RNA–Protein interactions for RNA: ENST00000534479.5

DKK3-215, Transcript of dickkopf WNT signaling pathway inhibitor 3, humanhuman

TSL 2

Gene DKK3, Length 1,087 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3-215ENST00000534479 TATP17735 454 aaPredicted RBP26.44■■□□□ 1.82
DKK3-215ENST00000534479 SEPT12Q8IYM1 358 aa26.44■■□□□ 1.82
DKK3-215ENST00000534479 MIER1Q8N108 512 aa26.44■■□□□ 1.82
DKK3-215ENST00000534479 SHANK3Q9BYB0 1731 aa26.44■■□□□ 1.82
DKK3-215ENST00000534479 OVOS2A0A0G2JMS6 1433 aa26.42■■□□□ 1.82
DKK3-215ENST00000534479 WDR43Q15061 677 aaKnown RBP eCLIP26.42■■□□□ 1.82
DKK3-215ENST00000534479 DDB1Q16531 1140 aa26.4■■□□□ 1.82
DKK3-215ENST00000534479 TNS2Q63HR2 1409 aa26.39■■□□□ 1.82
DKK3-215ENST00000534479 CCER2I3L3R5 266 aa26.39■■□□□ 1.82
DKK3-215ENST00000534479 EXOC5O00471 708 aa26.38■■□□□ 1.81
DKK3-215ENST00000534479 RSPH6AQ9H0K4 717 aa26.38■■□□□ 1.81
DKK3-215ENST00000534479 PLEKHG2Q9H7P9 1386 aa26.37■■□□□ 1.81
DKK3-215ENST00000534479 FCHSD2O94868 740 aa26.37■■□□□ 1.81
DKK3-215ENST00000534479 ZCRB1Q8TBF4 217 aaKnown RBP26.36■■□□□ 1.81
DKK3-215ENST00000534479 PRKAR2BP31323 418 aa26.35■■□□□ 1.81
DKK3-215ENST00000534479 PDE3BQ13370 1112 aa26.35■■□□□ 1.81
DKK3-215ENST00000534479 SPG7Q9UQ90 795 aa26.34■■□□□ 1.81
DKK3-215ENST00000534479 PLEKHO1Q53GL0 409 aaPredicted RBP26.33■■□□□ 1.81
DKK3-215ENST00000534479 PNISRQ8TF01 805 aaKnown RBP26.33■■□□□ 1.81
DKK3-215ENST00000534479 PNNQ9H307 717 aaKnown RBP26.33■■□□□ 1.81
DKK3-215ENST00000534479 ADAMTS8Q9UP79 889 aa26.33■■□□□ 1.81
DKK3-215ENST00000534479 VIRMAQ69YN4 1812 aaKnown RBP26.32■■□□□ 1.8
DKK3-215ENST00000534479 KRT27Q7Z3Y8 459 aa26.32■■□□□ 1.8
DKK3-215ENST00000534479 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.32■■□□□ 1.8
DKK3-215ENST00000534479 AMOTQ4VCS5 1084 aa26.31■■□□□ 1.8
DKK3-215ENST00000534479 PCDH11XQ9BZA7 1347 aa26.31■■□□□ 1.8
DKK3-215ENST00000534479 PCDH11YQ9BZA8 1340 aa26.31■■□□□ 1.8
DKK3-215ENST00000534479 DLG5Q8TDM6 1919 aa26.3■■□□□ 1.8
DKK3-215ENST00000534479 NEFMP07197 916 aa26.3■■□□□ 1.8
DKK3-215ENST00000534479 DDX54Q8TDD1 881 aaKnown RBP26.29■■□□□ 1.8
DKK3-215ENST00000534479 ZNF530Q6P9A1 599 aaPredicted RBP26.27■■□□□ 1.8
DKK3-215ENST00000534479 FAM9BQ8IZU0 186 aa26.27■■□□□ 1.8
DKK3-215ENST00000534479 MARCH10Q8NA82 808 aaPredicted RBP26.27■■□□□ 1.8
DKK3-215ENST00000534479 PHACTR3Q96KR7 559 aa26.27■■□□□ 1.8
DKK3-215ENST00000534479 PLEKHF1Q96S99 279 aa26.27■■□□□ 1.8
DKK3-215ENST00000534479 MAPK8IP3Q9UPT6 1336 aa26.27■■□□□ 1.8
DKK3-215ENST00000534479 SBF2Q86WG5 1849 aa26.26■■□□□ 1.79
DKK3-215ENST00000534479 CCDC146Q8IYE0 955 aa26.26■■□□□ 1.79
DKK3-215ENST00000534479 CYP27B1O15528 508 aa26.25■■□□□ 1.79
DKK3-215ENST00000534479 MTHFSDQ2M296 383 aaKnown RBP26.25■■□□□ 1.79
DKK3-215ENST00000534479 DOT1LQ8TEK3 1739 aa26.25■■□□□ 1.79
DKK3-215ENST00000534479 FAM182BQ5T319 152 aa26.24■■□□□ 1.79
DKK3-215ENST00000534479 IFNL2Q8IZJ0 200 aa26.24■■□□□ 1.79
DKK3-215ENST00000534479 GAS2L2Q8NHY3 880 aa26.24■■□□□ 1.79
DKK3-215ENST00000534479 RUNDC1Q96C34 613 aa26.24■■□□□ 1.79
DKK3-215ENST00000534479 SCN11AQ9UI33 1791 aa26.23■■□□□ 1.79
DKK3-215ENST00000534479 KAT6BQ8WYB5 2073 aa26.23■■□□□ 1.79
DKK3-215ENST00000534479 C1orf141Q5JVX7 400 aa26.23■■□□□ 1.79
DKK3-215ENST00000534479 PHKG2P15735 406 aa26.22■■□□□ 1.79
DKK3-215ENST00000534479 TOGARAM1Q9Y4F4 1720 aa26.21■■□□□ 1.79
DKK3-215ENST00000534479 AKAP4Q5JQC9 854 aa26.2■■□□□ 1.78
DKK3-215ENST00000534479 ITGB4P16144 1822 aa26.2■■□□□ 1.78
DKK3-215ENST00000534479 FAM196AQ6ZSG2 479 aa26.19■■□□□ 1.78
DKK3-215ENST00000534479 HSP90AB1P08238 724 aaKnown RBP26.18■■□□□ 1.78
DKK3-215ENST00000534479 NHSQ6T4R5 1651 aa26.18■■□□□ 1.78
DKK3-215ENST00000534479 BCL9O00512 1426 aa26.17■■□□□ 1.78
DKK3-215ENST00000534479 NKX1-1Q15270 411 aaPredicted RBP26.17■■□□□ 1.78
DKK3-215ENST00000534479 NFE2L2Q16236 605 aa26.17■■□□□ 1.78
DKK3-215ENST00000534479 MAP3K5Q99683 1374 aa26.17■■□□□ 1.78
DKK3-215ENST00000534479 ADAMTS7Q9UKP4 1686 aa26.16■■□□□ 1.78
DKK3-215ENST00000534479 GNAT3A8MTJ3 354 aa26.15■■□□□ 1.78
DKK3-215ENST00000534479 MPRIPQ6WCQ1 1025 aa26.14■■□□□ 1.78
DKK3-215ENST00000534479 KDM6AO15550 1401 aaPredicted RBP26.14■■□□□ 1.77
DKK3-215ENST00000534479 TMPOP42166 694 aaKnown RBP26.13■■□□□ 1.77
DKK3-215ENST00000534479 DCAF5Q96JK2 942 aa26.13■■□□□ 1.77
DKK3-215ENST00000534479 APAF1O14727 1248 aa26.12■■□□□ 1.77
DKK3-215ENST00000534479 ACSBG1Q96GR2 724 aa26.12■■□□□ 1.77
DKK3-215ENST00000534479 RRP7AQ9Y3A4 280 aaKnown RBP26.12■■□□□ 1.77
DKK3-215ENST00000534479 RIPK4P57078 832 aa26.11■■□□□ 1.77
DKK3-215ENST00000534479 NEUROD2Q15784 382 aa26.11■■□□□ 1.77
DKK3-215ENST00000534479 TNS1Q9HBL0 1735 aaKnown RBP26.11■■□□□ 1.77
DKK3-215ENST00000534479 BTAF1O14981 1849 aa26.1■■□□□ 1.77
DKK3-215ENST00000534479 RTF1Q92541 710 aaKnown RBP26.1■■□□□ 1.77
DKK3-215ENST00000534479 RNMTO43148 476 aaKnown RBP26.09■■□□□ 1.77
DKK3-215ENST00000534479 SIPA1L3O60292 1781 aaPredicted RBP26.09■■□□□ 1.77
DKK3-215ENST00000534479 HTATSF1O43719 755 aaKnown RBP26.08■■□□□ 1.77
DKK3-215ENST00000534479 SYTL4Q96C24 671 aaPredicted RBP26.08■■□□□ 1.77
DKK3-215ENST00000534479 LGR6Q9HBX8 967 aa26.08■■□□□ 1.77
DKK3-215ENST00000534479 TRIM37O94972 964 aa26.07■■□□□ 1.76
DKK3-215ENST00000534479 ERVV-2B6SEH9 535 aa26.06■■□□□ 1.76
DKK3-215ENST00000534479 PRIM1P49642 420 aaKnown RBP26.06■■□□□ 1.76
DKK3-215ENST00000534479 LMOD3Q0VAK6 560 aa26.06■■□□□ 1.76
DKK3-215ENST00000534479 MRC1P22897 1456 aa26.05■■□□□ 1.76
DKK3-215ENST00000534479 SENP3-EIF4A1A0A087X0R7 540 aa26.05■■□□□ 1.76
DKK3-215ENST00000534479 KCNQ2O43526 872 aa26.05■■□□□ 1.76
DKK3-215ENST00000534479 MCM10Q7L590 875 aa26.05■■□□□ 1.76
DKK3-215ENST00000534479 IL17REQ8NFR9 667 aa26.05■■□□□ 1.76
DKK3-215ENST00000534479 CABP4P57796 275 aa26.04■■□□□ 1.76
DKK3-215ENST00000534479 DCTN1Q14203 1278 aa26.04■■□□□ 1.76
DKK3-215ENST00000534479 BCL11BQ9C0K0 894 aaPredicted RBP26.04■■□□□ 1.76
DKK3-215ENST00000534479 TMOD3Q9NYL9 352 aa26.03■■□□□ 1.76
DKK3-215ENST00000534479 CEMIPQ8WUJ3 1361 aa26.03■■□□□ 1.76
DKK3-215ENST00000534479 TEFQ10587 303 aa26.02■■□□□ 1.76
DKK3-215ENST00000534479 PTF1AQ7RTS3 328 aa26.01■■□□□ 1.75
DKK3-215ENST00000534479 SLC52A2Q9HAB3 445 aa26.01■■□□□ 1.75
DKK3-215ENST00000534479 TRIM35Q9UPQ4 493 aa26.01■■□□□ 1.75
DKK3-215ENST00000534479 NFATC2IPQ8NCF5 419 aa26■■□□□ 1.75
DKK3-215ENST00000534479 PIGBQ92521 554 aa25.99■■□□□ 1.75
DKK3-215ENST00000534479 THUMPD2Q9BTF0 503 aaKnown RBP25.99■■□□□ 1.75
DKK3-215ENST00000534479 PAPPAQ13219 1627 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms