RNA–Protein interactions for RNA: ENST00000533957.1

CLNS1A-212, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 4

Gene CLNS1A, Length 369 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-212ENST00000533957 KDF1Q8NAX2 398 aaPredicted RBP9.04□□□□□ -0.96
CLNS1A-212ENST00000533957 ADH1AP07327 375 aa9.03□□□□□ -0.96
CLNS1A-212ENST00000533957 PTGIRP43119 386 aa9.03□□□□□ -0.96
CLNS1A-212ENST00000533957 SEPT12Q8IYM1 358 aa9.03□□□□□ -0.96
CLNS1A-212ENST00000533957 PCGF6Q9BYE7 350 aa9.03□□□□□ -0.96
CLNS1A-212ENST00000533957 POLMQ9NP87 494 aaPredicted RBP9.03□□□□□ -0.96
CLNS1A-212ENST00000533957 RNF217Q8TC41 542 aa9.02□□□□□ -0.97
CLNS1A-212ENST00000533957 GJD4Q96KN9 370 aaPredicted RBP9.02□□□□□ -0.97
CLNS1A-212ENST00000533957 CNTNAP3BQ96NU0 1288 aa9.02□□□□□ -0.97
CLNS1A-212ENST00000533957 CNTNAP3Q9BZ76 1288 aa9.02□□□□□ -0.97
CLNS1A-212ENST00000533957 ZBBXA8MT70 800 aa9.01□□□□□ -0.97
CLNS1A-212ENST00000533957 ITGA6P23229 1130 aa9.01□□□□□ -0.97
CLNS1A-212ENST00000533957 VWA5B2Q8N398 1253 aa9.01□□□□□ -0.97
CLNS1A-212ENST00000533957 COL25A1Q9BXS0 654 aaPredicted RBP9.01□□□□□ -0.97
CLNS1A-212ENST00000533957 GIGYF1O75420 1035 aaPredicted RBP9□□□□□ -0.97
CLNS1A-212ENST00000533957 CCDC88BA6NC98 1476 aa9□□□□□ -0.97
CLNS1A-212ENST00000533957 CFTRP13569 1480 aa9□□□□□ -0.97
CLNS1A-212ENST00000533957 ERCC6Q03468 1493 aa9□□□□□ -0.97
CLNS1A-212ENST00000533957 SENP3-EIF4A1A0A087X0R7 540 aa8.99□□□□□ -0.97
CLNS1A-212ENST00000533957 FBXO45P0C2W1 286 aa8.99□□□□□ -0.97
CLNS1A-212ENST00000533957 CYLDQ9NQC7 956 aa8.99□□□□□ -0.97
CLNS1A-212ENST00000533957 PCDHB9Q9Y5E1 797 aa8.99□□□□□ -0.97
CLNS1A-212ENST00000533957 CADPSQ9ULU8 1353 aa8.99□□□□□ -0.97
CLNS1A-212ENST00000533957 FOXD4L5Q5VV16 416 aaPredicted RBP8.98□□□□□ -0.97
CLNS1A-212ENST00000533957 SV2AQ7L0J3 742 aa8.98□□□□□ -0.97
CLNS1A-212ENST00000533957 TRIM52Q96A61 297 aa8.98□□□□□ -0.97
CLNS1A-212ENST00000533957 RNFT1Q5M7Z0 435 aa8.97□□□□□ -0.97
CLNS1A-212ENST00000533957 EEA1Q15075 1411 aa8.97□□□□□ -0.97
CLNS1A-212ENST00000533957 LOC105371045A0A1W2PR82 267 aa8.96□□□□□ -0.98
CLNS1A-212ENST00000533957 CDC14CA4D256 554 aa8.96□□□□□ -0.98
CLNS1A-212ENST00000533957 RNF144AP50876 292 aaPredicted RBP8.96□□□□□ -0.98
CLNS1A-212ENST00000533957 BRPF1P55201 1214 aaPredicted RBP8.96□□□□□ -0.98
CLNS1A-212ENST00000533957 LYSMD3Q7Z3D4 306 aa8.96□□□□□ -0.98
CLNS1A-212ENST00000533957 PDS5BQ9NTI5 1447 aa8.96□□□□□ -0.98
CLNS1A-212ENST00000533957 CUX2O14529 1486 aa8.96□□□□□ -0.98
CLNS1A-212ENST00000533957 WDR62O43379 1518 aa8.95□□□□□ -0.98
CLNS1A-212ENST00000533957 CCDC125Q86Z20 511 aa8.95□□□□□ -0.98
CLNS1A-212ENST00000533957 CEP164Q9UPV0 1460 aa8.95□□□□□ -0.98
CLNS1A-212ENST00000533957 KCNMA1Q12791 1236 aa8.94□□□□□ -0.98
CLNS1A-212ENST00000533957 PRICKLE2Q7Z3G6 844 aa8.94□□□□□ -0.98
CLNS1A-212ENST00000533957 BANK1Q8NDB2 785 aa8.94□□□□□ -0.98
CLNS1A-212ENST00000533957 ADAMTS8Q9UP79 889 aa8.94□□□□□ -0.98
CLNS1A-212ENST00000533957 ATP5J2-PTCD1G3V325 749 aa8.93□□□□□ -0.98
CLNS1A-212ENST00000533957 MCCD1P59942 119 aaPredicted RBP8.93□□□□□ -0.98
CLNS1A-212ENST00000533957 RNF20Q5VTR2 975 aa8.93□□□□□ -0.98
CLNS1A-212ENST00000533957 FANCD2Q9BXW9 1451 aa8.93□□□□□ -0.98
CLNS1A-212ENST00000533957 MRC2Q9UBG0 1479 aa8.92□□□□□ -0.98
CLNS1A-212ENST00000533957 SLURP2P0DP57 97 aa8.92□□□□□ -0.98
CLNS1A-212ENST00000533957 GSK3AP49840 483 aa8.92□□□□□ -0.98
CLNS1A-212ENST00000533957 NR1H3Q13133 447 aa8.92□□□□□ -0.98
CLNS1A-212ENST00000533957 ZNF385CQ66K41 422 aaPredicted RBP8.92□□□□□ -0.98
CLNS1A-212ENST00000533957 A0A1W2PRU2 124 aa8.91□□□□□ -0.98
CLNS1A-212ENST00000533957 ERVK-9P63128 1117 aa8.91□□□□□ -0.98
CLNS1A-212ENST00000533957 CC2D2BQ6DHV5 1058 aa8.91□□□□□ -0.98
CLNS1A-212ENST00000533957 WHAMMQ8TF30 809 aa8.91□□□□□ -0.98
CLNS1A-212ENST00000533957 CUEDC1Q9NWM3 386 aaPredicted RBP8.91□□□□□ -0.98
CLNS1A-212ENST00000533957 MEN1O00255 615 aa8.9□□□□□ -0.98
CLNS1A-212ENST00000533957 RHOQP17081 205 aa8.9□□□□□ -0.98
CLNS1A-212ENST00000533957 GPC1P35052 558 aa8.9□□□□□ -0.98
CLNS1A-212ENST00000533957 MTMR14Q8NCE2 650 aa8.9□□□□□ -0.98
CLNS1A-212ENST00000533957 SOCS7O14512 581 aa8.89□□□□□ -0.99
CLNS1A-212ENST00000533957 GPR37L1O60883 481 aa8.89□□□□□ -0.99
CLNS1A-212ENST00000533957 SNRKQ9NRH2 765 aa8.89□□□□□ -0.99
CLNS1A-212ENST00000533957 SCTRP47872 440 aa8.88□□□□□ -0.99
CLNS1A-212ENST00000533957 SVOPQ8N4V2 548 aa8.88□□□□□ -0.99
CLNS1A-212ENST00000533957 ZNF592Q92610 1267 aa8.88□□□□□ -0.99
CLNS1A-212ENST00000533957 ZNF330Q9Y3S2 320 aaPredicted RBP8.88□□□□□ -0.99
CLNS1A-212ENST00000533957 DNMBPQ6XZF7 1577 aa8.87□□□□□ -0.99
CLNS1A-212ENST00000533957 URB2Q14146 1524 aaKnown RBP8.87□□□□□ -0.99
CLNS1A-212ENST00000533957 ARHGEF15O94989 841 aa8.87□□□□□ -0.99
CLNS1A-212ENST00000533957 GRIP2Q9C0E4 1043 aa8.87□□□□□ -0.99
CLNS1A-212ENST00000533957 NDUFB9Q9Y6M9 179 aa8.87□□□□□ -0.99
CLNS1A-212ENST00000533957 ADAMTS2O95450 1211 aa8.86□□□□□ -0.99
CLNS1A-212ENST00000533957 RASSF7Q02833 373 aa8.86□□□□□ -0.99
CLNS1A-212ENST00000533957 POU4F2Q12837 409 aa8.86□□□□□ -0.99
CLNS1A-212ENST00000533957 TRIM22Q8IYM9 498 aa8.86□□□□□ -0.99
CLNS1A-212ENST00000533957 GMCL1Q96IK5 515 aa8.86□□□□□ -0.99
CLNS1A-212ENST00000533957 NLRP3Q96P20 1036 aa8.86□□□□□ -0.99
CLNS1A-212ENST00000533957 PCDHB11Q9Y5F2 797 aa8.86□□□□□ -0.99
CLNS1A-212ENST00000533957 TRAK2O60296 914 aa8.85□□□□□ -0.99
CLNS1A-212ENST00000533957 SRSF11Q05519 484 aaKnown RBP8.85□□□□□ -0.99
CLNS1A-212ENST00000533957 CLN3Q13286 438 aa8.85□□□□□ -0.99
CLNS1A-212ENST00000533957 GAS6Q14393 721 aa8.85□□□□□ -0.99
CLNS1A-212ENST00000533957 DBN1Q16643 649 aa8.85□□□□□ -0.99
CLNS1A-212ENST00000533957 SLC27A3Q5K4L6 730 aa8.85□□□□□ -0.99
CLNS1A-212ENST00000533957 CYP2U1Q7Z449 544 aa8.85□□□□□ -0.99
CLNS1A-212ENST00000533957 TMEM151AQ8N4L1 468 aa8.85□□□□□ -0.99
CLNS1A-212ENST00000533957 OSBPL3Q9H4L5 887 aa8.85□□□□□ -0.99
CLNS1A-212ENST00000533957 DYRK1BQ9Y463 629 aa8.85□□□□□ -0.99
CLNS1A-212ENST00000533957 WDR97A6NE52 1622 aa8.84□□□□□ -0.99
CLNS1A-212ENST00000533957 GDF11O95390 407 aa8.84□□□□□ -0.99
CLNS1A-212ENST00000533957 WRNQ14191 1432 aaPredicted RBP eCLIP8.84□□□□□ -0.99
CLNS1A-212ENST00000533957 KCTD17Q8N5Z5 321 aa8.84□□□□□ -0.99
CLNS1A-212ENST00000533957 ZNF837Q96EG3 531 aaPredicted RBP8.84□□□□□ -0.99
CLNS1A-212ENST00000533957 ESF1Q9H501 851 aaKnown RBP8.84□□□□□ -0.99
CLNS1A-212ENST00000533957 APBB1O00213 710 aa8.83□□□□□ -1
CLNS1A-212ENST00000533957 LYPD4Q6UWN0 246 aa8.83□□□□□ -1
CLNS1A-212ENST00000533957 RIPOR1Q6ZS17 1223 aa8.83□□□□□ -1
CLNS1A-212ENST00000533957 CEP126Q9P2H0 1117 aa8.83□□□□□ -1
CLNS1A-212ENST00000533957 TOPBP1Q92547 1522 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms