RNA–Protein interactions for RNA: ENST00000534669.1

GEN1-207, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 2

Gene GEN1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-207ENST00000534669 CPSF1Q10570 1443 aaKnown RBP10.35□□□□□ -0.75
GEN1-207ENST00000534669 TTLL13PA6NNM8 815 aa10.35□□□□□ -0.75
GEN1-207ENST00000534669 NLRP6P59044 892 aa10.35□□□□□ -0.75
GEN1-207ENST00000534669 SPON1Q9HCB6 807 aa10.35□□□□□ -0.75
GEN1-207ENST00000534669 METRNQ9UJH8 293 aa10.35□□□□□ -0.75
GEN1-207ENST00000534669 TRPM1Q7Z4N2 1603 aa10.35□□□□□ -0.75
GEN1-207ENST00000534669 NFAT5O94916 1531 aa10.34□□□□□ -0.75
GEN1-207ENST00000534669 PLSCR1O15162 318 aa10.33□□□□□ -0.76
GEN1-207ENST00000534669 DDB1Q16531 1140 aa10.33□□□□□ -0.76
GEN1-207ENST00000534669 TOM1L2Q6ZVM7 507 aa10.33□□□□□ -0.76
GEN1-207ENST00000534669 PPP1R1BQ9UD71 204 aaPredicted RBP10.33□□□□□ -0.76
GEN1-207ENST00000534669 NINLQ9Y2I6 1382 aa10.33□□□□□ -0.76
GEN1-207ENST00000534669 MON2Q7Z3U7 1717 aa10.33□□□□□ -0.76
GEN1-207ENST00000534669 WDR17Q8IZU2 1322 aa10.33□□□□□ -0.76
GEN1-207ENST00000534669 BRD4O60885 1362 aaPredicted RBP10.32□□□□□ -0.76
GEN1-207ENST00000534669 SOX12O15370 315 aa10.32□□□□□ -0.76
GEN1-207ENST00000534669 ZBTB7AO95365 584 aa10.32□□□□□ -0.76
GEN1-207ENST00000534669 PTGER2P43116 358 aa10.32□□□□□ -0.76
GEN1-207ENST00000534669 ZNF467Q7Z7K2 595 aaPredicted RBP10.32□□□□□ -0.76
GEN1-207ENST00000534669 BCL11BQ9C0K0 894 aaPredicted RBP10.32□□□□□ -0.76
GEN1-207ENST00000534669 CIZ1Q9ULV3 898 aaPredicted RBP10.32□□□□□ -0.76
GEN1-207ENST00000534669 PAPPAQ13219 1627 aa10.32□□□□□ -0.76
GEN1-207ENST00000534669 NHSQ6T4R5 1651 aa10.31□□□□□ -0.76
GEN1-207ENST00000534669 ARHGEF25Q86VW2 580 aa10.31□□□□□ -0.76
GEN1-207ENST00000534669 LTN1O94822 1766 aa10.31□□□□□ -0.76
GEN1-207ENST00000534669 BCL9O00512 1426 aa10.31□□□□□ -0.76
GEN1-207ENST00000534669 TTC21BQ7Z4L5 1316 aa10.31□□□□□ -0.76
GEN1-207ENST00000534669 TMEM106CQ9BVX2 250 aa10.3□□□□□ -0.76
GEN1-207ENST00000534669 USP54Q70EL1 1684 aa10.3□□□□□ -0.76
GEN1-207ENST00000534669 BTAF1O14981 1849 aa10.3□□□□□ -0.76
GEN1-207ENST00000534669 TXNRD1Q16881 649 aa10.29□□□□□ -0.76
GEN1-207ENST00000534669 IER5LQ5T953 404 aa10.29□□□□□ -0.76
GEN1-207ENST00000534669 L3MBTL2Q969R5 705 aa10.29□□□□□ -0.76
GEN1-207ENST00000534669 CARD10Q9BWT7 1032 aa10.29□□□□□ -0.76
GEN1-207ENST00000534669 PCDHB8Q9UN66 801 aa10.29□□□□□ -0.76
GEN1-207ENST00000534669 TNS2Q63HR2 1409 aa10.29□□□□□ -0.76
GEN1-207ENST00000534669 UTRNP46939 3433 aa10.28□□□□□ -0.76
GEN1-207ENST00000534669 SIN3AQ96ST3 1273 aa10.28□□□□□ -0.76
GEN1-207ENST00000534669 TRIM35Q9UPQ4 493 aa10.28□□□□□ -0.76
GEN1-207ENST00000534669 CD163L1Q9NR16 1453 aa10.28□□□□□ -0.76
GEN1-207ENST00000534669 TUBGCP6Q96RT7 1819 aa10.28□□□□□ -0.76
GEN1-207ENST00000534669 ABCC6O95255 1503 aa10.28□□□□□ -0.76
GEN1-207ENST00000534669 C11orf95C9JLR9 678 aaPredicted RBP10.27□□□□□ -0.77
GEN1-207ENST00000534669 KAT6BQ8WYB5 2073 aa10.27□□□□□ -0.77
GEN1-207ENST00000534669 EVC2Q86UK5 1308 aa10.27□□□□□ -0.77
GEN1-207ENST00000534669 CHD4Q14839 1912 aa10.27□□□□□ -0.77
GEN1-207ENST00000534669 POTEB2H3BUK9 544 aa10.26□□□□□ -0.77
GEN1-207ENST00000534669 CSB-PGBD3P0DP91 1061 aa10.26□□□□□ -0.77
GEN1-207ENST00000534669 SLC15A2Q16348 729 aa10.26□□□□□ -0.77
GEN1-207ENST00000534669 ACSBG1Q96GR2 724 aa10.26□□□□□ -0.77
GEN1-207ENST00000534669 FHDC1Q9C0D6 1143 aaPredicted RBP10.26□□□□□ -0.77
GEN1-207ENST00000534669 KTN1Q86UP2 1357 aaKnown RBP10.26□□□□□ -0.77
GEN1-207ENST00000534669 NME9Q86XW9 330 aa10.25□□□□□ -0.77
GEN1-207ENST00000534669 KCNH5Q8NCM2 988 aa10.25□□□□□ -0.77
GEN1-207ENST00000534669 CDCA7Q9BWT1 371 aaPredicted RBP10.25□□□□□ -0.77
GEN1-207ENST00000534669 STK32BQ9NY57 414 aa10.25□□□□□ -0.77
GEN1-207ENST00000534669 TTC21AQ8NDW8 1320 aa10.25□□□□□ -0.77
GEN1-207ENST00000534669 CCDC7Q96M83 1385 aa10.25□□□□□ -0.77
GEN1-207ENST00000534669 COL24A1Q17RW2 1714 aa10.24□□□□□ -0.77
GEN1-207ENST00000534669 RGPD2P0DJD1 1756 aa10.24□□□□□ -0.77
GEN1-207ENST00000534669 EXOC5O00471 708 aa10.24□□□□□ -0.77
GEN1-207ENST00000534669 ZNF827Q17R98 1081 aa10.24□□□□□ -0.77
GEN1-207ENST00000534669 ZNF784Q8NCA9 323 aaPredicted RBP10.24□□□□□ -0.77
GEN1-207ENST00000534669 SYT17Q9BSW7 474 aa10.24□□□□□ -0.77
GEN1-207ENST00000534669 ROCK2O75116 1388 aaKnown RBP10.24□□□□□ -0.77
GEN1-207ENST00000534669 USP31Q70CQ4 1352 aa10.24□□□□□ -0.77
GEN1-207ENST00000534669 SBNO2Q9Y2G9 1366 aa10.24□□□□□ -0.77
GEN1-207ENST00000534669 SHANK3Q9BYB0 1731 aa10.24□□□□□ -0.77
GEN1-207ENST00000534669 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.23□□□□□ -0.77
GEN1-207ENST00000534669 LRRC4BQ9NT99 713 aa10.23□□□□□ -0.77
GEN1-207ENST00000534669 QSER1Q2KHR3 1735 aa10.23□□□□□ -0.77
GEN1-207ENST00000534669 ERBB3P21860 1342 aa10.23□□□□□ -0.77
GEN1-207ENST00000534669 DOT1LQ8TEK3 1739 aa10.22□□□□□ -0.77
GEN1-207ENST00000534669 MTFR1LQ9H019 292 aa10.22□□□□□ -0.77
GEN1-207ENST00000534669 FAM208AQ9UK61 1670 aaKnown RBP10.22□□□□□ -0.77
GEN1-207ENST00000534669 NEUROD1Q13562 356 aa10.21□□□□□ -0.77
GEN1-207ENST00000534669 NLRP2Q9NX02 1062 aa10.21□□□□□ -0.77
GEN1-207ENST00000534669 POTEFA5A3E0 1075 aa10.2□□□□□ -0.78
GEN1-207ENST00000534669 LY75O60449 1722 aa10.2□□□□□ -0.78
GEN1-207ENST00000534669 SEC24BO95487 1268 aa10.2□□□□□ -0.78
GEN1-207ENST00000534669 KCNQ4P56696 695 aa10.2□□□□□ -0.78
GEN1-207ENST00000534669 ANKRD24Q8TF21 1146 aa10.2□□□□□ -0.78
GEN1-207ENST00000534669 IL2RBP14784 551 aa10.19□□□□□ -0.78
GEN1-207ENST00000534669 MAMSTRQ6ZN01 415 aa10.19□□□□□ -0.78
GEN1-207ENST00000534669 OTUD5Q96G74 571 aa10.19□□□□□ -0.78
GEN1-207ENST00000534669 ARXQ96QS3 562 aa10.19□□□□□ -0.78
GEN1-207ENST00000534669 SLC12A5Q9H2X9 1139 aa10.19□□□□□ -0.78
GEN1-207ENST00000534669 A0A1W2PP64 1363 aa10.18□□□□□ -0.78
GEN1-207ENST00000534669 NSD2O96028 1365 aa10.18□□□□□ -0.78
GEN1-207ENST00000534669 MAP3K5Q99683 1374 aa10.18□□□□□ -0.78
GEN1-207ENST00000534669 PNPLA7Q6ZV29 1317 aa10.18□□□□□ -0.78
GEN1-207ENST00000534669 FBLN1P23142 703 aa10.18□□□□□ -0.78
GEN1-207ENST00000534669 PSEN1P49768 467 aa10.18□□□□□ -0.78
GEN1-207ENST00000534669 PDAP1Q13442 181 aaKnown RBP10.18□□□□□ -0.78
GEN1-207ENST00000534669 COLQQ9Y215 455 aaPredicted RBP10.18□□□□□ -0.78
GEN1-207ENST00000534669 TMC1Q8TDI8 760 aa10.17□□□□□ -0.78
GEN1-207ENST00000534669 EDC4Q6P2E9 1401 aaKnown RBP10.16□□□□□ -0.78
GEN1-207ENST00000534669 DDX54Q8TDD1 881 aaKnown RBP10.16□□□□□ -0.78
GEN1-207ENST00000534669 LTV1Q96GA3 475 aaPredicted RBP10.16□□□□□ -0.78
GEN1-207ENST00000534669 MEGF6O75095 1541 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms