RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 MYCBPQ99417 103 aaPredicted RBP6.63□□□□□ -1.35
CSMD1-215ENST00000537824 RIPK4P57078 832 aa6.63□□□□□ -1.35
CSMD1-215ENST00000537824 NOLC1Q14978 699 aaKnown RBP eCLIP6.63□□□□□ -1.35
CSMD1-215ENST00000537824 SETSIPP0DME0 302 aa6.62□□□□□ -1.35
CSMD1-215ENST00000537824 HYPKQ9NX55 129 aa6.62□□□□□ -1.35
CSMD1-215ENST00000537824 PIP4K2AP48426 406 aaPredicted RBP6.62□□□□□ -1.35
CSMD1-215ENST00000537824 STK3Q13188 491 aa6.62□□□□□ -1.35
CSMD1-215ENST00000537824 OTUD6BQ8N6M0 293 aa6.62□□□□□ -1.35
CSMD1-215ENST00000537824 HEATR1Q9H583 2144 aaKnown RBP6.62□□□□□ -1.35
CSMD1-215ENST00000537824 OGFRQ9NZT2 677 aa6.62□□□□□ -1.35
CSMD1-215ENST00000537824 MAATS1Q7Z4T9 603 aa6.62□□□□□ -1.35
CSMD1-215ENST00000537824 ZNF397Q8NF99 534 aaPredicted RBP6.62□□□□□ -1.35
CSMD1-215ENST00000537824 BAG4O95429 457 aaKnown RBP6.62□□□□□ -1.35
CSMD1-215ENST00000537824 RBM28Q9NW13 759 aaKnown RBP6.62□□□□□ -1.35
CSMD1-215ENST00000537824 ZSCAN23Q3MJ62 389 aa6.62□□□□□ -1.35
CSMD1-215ENST00000537824 SMTNL1A8MU46 457 aa6.62□□□□□ -1.35
CSMD1-215ENST00000537824 CCDC43Q96MW1 224 aaKnown RBP6.62□□□□□ -1.35
CSMD1-215ENST00000537824 CERS3Q8IU89 383 aa6.62□□□□□ -1.35
CSMD1-215ENST00000537824 CYP46A1Q9Y6A2 500 aa6.62□□□□□ -1.35
CSMD1-215ENST00000537824 CAPN2P17655 700 aa6.61□□□□□ -1.35
CSMD1-215ENST00000537824 TOP1P11387 765 aaKnown RBP6.61□□□□□ -1.35
CSMD1-215ENST00000537824 PDE3AQ14432 1141 aa6.61□□□□□ -1.35
CSMD1-215ENST00000537824 CCDC121Q6ZUS5 278 aa6.61□□□□□ -1.35
CSMD1-215ENST00000537824 FSD1Q9BTV5 496 aa6.61□□□□□ -1.35
CSMD1-215ENST00000537824 STX1AQ16623 288 aa6.61□□□□□ -1.35
CSMD1-215ENST00000537824 GOLIM4O00461 696 aa6.61□□□□□ -1.35
CSMD1-215ENST00000537824 VPS18Q9P253 973 aa6.61□□□□□ -1.35
CSMD1-215ENST00000537824 ANKRD18AQ8IVF6 992 aa6.61□□□□□ -1.35
CSMD1-215ENST00000537824 BRMS1Q9HCU9 246 aa6.61□□□□□ -1.35
CSMD1-215ENST00000537824 ARID1AO14497 2285 aa6.61□□□□□ -1.35
CSMD1-215ENST00000537824 EBAG9O00559 213 aa6.61□□□□□ -1.35
CSMD1-215ENST00000537824 SMC1AQ14683 1233 aaKnown RBP6.61□□□□□ -1.35
CSMD1-215ENST00000537824 CCDC160A6NGH7 325 aa6.61□□□□□ -1.35
CSMD1-215ENST00000537824 GIGYF2Q6Y7W6 1299 aaKnown RBP6.61□□□□□ -1.35
CSMD1-215ENST00000537824 CUX2O14529 1486 aa6.61□□□□□ -1.35
CSMD1-215ENST00000537824 SEPT6Q14141 434 aa6.61□□□□□ -1.35
CSMD1-215ENST00000537824 GOPCQ9HD26 462 aa6.61□□□□□ -1.35
CSMD1-215ENST00000537824 UACAQ9BZF9 1416 aa6.61□□□□□ -1.35
CSMD1-215ENST00000537824 IMMTQ16891 758 aaKnown RBP6.61□□□□□ -1.35
CSMD1-215ENST00000537824 CEP112Q8N8E3 955 aa6.61□□□□□ -1.35
CSMD1-215ENST00000537824 NEBLO76041 1014 aa6.6□□□□□ -1.35
CSMD1-215ENST00000537824 CKAP2LQ8IYA6 745 aa6.6□□□□□ -1.35
CSMD1-215ENST00000537824 DACH1Q9UI36 760 aa6.6□□□□□ -1.35
CSMD1-215ENST00000537824 CARMIL1Q5VZK9 1371 aa6.6□□□□□ -1.35
CSMD1-215ENST00000537824 DHX16O60231 1041 aaKnown RBP6.6□□□□□ -1.35
CSMD1-215ENST00000537824 UBE4AQ14139 1066 aa6.6□□□□□ -1.35
CSMD1-215ENST00000537824 KRBA2Q6ZNG9 492 aa6.6□□□□□ -1.35
CSMD1-215ENST00000537824 TMC6Q7Z403 805 aa6.6□□□□□ -1.35
CSMD1-215ENST00000537824 ADAMTS8Q9UP79 889 aa6.6□□□□□ -1.35
CSMD1-215ENST00000537824 DAAM2Q86T65 1068 aa6.6□□□□□ -1.35
CSMD1-215ENST00000537824 NOB1Q9ULX3 412 aaKnown RBP6.6□□□□□ -1.35
CSMD1-215ENST00000537824 FEZ1Q99689 392 aa6.6□□□□□ -1.35
CSMD1-215ENST00000537824 DNA2P51530 1060 aa6.6□□□□□ -1.35
CSMD1-215ENST00000537824 RSRC1Q96IZ7 334 aaKnown RBP6.6□□□□□ -1.35
CSMD1-215ENST00000537824 RNF216Q9NWF9 866 aaPredicted RBP6.6□□□□□ -1.35
CSMD1-215ENST00000537824 CCDC114Q96M63 670 aa6.6□□□□□ -1.35
CSMD1-215ENST00000537824 BCAR3O75815 825 aa6.6□□□□□ -1.35
CSMD1-215ENST00000537824 SPECC1LQ69YQ0 1117 aa6.6□□□□□ -1.35
CSMD1-215ENST00000537824 ATRIPQ8WXE1 791 aa6.6□□□□□ -1.35
CSMD1-215ENST00000537824 EIF2S2P20042 333 aaKnown RBP6.6□□□□□ -1.35
CSMD1-215ENST00000537824 GSDMDP57764 484 aa6.6□□□□□ -1.35
CSMD1-215ENST00000537824 ERC1Q8IUD2 1116 aa6.6□□□□□ -1.35
CSMD1-215ENST00000537824 SEC16AO15027 2179 aa6.59□□□□□ -1.35
CSMD1-215ENST00000537824 CCDC178Q5BJE1 867 aa6.59□□□□□ -1.35
CSMD1-215ENST00000537824 CCDC83Q8IWF9 413 aa6.59□□□□□ -1.35
CSMD1-215ENST00000537824 PAIP2Q9BPZ3 127 aaKnown RBP6.59□□□□□ -1.35
CSMD1-215ENST00000537824 ZKSCAN5Q9Y2L8 839 aa6.59□□□□□ -1.35
CSMD1-215ENST00000537824 CCDC6Q16204 474 aa6.59□□□□□ -1.35
CSMD1-215ENST00000537824 TTC12Q9H892 705 aaPredicted RBP6.59□□□□□ -1.35
CSMD1-215ENST00000537824 EIF5P55010 431 aaKnown RBP6.59□□□□□ -1.35
CSMD1-215ENST00000537824 CSB-PGBD3P0DP91 1061 aa6.59□□□□□ -1.35
CSMD1-215ENST00000537824 GABPB1Q06547 395 aaPredicted RBP6.59□□□□□ -1.35
CSMD1-215ENST00000537824 HLTFQ14527 1009 aaKnown RBP eCLIP6.59□□□□□ -1.35
CSMD1-215ENST00000537824 CHD1LQ86WJ1 897 aa6.59□□□□□ -1.35
CSMD1-215ENST00000537824 SUDS3Q9H7L9 328 aaPredicted RBP6.59□□□□□ -1.35
CSMD1-215ENST00000537824 ANKRD1Q15327 319 aa6.59□□□□□ -1.35
CSMD1-215ENST00000537824 FERMT3Q86UX7 667 aa6.59□□□□□ -1.35
CSMD1-215ENST00000537824 MIPOL1Q8TD10 442 aa6.59□□□□□ -1.35
CSMD1-215ENST00000537824 HCLS1P14317 486 aaPredicted RBP6.59□□□□□ -1.35
CSMD1-215ENST00000537824 DNAJC21Q5F1R6 531 aaKnown RBP6.59□□□□□ -1.35
CSMD1-215ENST00000537824 A0A1B0GUA9 196 aa6.59□□□□□ -1.35
CSMD1-215ENST00000537824 PDRG1Q9NUG6 133 aa6.59□□□□□ -1.35
CSMD1-215ENST00000537824 SEPT11Q9NVA2 429 aaKnown RBP6.59□□□□□ -1.35
CSMD1-215ENST00000537824 FKBP5Q13451 457 aaPredicted RBP6.59□□□□□ -1.36
CSMD1-215ENST00000537824 ANO10Q9NW15 660 aa6.59□□□□□ -1.36
CSMD1-215ENST00000537824 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.59□□□□□ -1.36
CSMD1-215ENST00000537824 RAPGEF2Q9Y4G8 1499 aa6.59□□□□□ -1.36
CSMD1-215ENST00000537824 GNG11P61952 73 aa6.58□□□□□ -1.36
CSMD1-215ENST00000537824 CDK5RAP3Q96JB5 506 aa6.58□□□□□ -1.36
CSMD1-215ENST00000537824 MAP2K2P36507 400 aa6.58□□□□□ -1.36
CSMD1-215ENST00000537824 GDPD2Q9HCC8 539 aa6.58□□□□□ -1.36
CSMD1-215ENST00000537824 JAKMIP1Q96N16 626 aaKnown RBP6.58□□□□□ -1.36
CSMD1-215ENST00000537824 CCDC144AA2RUR9 1427 aa6.58□□□□□ -1.36
CSMD1-215ENST00000537824 ERICH2A1L162 156 aa6.58□□□□□ -1.36
CSMD1-215ENST00000537824 UBTFL1P0CB47 393 aaPredicted RBP6.58□□□□□ -1.36
CSMD1-215ENST00000537824 AMPHP49418 695 aa6.58□□□□□ -1.36
CSMD1-215ENST00000537824 CEP83Q9Y592 693 aa6.58□□□□□ -1.36
CSMD1-215ENST00000537824 MAP4K4O95819 1239 aaPredicted RBP6.58□□□□□ -1.36
CSMD1-215ENST00000537824 HS1BP3Q53T59 392 aa6.58□□□□□ -1.36
CSMD1-215ENST00000537824 GOLGA1Q92805 767 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms