RNA–Protein interactions for RNA: ENST00000535835.5

SPARCL1-208, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-208ENST00000535835 PTGIRP43119 386 aa6.94□□□□□ -1.3
SPARCL1-208ENST00000535835 MAP3K10Q02779 954 aa6.94□□□□□ -1.3
SPARCL1-208ENST00000535835 DZIP3Q86Y13 1208 aaKnown RBP6.94□□□□□ -1.3
SPARCL1-208ENST00000535835 VWA5B2Q8N398 1253 aa6.94□□□□□ -1.3
SPARCL1-208ENST00000535835 ATP1B4Q9UN42 357 aaPredicted RBP6.94□□□□□ -1.3
SPARCL1-208ENST00000535835 SV2AQ7L0J3 742 aa6.93□□□□□ -1.3
SPARCL1-208ENST00000535835 GALNT6Q8NCL4 622 aa6.93□□□□□ -1.3
SPARCL1-208ENST00000535835 POLMQ9NP87 494 aaPredicted RBP6.93□□□□□ -1.3
SPARCL1-208ENST00000535835 ENAMQ9NRM1 1142 aa6.93□□□□□ -1.3
SPARCL1-208ENST00000535835 CUEDC1Q9NWM3 386 aaPredicted RBP6.93□□□□□ -1.3
SPARCL1-208ENST00000535835 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.92□□□□□ -1.3
SPARCL1-208ENST00000535835 FBXO45P0C2W1 286 aa6.92□□□□□ -1.3
SPARCL1-208ENST00000535835 TMEM259Q4ZIN3 620 aa6.92□□□□□ -1.3
SPARCL1-208ENST00000535835 CDC14CA4D256 554 aa6.91□□□□□ -1.3
SPARCL1-208ENST00000535835 PHF20L1A8MW92 1017 aa6.91□□□□□ -1.3
SPARCL1-208ENST00000535835 GIGYF1O75420 1035 aaPredicted RBP6.91□□□□□ -1.3
SPARCL1-208ENST00000535835 SEPT12Q8IYM1 358 aa6.91□□□□□ -1.3
SPARCL1-208ENST00000535835 PNMA1Q8ND90 353 aa6.91□□□□□ -1.3
SPARCL1-208ENST00000535835 DCAF5Q96JK2 942 aa6.91□□□□□ -1.3
SPARCL1-208ENST00000535835 KRTAP9-2Q9BYQ4 174 aa6.91□□□□□ -1.3
SPARCL1-208ENST00000535835 CYLDQ9NQC7 956 aa6.91□□□□□ -1.3
SPARCL1-208ENST00000535835 ZBBXA8MT70 800 aa6.9□□□□□ -1.3
SPARCL1-208ENST00000535835 K7ELQ4 463 aaPredicted RBP6.9□□□□□ -1.3
SPARCL1-208ENST00000535835 LYPD4Q6UWN0 246 aa6.9□□□□□ -1.3
SPARCL1-208ENST00000535835 Q8N3U1 123 aa6.9□□□□□ -1.3
SPARCL1-208ENST00000535835 PCMTD1Q96MG8 357 aaPredicted RBP6.9□□□□□ -1.3
SPARCL1-208ENST00000535835 ADAMTS2O95450 1211 aa6.89□□□□□ -1.31
SPARCL1-208ENST00000535835 RNF144AP50876 292 aaPredicted RBP6.89□□□□□ -1.31
SPARCL1-208ENST00000535835 GAS6Q14393 721 aa6.89□□□□□ -1.31
SPARCL1-208ENST00000535835 IL27Q8NEV9 243 aa6.89□□□□□ -1.31
SPARCL1-208ENST00000535835 LYSMD3Q7Z3D4 306 aa6.88□□□□□ -1.31
SPARCL1-208ENST00000535835 BEND7Q8N7W2 519 aaPredicted RBP6.88□□□□□ -1.31
SPARCL1-208ENST00000535835 PCDHB9Q9Y5E1 797 aa6.88□□□□□ -1.31
SPARCL1-208ENST00000535835 KRTAP9-6A0A140TA67 174 aa6.87□□□□□ -1.31
SPARCL1-208ENST00000535835 ERVK-9P63128 1117 aa6.87□□□□□ -1.31
SPARCL1-208ENST00000535835 CNTNAP5Q8WYK1 1306 aa6.86□□□□□ -1.31
SPARCL1-208ENST00000535835 PROCP04070 461 aa6.86□□□□□ -1.31
SPARCL1-208ENST00000535835 CELA2BP08218 269 aaPredicted RBP6.86□□□□□ -1.31
SPARCL1-208ENST00000535835 RHOQP17081 205 aa6.86□□□□□ -1.31
SPARCL1-208ENST00000535835 SCTRP47872 440 aa6.86□□□□□ -1.31
SPARCL1-208ENST00000535835 BRPF1P55201 1214 aaPredicted RBP6.86□□□□□ -1.31
SPARCL1-208ENST00000535835 SRSF11Q05519 484 aaKnown RBP6.86□□□□□ -1.31
SPARCL1-208ENST00000535835 NEUROD2Q15784 382 aa6.86□□□□□ -1.31
SPARCL1-208ENST00000535835 PRICKLE2Q7Z3G6 844 aa6.86□□□□□ -1.31
SPARCL1-208ENST00000535835 PODNQ7Z5L7 613 aa6.86□□□□□ -1.31
SPARCL1-208ENST00000535835 MTMR14Q8NCE2 650 aa6.86□□□□□ -1.31
SPARCL1-208ENST00000535835 A0A1W2PRU2 124 aa6.85□□□□□ -1.31
SPARCL1-208ENST00000535835 ATP5J2-PTCD1G3V325 749 aa6.85□□□□□ -1.31
SPARCL1-208ENST00000535835 TRAK2O60296 914 aa6.84□□□□□ -1.31
SPARCL1-208ENST00000535835 SLC24A1O60721 1099 aa6.84□□□□□ -1.31
SPARCL1-208ENST00000535835 ITGB2P05107 769 aa6.84□□□□□ -1.31
SPARCL1-208ENST00000535835 GPC1P35052 558 aa6.84□□□□□ -1.31
SPARCL1-208ENST00000535835 NR1H3Q13133 447 aa6.84□□□□□ -1.31
SPARCL1-208ENST00000535835 ZNF837Q96EG3 531 aaPredicted RBP6.84□□□□□ -1.31
SPARCL1-208ENST00000535835 SOCS7O14512 581 aa6.83□□□□□ -1.32
SPARCL1-208ENST00000535835 DBN1Q16643 649 aa6.83□□□□□ -1.32
SPARCL1-208ENST00000535835 CC2D2BQ6DHV5 1058 aa6.83□□□□□ -1.32
SPARCL1-208ENST00000535835 BANK1Q8NDB2 785 aa6.83□□□□□ -1.32
SPARCL1-208ENST00000535835 GRIP2Q9C0E4 1043 aa6.83□□□□□ -1.32
SPARCL1-208ENST00000535835 OSBPL3Q9H4L5 887 aa6.83□□□□□ -1.32
SPARCL1-208ENST00000535835 MEN1O00255 615 aa6.82□□□□□ -1.32
SPARCL1-208ENST00000535835 KRTAP1-3Q8IUG1 177 aa6.82□□□□□ -1.32
SPARCL1-208ENST00000535835 TRIM22Q8IYM9 498 aa6.82□□□□□ -1.32
SPARCL1-208ENST00000535835 NEDD1Q8NHV4 660 aa6.82□□□□□ -1.32
SPARCL1-208ENST00000535835 SNRKQ9NRH2 765 aa6.82□□□□□ -1.32
SPARCL1-208ENST00000535835 POU4F2Q12837 409 aa6.81□□□□□ -1.32
SPARCL1-208ENST00000535835 CLN3Q13286 438 aa6.81□□□□□ -1.32
SPARCL1-208ENST00000535835 CCDC125Q86Z20 511 aa6.81□□□□□ -1.32
SPARCL1-208ENST00000535835 SPATA31C2B4DYI2 1134 aa6.8□□□□□ -1.32
SPARCL1-208ENST00000535835 GPR25O00155 361 aa6.8□□□□□ -1.32
SPARCL1-208ENST00000535835 THBS1P07996 1170 aa6.8□□□□□ -1.32
SPARCL1-208ENST00000535835 BAG6P46379 1132 aa6.8□□□□□ -1.32
SPARCL1-208ENST00000535835 DYRK1BQ9Y463 629 aa6.8□□□□□ -1.32
SPARCL1-208ENST00000535835 MCCD1P59942 119 aaPredicted RBP6.79□□□□□ -1.32
SPARCL1-208ENST00000535835 RNF20Q5VTR2 975 aa6.79□□□□□ -1.32
SPARCL1-208ENST00000535835 NBPF10Q6P3W6 841 aaKnown RBP6.79□□□□□ -1.32
SPARCL1-208ENST00000535835 NBPF15Q8N660 670 aa6.79□□□□□ -1.32
SPARCL1-208ENST00000535835 GMCL1Q96IK5 515 aa6.79□□□□□ -1.32
SPARCL1-208ENST00000535835 PCDHB11Q9Y5F2 797 aa6.79□□□□□ -1.32
SPARCL1-208ENST00000535835 HRH3Q9Y5N1 445 aa6.79□□□□□ -1.32
SPARCL1-208ENST00000535835 IL2RAP01589 272 aa6.78□□□□□ -1.32
SPARCL1-208ENST00000535835 CYP2U1Q7Z449 544 aa6.78□□□□□ -1.32
SPARCL1-208ENST00000535835 CCDC85AQ96PX6 553 aaPredicted RBP6.78□□□□□ -1.32
SPARCL1-208ENST00000535835 CDCA7Q9BWT1 371 aaPredicted RBP6.78□□□□□ -1.32
SPARCL1-208ENST00000535835 ARHGEF10LQ9HCE6 1279 aa6.78□□□□□ -1.32
SPARCL1-208ENST00000535835 MBIPQ9NS73 344 aa6.78□□□□□ -1.32
SPARCL1-208ENST00000535835 NDUFB9Q9Y6M9 179 aa6.78□□□□□ -1.32
SPARCL1-208ENST00000535835 FURINP09958 794 aa6.77□□□□□ -1.33
SPARCL1-208ENST00000535835 GTPBP3Q969Y2 492 aaKnown RBP6.77□□□□□ -1.33
SPARCL1-208ENST00000535835 IGF1RP08069 1367 aa6.77□□□□□ -1.33
SPARCL1-208ENST00000535835 BCRP11274 1271 aa6.76□□□□□ -1.33
SPARCL1-208ENST00000535835 TSGA10IPQ3SY00 556 aa6.76□□□□□ -1.33
SPARCL1-208ENST00000535835 WDR44Q5JSH3 913 aa6.76□□□□□ -1.33
SPARCL1-208ENST00000535835 RIPOR1Q6ZS17 1223 aa6.76□□□□□ -1.33
SPARCL1-208ENST00000535835 TRIM52Q96A61 297 aa6.76□□□□□ -1.33
SPARCL1-208ENST00000535835 ACDQ96AP0 544 aa6.76□□□□□ -1.33
SPARCL1-208ENST00000535835 NLRP3Q96P20 1036 aa6.76□□□□□ -1.33
SPARCL1-208ENST00000535835 RAB6BQ9NRW1 208 aa6.76□□□□□ -1.33
SPARCL1-208ENST00000535835 CEP126Q9P2H0 1117 aa6.76□□□□□ -1.33
SPARCL1-208ENST00000535835 SLC27A3Q5K4L6 730 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms