RNA–Protein interactions for RNA: ENST00000532014.1

TRIM53AP-201, Transcript of tripartite motif containing 53A, pseudogene, humanhuman

BASIC

Gene TRIM53AP, Length 1,544 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53AP-201ENST00000532014 SULT6B1Q6IMI4 303 aa12.45□□□□□ -0.42
TRIM53AP-201ENST00000532014 BARGINQ6ZT62 677 aa12.45□□□□□ -0.42
TRIM53AP-201ENST00000532014 THRAP3Q9Y2W1 955 aaKnown RBP12.45□□□□□ -0.42
TRIM53AP-201ENST00000532014 CCDC9Q9Y3X0 531 aaKnown RBP12.45□□□□□ -0.42
TRIM53AP-201ENST00000532014 OVOS2A0A0G2JMS6 1433 aa12.45□□□□□ -0.42
TRIM53AP-201ENST00000532014 U2SURPO15042 1029 aaKnown RBP12.44□□□□□ -0.42
TRIM53AP-201ENST00000532014 RBM6P78332 1123 aaKnown RBP12.44□□□□□ -0.42
TRIM53AP-201ENST00000532014 PNISRQ8TF01 805 aaKnown RBP12.44□□□□□ -0.42
TRIM53AP-201ENST00000532014 RSPH6AQ9H0K4 717 aa12.44□□□□□ -0.42
TRIM53AP-201ENST00000532014 VIRMAQ69YN4 1812 aaKnown RBP12.44□□□□□ -0.42
TRIM53AP-201ENST00000532014 MRS2Q9HD23 443 aa12.43□□□□□ -0.42
TRIM53AP-201ENST00000532014 DLG5Q8TDM6 1919 aa12.43□□□□□ -0.42
TRIM53AP-201ENST00000532014 TNS2Q63HR2 1409 aa12.42□□□□□ -0.42
TRIM53AP-201ENST00000532014 CCER2I3L3R5 266 aa12.42□□□□□ -0.42
TRIM53AP-201ENST00000532014 U2AF1L5P0DN76 240 aaPredicted RBP12.42□□□□□ -0.42
TRIM53AP-201ENST00000532014 IL2RBP14784 551 aa12.42□□□□□ -0.42
TRIM53AP-201ENST00000532014 RXRBP28702 533 aa12.42□□□□□ -0.42
TRIM53AP-201ENST00000532014 U2AF1Q01081 240 aaKnown RBP eCLIP12.42□□□□□ -0.42
TRIM53AP-201ENST00000532014 PLEKHF1Q96S99 279 aa12.42□□□□□ -0.42
TRIM53AP-201ENST00000532014 ADAMTS8Q9UP79 889 aa12.42□□□□□ -0.42
TRIM53AP-201ENST00000532014 TOGARAM1Q9Y4F4 1720 aa12.41□□□□□ -0.42
TRIM53AP-201ENST00000532014 PHACTR3Q96KR7 559 aa12.41□□□□□ -0.42
TRIM53AP-201ENST00000532014 SEPT12Q8IYM1 358 aa12.4□□□□□ -0.42
TRIM53AP-201ENST00000532014 NUDCQ9Y266 331 aa12.4□□□□□ -0.42
TRIM53AP-201ENST00000532014 PLEKHG2Q9H7P9 1386 aa12.4□□□□□ -0.42
TRIM53AP-201ENST00000532014 FCHSD2O94868 740 aa12.39□□□□□ -0.43
TRIM53AP-201ENST00000532014 PRKAR2BP31323 418 aa12.39□□□□□ -0.43
TRIM53AP-201ENST00000532014 SBF2Q86WG5 1849 aa12.39□□□□□ -0.43
TRIM53AP-201ENST00000532014 ADAMTS7Q9UKP4 1686 aa12.38□□□□□ -0.43
TRIM53AP-201ENST00000532014 RAPGEF4Q8WZA2 1011 aa12.38□□□□□ -0.43
TRIM53AP-201ENST00000532014 CYP27B1O15528 508 aa12.37□□□□□ -0.43
TRIM53AP-201ENST00000532014 TATP17735 454 aaPredicted RBP12.37□□□□□ -0.43
TRIM53AP-201ENST00000532014 CDCA7Q9BWT1 371 aaPredicted RBP12.37□□□□□ -0.43
TRIM53AP-201ENST00000532014 DOT1LQ8TEK3 1739 aa12.37□□□□□ -0.43
TRIM53AP-201ENST00000532014 SCN11AQ9UI33 1791 aa12.37□□□□□ -0.43
TRIM53AP-201ENST00000532014 CAPN15O75808 1086 aa12.37□□□□□ -0.43
TRIM53AP-201ENST00000532014 WDR43Q15061 677 aaKnown RBP eCLIP12.37□□□□□ -0.43
TRIM53AP-201ENST00000532014 DDB1Q16531 1140 aa12.37□□□□□ -0.43
TRIM53AP-201ENST00000532014 MTHFSDQ2M296 383 aaKnown RBP12.37□□□□□ -0.43
TRIM53AP-201ENST00000532014 CCDC146Q8IYE0 955 aa12.37□□□□□ -0.43
TRIM53AP-201ENST00000532014 MARCH10Q8NA82 808 aaPredicted RBP12.37□□□□□ -0.43
TRIM53AP-201ENST00000532014 FAM182BQ5T319 152 aa12.36□□□□□ -0.43
TRIM53AP-201ENST00000532014 ZCRB1Q8TBF4 217 aaKnown RBP12.36□□□□□ -0.43
TRIM53AP-201ENST00000532014 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.36□□□□□ -0.43
TRIM53AP-201ENST00000532014 ITGB4P16144 1822 aa12.35□□□□□ -0.43
TRIM53AP-201ENST00000532014 FAM9BQ8IZU0 186 aa12.35□□□□□ -0.43
TRIM53AP-201ENST00000532014 KDM6AO15550 1401 aaPredicted RBP12.34□□□□□ -0.43
TRIM53AP-201ENST00000532014 SIPA1L3O60292 1781 aaPredicted RBP12.34□□□□□ -0.43
TRIM53AP-201ENST00000532014 A0A0G2JS52 829 aa12.34□□□□□ -0.43
TRIM53AP-201ENST00000532014 EXOC5O00471 708 aa12.34□□□□□ -0.43
TRIM53AP-201ENST00000532014 MYT1Q01538 1121 aa12.34□□□□□ -0.43
TRIM53AP-201ENST00000532014 ILDR2Q71H61 639 aa12.34□□□□□ -0.43
TRIM53AP-201ENST00000532014 SP7Q8TDD2 431 aaPredicted RBP12.34□□□□□ -0.43
TRIM53AP-201ENST00000532014 PCDH11XQ9BZA7 1347 aa12.33□□□□□ -0.44
TRIM53AP-201ENST00000532014 PCDH11YQ9BZA8 1340 aa12.33□□□□□ -0.44
TRIM53AP-201ENST00000532014 PHKG2P15735 406 aa12.33□□□□□ -0.44
TRIM53AP-201ENST00000532014 DDX54Q8TDD1 881 aaKnown RBP12.33□□□□□ -0.44
TRIM53AP-201ENST00000532014 NHSQ6T4R5 1651 aa12.33□□□□□ -0.44
TRIM53AP-201ENST00000532014 SENP3-EIF4A1A0A087X0R7 540 aa12.32□□□□□ -0.44
TRIM53AP-201ENST00000532014 AMOTQ4VCS5 1084 aa12.32□□□□□ -0.44
TRIM53AP-201ENST00000532014 PLEKHO1Q53GL0 409 aaPredicted RBP12.32□□□□□ -0.44
TRIM53AP-201ENST00000532014 KRT27Q7Z3Y8 459 aa12.32□□□□□ -0.44
TRIM53AP-201ENST00000532014 RUNDC1Q96C34 613 aa12.32□□□□□ -0.44
TRIM53AP-201ENST00000532014 BCL9O00512 1426 aa12.32□□□□□ -0.44
TRIM53AP-201ENST00000532014 TNS1Q9HBL0 1735 aaKnown RBP12.32□□□□□ -0.44
TRIM53AP-201ENST00000532014 NKX1-1Q15270 411 aaPredicted RBP12.32□□□□□ -0.44
TRIM53AP-201ENST00000532014 ZNF530Q6P9A1 599 aaPredicted RBP12.32□□□□□ -0.44
TRIM53AP-201ENST00000532014 SPG7Q9UQ90 795 aa12.32□□□□□ -0.44
TRIM53AP-201ENST00000532014 PDE3BQ13370 1112 aa12.31□□□□□ -0.44
TRIM53AP-201ENST00000532014 PTF1AQ7RTS3 328 aa12.31□□□□□ -0.44
TRIM53AP-201ENST00000532014 SPINK5Q9NQ38 1064 aaPredicted RBP12.31□□□□□ -0.44
TRIM53AP-201ENST00000532014 KAT6BQ8WYB5 2073 aa12.3□□□□□ -0.44
TRIM53AP-201ENST00000532014 BTAF1O14981 1849 aa12.3□□□□□ -0.44
TRIM53AP-201ENST00000532014 MRC1P22897 1456 aa12.3□□□□□ -0.44
TRIM53AP-201ENST00000532014 APAF1O14727 1248 aa12.3□□□□□ -0.44
TRIM53AP-201ENST00000532014 TMPOP42166 694 aaKnown RBP12.3□□□□□ -0.44
TRIM53AP-201ENST00000532014 NFE2L2Q16236 605 aa12.3□□□□□ -0.44
TRIM53AP-201ENST00000532014 IFNL2Q8IZJ0 200 aa12.3□□□□□ -0.44
TRIM53AP-201ENST00000532014 LGR6Q9HBX8 967 aa12.3□□□□□ -0.44
TRIM53AP-201ENST00000532014 RRP7AQ9Y3A4 280 aaKnown RBP12.3□□□□□ -0.44
TRIM53AP-201ENST00000532014 MAP3K5Q99683 1374 aa12.3□□□□□ -0.44
TRIM53AP-201ENST00000532014 AKAP4Q5JQC9 854 aa12.29□□□□□ -0.44
TRIM53AP-201ENST00000532014 MPRIPQ6WCQ1 1025 aa12.29□□□□□ -0.44
TRIM53AP-201ENST00000532014 GAS2L2Q8NHY3 880 aa12.29□□□□□ -0.44
TRIM53AP-201ENST00000532014 TRIM35Q9UPQ4 493 aa12.29□□□□□ -0.44
TRIM53AP-201ENST00000532014 CEMIPQ8WUJ3 1361 aa12.29□□□□□ -0.44
TRIM53AP-201ENST00000532014 PAPPAQ13219 1627 aa12.29□□□□□ -0.44
TRIM53AP-201ENST00000532014 MAPK8IP3Q9UPT6 1336 aa12.29□□□□□ -0.44
TRIM53AP-201ENST00000532014 SRCAPQ6ZRS2 3230 aa12.28□□□□□ -0.44
TRIM53AP-201ENST00000532014 DCTN1Q14203 1278 aa12.28□□□□□ -0.44
TRIM53AP-201ENST00000532014 IL17REQ8NFR9 667 aa12.28□□□□□ -0.44
TRIM53AP-201ENST00000532014 GNAT3A8MTJ3 354 aa12.27□□□□□ -0.44
TRIM53AP-201ENST00000532014 KCNQ2O43526 872 aa12.27□□□□□ -0.44
TRIM53AP-201ENST00000532014 PNNQ9H307 717 aaKnown RBP12.27□□□□□ -0.44
TRIM53AP-201ENST00000532014 RIPK4P57078 832 aa12.27□□□□□ -0.45
TRIM53AP-201ENST00000532014 NEUROD2Q15784 382 aa12.27□□□□□ -0.45
TRIM53AP-201ENST00000532014 C1orf141Q5JVX7 400 aa12.27□□□□□ -0.45
TRIM53AP-201ENST00000532014 MCM10Q7L590 875 aa12.27□□□□□ -0.45
TRIM53AP-201ENST00000532014 ACSBG1Q96GR2 724 aa12.27□□□□□ -0.45
TRIM53AP-201ENST00000532014 THUMPD2Q9BTF0 503 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms