RNA–Protein interactions for RNA: ENST00000533299.2

LMO7-223, Transcript of LIM domain 7, humanhuman

TSL 3

Gene LMO7, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-223ENST00000533299 ACDQ96AP0 544 aa6.79□□□□□ -1.32
LMO7-223ENST00000533299 CFAP99D6REC4 459 aa6.78□□□□□ -1.32
LMO7-223ENST00000533299 RAD21O60216 631 aa6.78□□□□□ -1.32
LMO7-223ENST00000533299 USP17L8P0C7I0 530 aa6.78□□□□□ -1.32
LMO7-223ENST00000533299 UBTFP17480 764 aaKnown RBP6.78□□□□□ -1.32
LMO7-223ENST00000533299 COL8A1P27658 744 aa6.78□□□□□ -1.32
LMO7-223ENST00000533299 SENP3-EIF4A1A0A087X0R7 540 aa6.77□□□□□ -1.33
LMO7-223ENST00000533299 CTDSPL2Q05D32 466 aa6.77□□□□□ -1.33
LMO7-223ENST00000533299 MCM6Q14566 821 aa6.77□□□□□ -1.33
LMO7-223ENST00000533299 Q6ZVU0 165 aa6.77□□□□□ -1.33
LMO7-223ENST00000533299 NBPF11Q86T75 865 aa6.77□□□□□ -1.33
LMO7-223ENST00000533299 PNMA1Q8ND90 353 aa6.77□□□□□ -1.33
LMO7-223ENST00000533299 FOXJ1Q92949 421 aa6.77□□□□□ -1.33
LMO7-223ENST00000533299 KRTAP4-9Q9BYQ8 210 aa6.77□□□□□ -1.33
LMO7-223ENST00000533299 MAP4K5Q9Y4K4 846 aa6.77□□□□□ -1.33
LMO7-223ENST00000533299 OIP5O43482 229 aa6.76□□□□□ -1.33
LMO7-223ENST00000533299 FBXO31Q5XUX0 539 aaPredicted RBP6.76□□□□□ -1.33
LMO7-223ENST00000533299 C1QTNF9BB2RNN3 333 aa6.76□□□□□ -1.33
LMO7-223ENST00000533299 FOXR1Q6PIV2 292 aa6.76□□□□□ -1.33
LMO7-223ENST00000533299 WWC1Q8IX03 1113 aa6.76□□□□□ -1.33
LMO7-223ENST00000533299 COBLO75128 1261 aa6.75□□□□□ -1.33
LMO7-223ENST00000533299 LYPD8Q6UX82 237 aa6.75□□□□□ -1.33
LMO7-223ENST00000533299 SNRPNP63162 240 aaKnown RBP6.74□□□□□ -1.33
LMO7-223ENST00000533299 SNRKQ9NRH2 765 aa6.74□□□□□ -1.33
LMO7-223ENST00000533299 CCDC116Q8IYX3 515 aa6.73□□□□□ -1.33
LMO7-223ENST00000533299 ZMYND15Q9H091 742 aa6.73□□□□□ -1.33
LMO7-223ENST00000533299 TIMELESSQ9UNS1 1208 aa6.73□□□□□ -1.33
LMO7-223ENST00000533299 PIK3R2O00459 728 aa6.73□□□□□ -1.33
LMO7-223ENST00000533299 PGPEP1Q9NXJ5 209 aa6.73□□□□□ -1.33
LMO7-223ENST00000533299 NSFL1CQ9UNZ2 370 aaKnown RBP6.73□□□□□ -1.33
LMO7-223ENST00000533299 FSHRP23945 695 aa6.72□□□□□ -1.33
LMO7-223ENST00000533299 CTHP32929 405 aa6.72□□□□□ -1.33
LMO7-223ENST00000533299 FOXD4L6Q3SYB3 417 aaPredicted RBP6.72□□□□□ -1.33
LMO7-223ENST00000533299 FOXD4L3Q6VB84 417 aaPredicted RBP6.72□□□□□ -1.33
LMO7-223ENST00000533299 CD163Q86VB7 1156 aa6.72□□□□□ -1.33
LMO7-223ENST00000533299 BPHLQ86WA6 291 aaPredicted RBP6.72□□□□□ -1.33
LMO7-223ENST00000533299 MTMR14Q8NCE2 650 aa6.72□□□□□ -1.33
LMO7-223ENST00000533299 CUEDC1Q9NWM3 386 aaPredicted RBP6.72□□□□□ -1.33
LMO7-223ENST00000533299 NDUFB9Q9Y6M9 179 aa6.72□□□□□ -1.33
LMO7-223ENST00000533299 ARMC2Q8NEN0 867 aa6.71□□□□□ -1.33
LMO7-223ENST00000533299 LRRN4Q8WUT4 740 aa6.71□□□□□ -1.33
LMO7-223ENST00000533299 C1QTNF2Q9BXJ5 285 aa6.71□□□□□ -1.33
LMO7-223ENST00000533299 PER1O15534 1290 aaPredicted RBP6.71□□□□□ -1.34
LMO7-223ENST00000533299 YBX3P16989 372 aaKnown RBP eCLIP6.71□□□□□ -1.34
LMO7-223ENST00000533299 TRIM22Q8IYM9 498 aa6.71□□□□□ -1.34
LMO7-223ENST00000533299 A6NJR5 290 aa6.7□□□□□ -1.34
LMO7-223ENST00000533299 CTSOP43234 321 aaPredicted RBP6.7□□□□□ -1.34
LMO7-223ENST00000533299 DOC2BQ14184 412 aa6.7□□□□□ -1.34
LMO7-223ENST00000533299 C4orf48Q5BLP8 95 aa6.7□□□□□ -1.34
LMO7-223ENST00000533299 RNF217Q8TC41 542 aa6.7□□□□□ -1.34
LMO7-223ENST00000533299 ZNF837Q96EG3 531 aaPredicted RBP6.7□□□□□ -1.34
LMO7-223ENST00000533299 KRTAP4-2Q9BYR5 136 aa6.7□□□□□ -1.34
LMO7-223ENST00000533299 GRIN2CQ14957 1233 aa6.69□□□□□ -1.34
LMO7-223ENST00000533299 AGERQ15109 404 aa6.69□□□□□ -1.34
LMO7-223ENST00000533299 NR6A1Q15406 480 aa6.69□□□□□ -1.34
LMO7-223ENST00000533299 TRMT44Q8IYL2 757 aaKnown RBP6.69□□□□□ -1.34
LMO7-223ENST00000533299 COG6Q9Y2V7 657 aa6.69□□□□□ -1.34
LMO7-223ENST00000533299 VASH1Q7L8A9 365 aaPredicted RBP6.68□□□□□ -1.34
LMO7-223ENST00000533299 GJD4Q96KN9 370 aaPredicted RBP6.68□□□□□ -1.34
LMO7-223ENST00000533299 HMX1Q9NP08 348 aaPredicted RBP6.68□□□□□ -1.34
LMO7-223ENST00000533299 ZC3H4Q9UPT8 1303 aaKnown RBP6.68□□□□□ -1.34
LMO7-223ENST00000533299 F12P00748 615 aaPredicted RBP6.67□□□□□ -1.34
LMO7-223ENST00000533299 ABL2P42684 1182 aa6.67□□□□□ -1.34
LMO7-223ENST00000533299 CBLBQ13191 982 aa6.67□□□□□ -1.34
LMO7-223ENST00000533299 PROSER2Q86WR7 435 aaPredicted RBP6.67□□□□□ -1.34
LMO7-223ENST00000533299 GPKOWQ92917 476 aaPredicted RBP eCLIP6.67□□□□□ -1.34
LMO7-223ENST00000533299 CLUAP1Q96AJ1 413 aa6.67□□□□□ -1.34
LMO7-223ENST00000533299 GDPD2Q9HCC8 539 aa6.67□□□□□ -1.34
LMO7-223ENST00000533299 TXKP42681 527 aa6.66□□□□□ -1.34
LMO7-223ENST00000533299 MAP2K3P46734 347 aa6.66□□□□□ -1.34
LMO7-223ENST00000533299 WASHC4Q2M389 1173 aa6.66□□□□□ -1.34
LMO7-223ENST00000533299 NBPF14Q5TI25 921 aa6.66□□□□□ -1.34
LMO7-223ENST00000533299 TRIM34Q9BYJ4 488 aa6.66□□□□□ -1.34
LMO7-223ENST00000533299 KRTAP17-1Q9BYP8 105 aa6.66□□□□□ -1.34
LMO7-223ENST00000533299 POLMQ9NP87 494 aaPredicted RBP6.66□□□□□ -1.34
LMO7-223ENST00000533299 TRERF1Q96PN7 1200 aa6.66□□□□□ -1.34
LMO7-223ENST00000533299 INSM2Q96T92 566 aaPredicted RBP6.66□□□□□ -1.34
LMO7-223ENST00000533299 OXCT2Q9BYC2 517 aaPredicted RBP6.66□□□□□ -1.34
LMO7-223ENST00000533299 MAP10Q9P2G4 905 aa6.66□□□□□ -1.34
LMO7-223ENST00000533299 FKBPLQ9UIM3 349 aa6.66□□□□□ -1.34
LMO7-223ENST00000533299 TBC1D2BQ9UPU7 963 aa6.66□□□□□ -1.34
LMO7-223ENST00000533299 CHRNA4P43681 627 aa6.65□□□□□ -1.34
LMO7-223ENST00000533299 PPP1R26Q5T8A7 1209 aaPredicted RBP6.65□□□□□ -1.34
LMO7-223ENST00000533299 LINC00114Q6XXX2 140 aa6.65□□□□□ -1.34
LMO7-223ENST00000533299 MX2P20592 715 aa6.64□□□□□ -1.35
LMO7-223ENST00000533299 RSPO4Q2I0M5 234 aaPredicted RBP6.64□□□□□ -1.35
LMO7-223ENST00000533299 POM121Q96HA1 1249 aa6.64□□□□□ -1.35
LMO7-223ENST00000533299 ZNF330Q9Y3S2 320 aaPredicted RBP6.64□□□□□ -1.35
LMO7-223ENST00000533299 ARID1BQ8NFD5 2236 aaPredicted RBP6.64□□□□□ -1.35
LMO7-223ENST00000533299 GPR25O00155 361 aa6.64□□□□□ -1.35
LMO7-223ENST00000533299 EPS8L1Q8TE68 723 aa6.64□□□□□ -1.35
LMO7-223ENST00000533299 ZNF592Q92610 1267 aa6.64□□□□□ -1.35
LMO7-223ENST00000533299 SUV39H2Q9H5I1 410 aa6.64□□□□□ -1.35
LMO7-223ENST00000533299 RRAGCQ9HB90 399 aa6.64□□□□□ -1.35
LMO7-223ENST00000533299 SHISA8B8ZZ34 492 aa6.63□□□□□ -1.35
LMO7-223ENST00000533299 GNB5O14775 395 aa6.63□□□□□ -1.35
LMO7-223ENST00000533299 GATA4P43694 442 aa6.63□□□□□ -1.35
LMO7-223ENST00000533299 NOP53Q9NZM5 478 aaKnown RBP6.63□□□□□ -1.35
LMO7-223ENST00000533299 GPSM3Q9Y4H4 160 aa6.63□□□□□ -1.35
LMO7-223ENST00000533299 H7C1W4 665 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms