RNA–Protein interactions for RNA: ENST00000532249.1

SOX9-AS1-209, SOX9 antisense RNA 1, humanhuman

TSL 3

Gene SOX9-AS1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-209ENST00000532249 CCDC9Q9Y3X0 531 aaKnown RBP7.49□□□□□ -1.21
SOX9-AS1-209ENST00000532249 MAP3K19Q56UN5 1328 aa7.49□□□□□ -1.21
SOX9-AS1-209ENST00000532249 SPATA31A5Q5VU36 1347 aa7.49□□□□□ -1.21
SOX9-AS1-209ENST00000532249 SPATA31A7Q8IWB4 1347 aa7.49□□□□□ -1.21
SOX9-AS1-209ENST00000532249 ZBTB7CA1YPR0 619 aa7.48□□□□□ -1.21
SOX9-AS1-209ENST00000532249 CSB-PGBD3P0DP91 1061 aa7.48□□□□□ -1.21
SOX9-AS1-209ENST00000532249 HOXC9P31274 260 aa7.48□□□□□ -1.21
SOX9-AS1-209ENST00000532249 CARD10Q9BWT7 1032 aa7.48□□□□□ -1.21
SOX9-AS1-209ENST00000532249 LRRC37A3O60309 1634 aa7.48□□□□□ -1.21
SOX9-AS1-209ENST00000532249 SPATA31A1Q5TZJ5 1347 aa7.48□□□□□ -1.21
SOX9-AS1-209ENST00000532249 BRWD3Q6RI45 1802 aa7.48□□□□□ -1.21
SOX9-AS1-209ENST00000532249 RGPD1P0DJD0 1748 aa7.47□□□□□ -1.21
SOX9-AS1-209ENST00000532249 RGS12O14924 1447 aa7.47□□□□□ -1.21
SOX9-AS1-209ENST00000532249 RALBP1Q15311 655 aa7.47□□□□□ -1.21
SOX9-AS1-209ENST00000532249 CHRNA2Q15822 529 aa7.47□□□□□ -1.21
SOX9-AS1-209ENST00000532249 TOM1L2Q6ZVM7 507 aa7.47□□□□□ -1.21
SOX9-AS1-209ENST00000532249 TCP11L2Q8N4U5 519 aa7.47□□□□□ -1.21
SOX9-AS1-209ENST00000532249 ANKRD24Q8TF21 1146 aa7.47□□□□□ -1.21
SOX9-AS1-209ENST00000532249 CFAP53Q96M91 514 aa7.47□□□□□ -1.21
SOX9-AS1-209ENST00000532249 STRN4Q9NRL3 753 aa7.47□□□□□ -1.21
SOX9-AS1-209ENST00000532249 PKD1L3Q7Z443 1732 aa7.47□□□□□ -1.21
SOX9-AS1-209ENST00000532249 PARD3Q8TEW0 1356 aa7.46□□□□□ -1.21
SOX9-AS1-209ENST00000532249 RGPD2P0DJD1 1756 aa7.46□□□□□ -1.21
SOX9-AS1-209ENST00000532249 ONECUT3O60422 494 aaPredicted RBP7.46□□□□□ -1.22
SOX9-AS1-209ENST00000532249 NCAPD2Q15021 1401 aa7.45□□□□□ -1.22
SOX9-AS1-209ENST00000532249 TNS2Q63HR2 1409 aa7.45□□□□□ -1.22
SOX9-AS1-209ENST00000532249 FBLN1P23142 703 aa7.45□□□□□ -1.22
SOX9-AS1-209ENST00000532249 CDAN1Q8IWY9 1227 aa7.45□□□□□ -1.22
SOX9-AS1-209ENST00000532249 RGPD3A6NKT7 1758 aaPredicted RBP7.45□□□□□ -1.22
SOX9-AS1-209ENST00000532249 RGPD4Q7Z3J3 1758 aa7.45□□□□□ -1.22
SOX9-AS1-209ENST00000532249 OVOS2A0A0G2JMS6 1433 aa7.44□□□□□ -1.22
SOX9-AS1-209ENST00000532249 A0A0G2JS52 829 aa7.44□□□□□ -1.22
SOX9-AS1-209ENST00000532249 PPM1GO15355 546 aaPredicted RBP7.44□□□□□ -1.22
SOX9-AS1-209ENST00000532249 MYT1Q01538 1121 aa7.44□□□□□ -1.22
SOX9-AS1-209ENST00000532249 RRS1Q15050 365 aaKnown RBP7.44□□□□□ -1.22
SOX9-AS1-209ENST00000532249 CC2D1BQ5T0F9 858 aaKnown RBP7.44□□□□□ -1.22
SOX9-AS1-209ENST00000532249 LARP1Q6PKG0 1096 aaKnown RBP7.44□□□□□ -1.22
SOX9-AS1-209ENST00000532249 POLKQ9UBT6 870 aa7.44□□□□□ -1.22
SOX9-AS1-209ENST00000532249 AXIN2Q9Y2T1 843 aa7.44□□□□□ -1.22
SOX9-AS1-209ENST00000532249 DISP2A7MBM2 1401 aa7.44□□□□□ -1.22
SOX9-AS1-209ENST00000532249 BCL9O00512 1426 aa7.44□□□□□ -1.22
SOX9-AS1-209ENST00000532249 IL2RBP14784 551 aa7.43□□□□□ -1.22
SOX9-AS1-209ENST00000532249 HMGB2P26583 209 aaKnown RBP7.43□□□□□ -1.22
SOX9-AS1-209ENST00000532249 DDX10Q13206 875 aaKnown RBP7.43□□□□□ -1.22
SOX9-AS1-209ENST00000532249 CCDC125Q86Z20 511 aa7.43□□□□□ -1.22
SOX9-AS1-209ENST00000532249 PROM2Q8N271 834 aa7.43□□□□□ -1.22
SOX9-AS1-209ENST00000532249 RAPGEF4Q8WZA2 1011 aa7.43□□□□□ -1.22
SOX9-AS1-209ENST00000532249 PNNQ9H307 717 aaKnown RBP7.43□□□□□ -1.22
SOX9-AS1-209ENST00000532249 NLRP2Q9NX02 1062 aa7.43□□□□□ -1.22
SOX9-AS1-209ENST00000532249 NUDCQ9Y266 331 aa7.43□□□□□ -1.22
SOX9-AS1-209ENST00000532249 MYBBP1AQ9BQG0 1328 aaKnown RBP7.43□□□□□ -1.22
SOX9-AS1-209ENST00000532249 SHANK3Q9BYB0 1731 aa7.43□□□□□ -1.22
SOX9-AS1-209ENST00000532249 SBF2Q86WG5 1849 aa7.43□□□□□ -1.22
SOX9-AS1-209ENST00000532249 TNNT2P45379 298 aaPredicted RBP7.42□□□□□ -1.22
SOX9-AS1-209ENST00000532249 PDE3BQ13370 1112 aa7.42□□□□□ -1.22
SOX9-AS1-209ENST00000532249 DDB1Q16531 1140 aa7.42□□□□□ -1.22
SOX9-AS1-209ENST00000532249 FAM98CQ17RN3 349 aaKnown RBP7.42□□□□□ -1.22
SOX9-AS1-209ENST00000532249 LCE2DQ5TA82 110 aaPredicted RBP7.42□□□□□ -1.22
SOX9-AS1-209ENST00000532249 KRT27Q7Z3Y8 459 aa7.42□□□□□ -1.22
SOX9-AS1-209ENST00000532249 SCUBE2Q9NQ36 999 aa7.42□□□□□ -1.22
SOX9-AS1-209ENST00000532249 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.42□□□□□ -1.22
SOX9-AS1-209ENST00000532249 EMILIN1Q9Y6C2 1016 aa7.42□□□□□ -1.22
SOX9-AS1-209ENST00000532249 VIRMAQ69YN4 1812 aaKnown RBP7.42□□□□□ -1.22
SOX9-AS1-209ENST00000532249 IGSF1Q8N6C5 1336 aa7.42□□□□□ -1.22
SOX9-AS1-209ENST00000532249 KDRP35968 1356 aa7.42□□□□□ -1.22
SOX9-AS1-209ENST00000532249 COL3A1P02461 1466 aaPredicted RBP7.42□□□□□ -1.22
SOX9-AS1-209ENST00000532249 NHSQ6T4R5 1651 aa7.41□□□□□ -1.22
SOX9-AS1-209ENST00000532249 EXOC5O00471 708 aa7.41□□□□□ -1.22
SOX9-AS1-209ENST00000532249 ANP32CO43423 234 aa7.41□□□□□ -1.22
SOX9-AS1-209ENST00000532249 DIAPH1O60610 1272 aaKnown RBP7.41□□□□□ -1.22
SOX9-AS1-209ENST00000532249 NEFMP07197 916 aa7.41□□□□□ -1.22
SOX9-AS1-209ENST00000532249 TATP17735 454 aaPredicted RBP7.41□□□□□ -1.22
SOX9-AS1-209ENST00000532249 MTHFSP49914 203 aa7.41□□□□□ -1.22
SOX9-AS1-209ENST00000532249 CNGB1Q14028 1251 aaPredicted RBP7.41□□□□□ -1.22
SOX9-AS1-209ENST00000532249 HSP90AB2PQ58FF8 381 aa7.41□□□□□ -1.22
SOX9-AS1-209ENST00000532249 SEPT12Q8IYM1 358 aa7.41□□□□□ -1.22
SOX9-AS1-209ENST00000532249 USP35Q9P2H5 1018 aa7.41□□□□□ -1.22
SOX9-AS1-209ENST00000532249 METRNQ9UJH8 293 aa7.41□□□□□ -1.22
SOX9-AS1-209ENST00000532249 PCDH11XQ9BZA7 1347 aa7.41□□□□□ -1.22
SOX9-AS1-209ENST00000532249 PCDH11YQ9BZA8 1340 aa7.41□□□□□ -1.22
SOX9-AS1-209ENST00000532249 PPP2R1AP30153 589 aa7.4□□□□□ -1.22
SOX9-AS1-209ENST00000532249 EIF4A2Q14240 407 aaKnown RBP7.4□□□□□ -1.22
SOX9-AS1-209ENST00000532249 AMOTQ4VCS5 1084 aa7.4□□□□□ -1.22
SOX9-AS1-209ENST00000532249 FAM182BQ5T319 152 aa7.4□□□□□ -1.22
SOX9-AS1-209ENST00000532249 FAM196AQ6ZSG2 479 aa7.4□□□□□ -1.22
SOX9-AS1-209ENST00000532249 LTV1Q96GA3 475 aaPredicted RBP7.4□□□□□ -1.22
SOX9-AS1-209ENST00000532249 SPG7Q9UQ90 795 aa7.4□□□□□ -1.22
SOX9-AS1-209ENST00000532249 DOT1LQ8TEK3 1739 aa7.4□□□□□ -1.23
SOX9-AS1-209ENST00000532249 TNS1Q9HBL0 1735 aaKnown RBP7.4□□□□□ -1.23
SOX9-AS1-209ENST00000532249 MEGF6O75095 1541 aa7.39□□□□□ -1.23
SOX9-AS1-209ENST00000532249 HSP90AB1P08238 724 aaKnown RBP7.39□□□□□ -1.23
SOX9-AS1-209ENST00000532249 C7P10643 843 aa7.39□□□□□ -1.23
SOX9-AS1-209ENST00000532249 SF3B2Q13435 895 aaKnown RBP7.39□□□□□ -1.23
SOX9-AS1-209ENST00000532249 PELP1Q8IZL8 1130 aaKnown RBP7.39□□□□□ -1.23
SOX9-AS1-209ENST00000532249 PRKRIP1Q9H875 184 aaPredicted RBP7.39□□□□□ -1.23
SOX9-AS1-209ENST00000532249 SCN11AQ9UI33 1791 aa7.38□□□□□ -1.23
SOX9-AS1-209ENST00000532249 IL13P35225 146 aa7.38□□□□□ -1.23
SOX9-AS1-209ENST00000532249 NBPF6Q5VWK0 638 aa7.38□□□□□ -1.23
SOX9-AS1-209ENST00000532249 SLC39A7Q92504 469 aa7.38□□□□□ -1.23
SOX9-AS1-209ENST00000532249 NBPF4Q96M43 638 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms