□ -0.89
RAP1B-224ENST00000541216 GPC1P35052 558 aa9.49□□□□□ -0.89
RAP1B-224ENST00000541216 ADD1P35611 737 aaKnown RBP9.49□□□□□ -0.89
RAP1B-224ENST00000541216 GAS2L1Q99501 681 aaPredicted RBP9.49□□□□□ -0.89
RAP1B-224ENST00000541216 FKBPLQ9UIM3 349 aa9.49□□□□□ -0.89
RAP1B-224ENST00000541216 ZC3H4Q9UPT8 1303 aaKnown RBP9.49□□□□□ -0.89
RAP1B-224ENST00000541216 PTK2Q05397 1052 aa9.48□□□□□ -0.89
RAP1B-224ENST00000541216 SEMA6BQ9H3T3 888 aa9.48□□□□□ -0.89
RAP1B-224ENST00000541216 GDF2Q9UK05 429 aaPredicted RBP9.48□□□□□ -0.89
RAP1B-224ENST00000541216 SHISA8B8ZZ34 492 aa9.47□□□□□ -0.89
RAP1B-224ENST00000541216 EDARADDQ8WWZ3 215 aa9.46□□□□□ -0.9
RAP1B-224ENST00000541216 CFHR5Q9BXR6 569 aa9.46□□□□□ -0.9
RAP1B-224ENST00000541216 ERVH48-1M5A8F1 160 aa9.45□□□□□ -0.9
RAP1B-224ENST00000541216 RFC5P40937 340 aa9.45□□□□□ -0.9
RAP1B-224ENST00000541216 RAB15P59190 212 aa9.45□□□□□ -0.9
RAP1B-224ENST00000541216 CD163Q86VB7 1156 aa9.45□□□□□ -0.9
RAP1B-224ENST00000541216 NUCKS1Q9H1E3 243 aaKnown RBP9.45□□□□□ -0.9
RAP1B-224ENST00000541216 GPSM3Q9Y4H4 160 aa9.45□□□□□ -0.9
RAP1B-224ENST00000541216 ITGB7P26010 798 aa9.44□□□□□ -0.9
RAP1B-224ENST00000541216 KLRG1Q96E93 195 aa9.43□□□□□ -0.9
RAP1B-224ENST00000541216 PHF24Q9UPV7 400 aa9.43□□□□□ -0.9
RAP1B-224ENST00000541216 SCO2A0A1W2PP80 73 aa9.42□□□□□ -0.9
RAP1B-224ENST00000541216 GNB5O14775 395 aa9.42□□□□□ -0.9
RAP1B-224ENST00000541216 AMPD1P23109 780 aa9.42□□□□□ -0.9
RAP1B-224ENST00000541216 LINC00114Q6XXX2 140 aa9.42□□□□□ -0.9
RAP1B-224ENST00000541216 GOLGA6L1Q8N7Z2 621 aa9.42□□□□□ -0.9
RAP1B-224ENST00000541216 ADAM32Q8TC27 787 aa9.42□□□□□ -0.9
RAP1B-224ENST00000541216 SUV39H2Q9H5I1 410 aa9.42□□□□□ -0.9
RAP1B-224ENST00000541216 NOP53Q9NZM5 478 aaKnown RBP9.42□□□□□ -0.9
RAP1B-224ENST00000541216 ATP5J2-PTCD1G3V325 749 aa9.41□□□□□ -0.9
RAP1B-224ENST00000541216 POU4F2Q12837 409 aa9.41□□□□□ -0.9
RAP1B-224ENST00000541216 WDR44Q5JSH3 913 aa9.41□□□□□ -0.9
RAP1B-224ENST00000541216 ATP1B4Q9UN42 357 aaPredicted RBP9.41□□□□□ -0.9
RAP1B-224ENST00000541216 MEN1O00255 615 aa9.4□□□□□ -0.9
RAP1B-224ENST00000541216 DOC2BQ14184 412 aa9.4□□□□□ -0.9
RAP1B-224ENST00000541216 SLC27A3Q5K4L6 730 aa9.4□□□□□ -0.9
RAP1B-224ENST00000541216 C1orf229Q6ZS94 237 aaPredicted RBP9.4□□□□□ -0.9
RAP1B-224ENST00000541216 F11P03951 625 aa9.39□□□□□ -0.91
RAP1B-224ENST00000541216 CTDSPL2Q05D32 466 aa9.39□□□□□ -0.91
RAP1B-224ENST00000541216 DZIP3Q86Y13 1208 aaKnown RBP9.39□□□□□ -0.91
RAP1B-224ENST00000541216 CHRNA4P43681 627 aa9.38□□□□□ -0.91
RAP1B-224ENST00000541216 TMEM259Q4ZIN3 620 aa9.38□□□□□ -0.91
RAP1B-224ENST00000541216 NBPF10Q6P3W6 841 aaKnown RBP9.38□□□□□ -0.91
RAP1B-224ENST00000541216 SEPT12Q8IYM1 358 aa9.38□□□□□ -0.91
RAP1B-224ENST00000541216 NBPF15Q8N660 670 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms