RNA–Protein interactions for RNA: ENST00000528729.1

FDFT1-213, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 3

Gene FDFT1, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-213ENST00000528729 RHBDL3P58872 404 aa9.52□□□□□ -0.89
FDFT1-213ENST00000528729 FKBP4Q02790 459 aaKnown RBP eCLIP9.52□□□□□ -0.89
FDFT1-213ENST00000528729 FMR1Q06787 632 aaKnown RBP eCLIP9.52□□□□□ -0.89
FDFT1-213ENST00000528729 ZFYVE27Q5T4F4 411 aa9.52□□□□□ -0.89
FDFT1-213ENST00000528729 TYW1BQ6NUM6 668 aa9.52□□□□□ -0.89
FDFT1-213ENST00000528729 FAM174AQ8TBP5 190 aa9.52□□□□□ -0.89
FDFT1-213ENST00000528729 STAG1Q8WVM7 1258 aa9.52□□□□□ -0.89
FDFT1-213ENST00000528729 GEMIN8Q9NWZ8 242 aaKnown RBP9.52□□□□□ -0.89
FDFT1-213ENST00000528729 PARP2Q9UGN5 583 aa9.52□□□□□ -0.89
FDFT1-213ENST00000528729 DDX11L8A8MPP1 907 aa9.51□□□□□ -0.89
FDFT1-213ENST00000528729 PRPF40AO75400 957 aaKnown RBP9.51□□□□□ -0.89
FDFT1-213ENST00000528729 PAX3P23760 479 aa9.51□□□□□ -0.89
FDFT1-213ENST00000528729 USP46P62068 366 aa9.51□□□□□ -0.89
FDFT1-213ENST00000528729 NCOA4Q13772 614 aa9.51□□□□□ -0.89
FDFT1-213ENST00000528729 OCLNQ16625 522 aa9.51□□□□□ -0.89
FDFT1-213ENST00000528729 PPARGC1BQ86YN6 1023 aaKnown RBP9.51□□□□□ -0.89
FDFT1-213ENST00000528729 TMEM121BQ9BXQ6 578 aaPredicted RBP9.51□□□□□ -0.89
FDFT1-213ENST00000528729 RBCK1Q9BYM8 510 aa9.51□□□□□ -0.89
FDFT1-213ENST00000528729 TMX1Q9H3N1 280 aa9.51□□□□□ -0.89
FDFT1-213ENST00000528729 PRR12Q9ULL5 1215 aa9.51□□□□□ -0.89
FDFT1-213ENST00000528729 INPP5FQ9Y2H2 1132 aa9.51□□□□□ -0.89
FDFT1-213ENST00000528729 PRKAB1Q9Y478 270 aa9.51□□□□□ -0.89
FDFT1-213ENST00000528729 PCDHGA10Q9Y5H3 936 aa9.51□□□□□ -0.89
FDFT1-213ENST00000528729 RCCD1A6NED2 376 aa9.5□□□□□ -0.89
FDFT1-213ENST00000528729 PRMT3O60678 531 aa9.5□□□□□ -0.89
FDFT1-213ENST00000528729 FMNL1O95466 1100 aaPredicted RBP9.5□□□□□ -0.89
FDFT1-213ENST00000528729 BIRC2Q13490 618 aa9.5□□□□□ -0.89
FDFT1-213ENST00000528729 NR6A1Q15406 480 aa9.5□□□□□ -0.89
FDFT1-213ENST00000528729 GTF3C2Q8WUA4 911 aaPredicted RBP9.5□□□□□ -0.89
FDFT1-213ENST00000528729 TSC1Q92574 1164 aa9.5□□□□□ -0.89
FDFT1-213ENST00000528729 FAM161BQ96MY7 647 aa9.5□□□□□ -0.89
FDFT1-213ENST00000528729 NAP1L5Q96NT1 182 aaPredicted RBP9.5□□□□□ -0.89
FDFT1-213ENST00000528729 CFTRP13569 1480 aa9.49□□□□□ -0.89
FDFT1-213ENST00000528729 MRC2Q9UBG0 1479 aa9.49□□□□□ -0.89
FDFT1-213ENST00000528729 PRC1O43663 620 aa9.49□□□□□ -0.89
FDFT1-213ENST00000528729 MTMR2Q13614 643 aa9.49□□□□□ -0.89
FDFT1-213ENST00000528729 TMC7Q7Z402 723 aa9.49□□□□□ -0.89
FDFT1-213ENST00000528729 FMNL3Q8IVF7 1028 aa9.49□□□□□ -0.89
FDFT1-213ENST00000528729 PNISRQ8TF01 805 aaKnown RBP9.49□□□□□ -0.89
FDFT1-213ENST00000528729 PCGF6Q9BYE7 350 aa9.49□□□□□ -0.89
FDFT1-213ENST00000528729 TYW1Q9NV66 732 aaKnown RBP9.49□□□□□ -0.89
FDFT1-213ENST00000528729 VTI1BQ9UEU0 232 aa9.49□□□□□ -0.89
FDFT1-213ENST00000528729 TREHO43280 583 aa9.48□□□□□ -0.89
FDFT1-213ENST00000528729 DAB2P98082 770 aa9.48□□□□□ -0.89
FDFT1-213ENST00000528729 PDE3BQ13370 1112 aa9.48□□□□□ -0.89
FDFT1-213ENST00000528729 MCF2L2Q86YR7 1114 aa9.48□□□□□ -0.89
FDFT1-213ENST00000528729 RPS6KC1Q96S38 1066 aa9.48□□□□□ -0.89
FDFT1-213ENST00000528729 PCDHGC3Q9UN70 934 aa9.48□□□□□ -0.89
FDFT1-213ENST00000528729 DNMT3AQ9Y6K1 912 aaPredicted RBP9.48□□□□□ -0.89
FDFT1-213ENST00000528729 PPP1R12AO14974 1030 aaPredicted RBP9.47□□□□□ -0.89
FDFT1-213ENST00000528729 LDHBP07195 334 aaKnown RBP9.47□□□□□ -0.89
FDFT1-213ENST00000528729 CLEC4GQ6UXB4 293 aa9.47□□□□□ -0.89
FDFT1-213ENST00000528729 VPS37DQ86XT2 251 aa9.47□□□□□ -0.89
FDFT1-213ENST00000528729 OGFOD1Q8N543 542 aa9.47□□□□□ -0.89
FDFT1-213ENST00000528729 PTCD2Q8WV60 388 aaKnown RBP9.47□□□□□ -0.89
FDFT1-213ENST00000528729 DUSP9Q99956 384 aaKnown RBP9.47□□□□□ -0.89
FDFT1-213ENST00000528729 PNMA2Q9UL42 364 aa9.47□□□□□ -0.89
FDFT1-213ENST00000528729 THOC2Q8NI27 1593 aaKnown RBP9.46□□□□□ -0.89
FDFT1-213ENST00000528729 CFAP99D6REC4 459 aa9.46□□□□□ -0.9
FDFT1-213ENST00000528729 K7ELQ4 463 aaPredicted RBP9.46□□□□□ -0.9
FDFT1-213ENST00000528729 PDGFRBP09619 1106 aa9.46□□□□□ -0.9
FDFT1-213ENST00000528729 FGRP09769 529 aa9.46□□□□□ -0.9
FDFT1-213ENST00000528729 FBXO45P0C2W1 286 aa9.46□□□□□ -0.9
FDFT1-213ENST00000528729 PLEKHG4Q58EX7 1191 aa9.46□□□□□ -0.9
FDFT1-213ENST00000528729 JDP2Q8WYK2 163 aa9.46□□□□□ -0.9
FDFT1-213ENST00000528729 FRMD6Q96NE9 622 aa9.46□□□□□ -0.9
FDFT1-213ENST00000528729 FANCD2Q9BXW9 1451 aa9.46□□□□□ -0.9
FDFT1-213ENST00000528729 CEP164Q9UPV0 1460 aa9.46□□□□□ -0.9
FDFT1-213ENST00000528729 FOXD4Q12950 439 aaPredicted RBP9.45□□□□□ -0.9
FDFT1-213ENST00000528729 PSMD2Q13200 908 aa9.45□□□□□ -0.9
FDFT1-213ENST00000528729 SLFNL1Q499Z3 407 aa9.45□□□□□ -0.9
FDFT1-213ENST00000528729 ZNF654Q8IZM8 581 aa9.45□□□□□ -0.9
FDFT1-213ENST00000528729 BSDC1Q9NW68 430 aaPredicted RBP9.45□□□□□ -0.9
FDFT1-213ENST00000528729 WIZO95785 1651 aa9.45□□□□□ -0.9
FDFT1-213ENST00000528729 ZBBXA8MT70 800 aa9.44□□□□□ -0.9
FDFT1-213ENST00000528729 NBPF6Q5VWK0 638 aa9.44□□□□□ -0.9
FDFT1-213ENST00000528729 MKL1Q969V6 931 aa9.44□□□□□ -0.9
FDFT1-213ENST00000528729 ZNF594Q96JF6 807 aaPredicted RBP9.44□□□□□ -0.9
FDFT1-213ENST00000528729 C8orf48Q96LL4 319 aa9.44□□□□□ -0.9
FDFT1-213ENST00000528729 PRIMPOLQ96LW4 560 aa9.44□□□□□ -0.9
FDFT1-213ENST00000528729 NBPF4Q96M43 638 aa9.44□□□□□ -0.9
FDFT1-213ENST00000528729 GNL3LQ9NVN8 582 aaKnown RBP9.44□□□□□ -0.9
FDFT1-213ENST00000528729 DDX41Q9UJV9 622 aaKnown RBP9.44□□□□□ -0.9
FDFT1-213ENST00000528729 ATP1A2P50993 1020 aa9.43□□□□□ -0.9
FDFT1-213ENST00000528729 AMPD3Q01432 767 aa9.43□□□□□ -0.9
FDFT1-213ENST00000528729 C11orf96Q7Z7L8 435 aa9.43□□□□□ -0.9
FDFT1-213ENST00000528729 TRIM50Q86XT4 487 aa9.43□□□□□ -0.9
FDFT1-213ENST00000528729 PRKD2Q9BZL6 878 aa9.43□□□□□ -0.9
FDFT1-213ENST00000528729 SEPT3Q9UH03 358 aa9.43□□□□□ -0.9
FDFT1-213ENST00000528729 WDR62O43379 1518 aa9.42□□□□□ -0.9
FDFT1-213ENST00000528729 CLDN10P78369 228 aa9.42□□□□□ -0.9
FDFT1-213ENST00000528729 SERINC3Q13530 473 aa9.42□□□□□ -0.9
FDFT1-213ENST00000528729 MTMR3Q13615 1198 aa9.42□□□□□ -0.9
FDFT1-213ENST00000528729 KRBA2Q6ZNG9 492 aa9.42□□□□□ -0.9
FDFT1-213ENST00000528729 PKNOX2Q96KN3 472 aa9.42□□□□□ -0.9
FDFT1-213ENST00000528729 EYA1Q99502 592 aa9.42□□□□□ -0.9
FDFT1-213ENST00000528729 DNAAF2Q9NVR5 837 aaKnown RBP9.42□□□□□ -0.9
FDFT1-213ENST00000528729 BOLA1Q9Y3E2 137 aa9.42□□□□□ -0.9
FDFT1-213ENST00000528729 COMMD10Q9Y6G5 202 aa9.42□□□□□ -0.9
FDFT1-213ENST00000528729 DKK1O94907 266 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms