RNA–Protein interactions for RNA: ENST00000527868.1

IFT46-204, Transcript of intraflagellar transport 46, humanhuman

TSL 3

Gene IFT46, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46-204ENST00000527868 LTV1Q96GA3 475 aaPredicted RBP12.26□□□□□ -0.45
IFT46-204ENST00000527868 NCAPD2Q15021 1401 aa12.26□□□□□ -0.45
IFT46-204ENST00000527868 TNS2Q63HR2 1409 aa12.26□□□□□ -0.45
IFT46-204ENST00000527868 PPM1GO15355 546 aaPredicted RBP12.25□□□□□ -0.45
IFT46-204ENST00000527868 IL2RBP14784 551 aa12.24□□□□□ -0.45
IFT46-204ENST00000527868 NBPF6Q5VWK0 638 aa12.24□□□□□ -0.45
IFT46-204ENST00000527868 UPF1Q92900 1129 aaKnown RBP eCLIP12.24□□□□□ -0.45
IFT46-204ENST00000527868 NBPF4Q96M43 638 aa12.24□□□□□ -0.45
IFT46-204ENST00000527868 DDB1Q16531 1140 aa12.23□□□□□ -0.45
IFT46-204ENST00000527868 MEGF6O75095 1541 aa12.22□□□□□ -0.45
IFT46-204ENST00000527868 PDE3BQ13370 1112 aa12.22□□□□□ -0.45
IFT46-204ENST00000527868 EIF4A2Q14240 407 aaKnown RBP12.22□□□□□ -0.45
IFT46-204ENST00000527868 OVOS2A0A0G2JMS6 1433 aa12.21□□□□□ -0.45
IFT46-204ENST00000527868 BCL9O00512 1426 aa12.21□□□□□ -0.45
IFT46-204ENST00000527868 PARD3Q8TEW0 1356 aa12.21□□□□□ -0.45
IFT46-204ENST00000527868 MTHFSP49914 203 aa12.21□□□□□ -0.45
IFT46-204ENST00000527868 DDX10Q13206 875 aaKnown RBP12.21□□□□□ -0.45
IFT46-204ENST00000527868 COL3A1P02461 1466 aaPredicted RBP12.21□□□□□ -0.46
IFT46-204ENST00000527868 RGPD1P0DJD0 1748 aa12.2□□□□□ -0.46
IFT46-204ENST00000527868 PLEKHG2Q9H7P9 1386 aa12.2□□□□□ -0.46
IFT46-204ENST00000527868 IGSF1Q8N6C5 1336 aa12.2□□□□□ -0.46
IFT46-204ENST00000527868 EXOC5O00471 708 aa12.2□□□□□ -0.46
IFT46-204ENST00000527868 FAM196AQ6ZSG2 479 aa12.2□□□□□ -0.46
IFT46-204ENST00000527868 USHBP1Q8N6Y0 703 aa12.2□□□□□ -0.46
IFT46-204ENST00000527868 EYA1Q99502 592 aa12.2□□□□□ -0.46
IFT46-204ENST00000527868 SHANK3Q9BYB0 1731 aa12.2□□□□□ -0.46
IFT46-204ENST00000527868 ZNF316A6NFI3 1004 aaPredicted RBP12.19□□□□□ -0.46
IFT46-204ENST00000527868 FAM182BQ5T319 152 aa12.19□□□□□ -0.46
IFT46-204ENST00000527868 CCDC125Q86Z20 511 aa12.19□□□□□ -0.46
IFT46-204ENST00000527868 PKD1L3Q7Z443 1732 aa12.19□□□□□ -0.46
IFT46-204ENST00000527868 TNS1Q9HBL0 1735 aaKnown RBP12.18□□□□□ -0.46
IFT46-204ENST00000527868 IL13P35225 146 aa12.18□□□□□ -0.46
IFT46-204ENST00000527868 CNGB1Q14028 1251 aaPredicted RBP12.18□□□□□ -0.46
IFT46-204ENST00000527868 MARCH10Q8NA82 808 aaPredicted RBP12.18□□□□□ -0.46
IFT46-204ENST00000527868 RAPGEF4Q8WZA2 1011 aa12.18□□□□□ -0.46
IFT46-204ENST00000527868 SBF2Q86WG5 1849 aa12.17□□□□□ -0.46
IFT46-204ENST00000527868 TATP17735 454 aaPredicted RBP12.17□□□□□ -0.46
IFT46-204ENST00000527868 PPP2R1AP30153 589 aa12.17□□□□□ -0.46
IFT46-204ENST00000527868 KDRP35968 1356 aa12.17□□□□□ -0.46
IFT46-204ENST00000527868 ZCRB1Q8TBF4 217 aaKnown RBP12.16□□□□□ -0.46
IFT46-204ENST00000527868 DIAPH1O60610 1272 aaKnown RBP12.15□□□□□ -0.46
IFT46-204ENST00000527868 RALBP1Q15311 655 aa12.15□□□□□ -0.46
IFT46-204ENST00000527868 NHSQ6T4R5 1651 aa12.15□□□□□ -0.46
IFT46-204ENST00000527868 VASPP50552 380 aaPredicted RBP12.14□□□□□ -0.47
IFT46-204ENST00000527868 CFAP53Q96M91 514 aa12.14□□□□□ -0.47
IFT46-204ENST00000527868 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.14□□□□□ -0.47
IFT46-204ENST00000527868 PCDH11XQ9BZA7 1347 aa12.13□□□□□ -0.47
IFT46-204ENST00000527868 PCDH11YQ9BZA8 1340 aa12.13□□□□□ -0.47
IFT46-204ENST00000527868 TRIM37O94972 964 aa12.13□□□□□ -0.47
IFT46-204ENST00000527868 SF3B2Q13435 895 aaKnown RBP12.13□□□□□ -0.47
IFT46-204ENST00000527868 SULT6B1Q6IMI4 303 aa12.12□□□□□ -0.47
IFT46-204ENST00000527868 AEBP1Q8IUX7 1158 aa12.12□□□□□ -0.47
IFT46-204ENST00000527868 RGPD3A6NKT7 1758 aaPredicted RBP12.12□□□□□ -0.47
IFT46-204ENST00000527868 RGPD4Q7Z3J3 1758 aa12.12□□□□□ -0.47
IFT46-204ENST00000527868 DOT1LQ8TEK3 1739 aa12.11□□□□□ -0.47
IFT46-204ENST00000527868 CYP27B1O15528 508 aa12.11□□□□□ -0.47
IFT46-204ENST00000527868 BAG6P46379 1132 aa12.11□□□□□ -0.47
IFT46-204ENST00000527868 DDX54Q8TDD1 881 aaKnown RBP12.11□□□□□ -0.47
IFT46-204ENST00000527868 BCL11BQ9C0K0 894 aaPredicted RBP12.11□□□□□ -0.47
IFT46-204ENST00000527868 SPG7Q9UQ90 795 aa12.11□□□□□ -0.47
IFT46-204ENST00000527868 MYBBP1AQ9BQG0 1328 aaKnown RBP12.11□□□□□ -0.47
IFT46-204ENST00000527868 PRKRIP1Q9H875 184 aaPredicted RBP12.1□□□□□ -0.47
IFT46-204ENST00000527868 TOGARAM1Q9Y4F4 1720 aa12.09□□□□□ -0.47
IFT46-204ENST00000527868 NKX1-1Q15270 411 aaPredicted RBP12.09□□□□□ -0.47
IFT46-204ENST00000527868 AMOTQ4VCS5 1084 aa12.09□□□□□ -0.47
IFT46-204ENST00000527868 DEFB132Q7Z7B7 95 aa12.09□□□□□ -0.47
IFT46-204ENST00000527868 NUDCQ9Y266 331 aa12.09□□□□□ -0.47
IFT46-204ENST00000527868 RREB1Q92766 1687 aa12.08□□□□□ -0.48
IFT46-204ENST00000527868 U2SURPO15042 1029 aaKnown RBP12.08□□□□□ -0.48
IFT46-204ENST00000527868 APBA3O96018 575 aa12.08□□□□□ -0.48
IFT46-204ENST00000527868 HMOX1P09601 288 aa12.08□□□□□ -0.48
IFT46-204ENST00000527868 PHKG2P15735 406 aa12.08□□□□□ -0.48
IFT46-204ENST00000527868 CACNB1Q02641 598 aaPredicted RBP12.08□□□□□ -0.48
IFT46-204ENST00000527868 PLEKHO1Q53GL0 409 aaPredicted RBP12.08□□□□□ -0.48
IFT46-204ENST00000527868 IFNL2Q8IZJ0 200 aa12.08□□□□□ -0.48
IFT46-204ENST00000527868 BTAF1O14981 1849 aa12.08□□□□□ -0.48
IFT46-204ENST00000527868 SPDYE2BA6NHP3 402 aa12.07□□□□□ -0.48
IFT46-204ENST00000527868 KCNQ2O43526 872 aa12.07□□□□□ -0.48
IFT46-204ENST00000527868 SPDYE6P0CI01 402 aa12.07□□□□□ -0.48
IFT46-204ENST00000527868 EN1Q05925 392 aaPredicted RBP12.07□□□□□ -0.48
IFT46-204ENST00000527868 SPDYE2Q495Y8 402 aa12.07□□□□□ -0.48
IFT46-204ENST00000527868 PTF1AQ7RTS3 328 aa12.07□□□□□ -0.48
IFT46-204ENST00000527868 ACSBG1Q96GR2 724 aa12.07□□□□□ -0.48
IFT46-204ENST00000527868 CAMKK2Q96RR4 588 aa12.07□□□□□ -0.48
IFT46-204ENST00000527868 PLSCR1O15162 318 aa12.06□□□□□ -0.48
IFT46-204ENST00000527868 RSPH6AQ9H0K4 717 aa12.06□□□□□ -0.48
IFT46-204ENST00000527868 HSP90AB1P08238 724 aaKnown RBP12.05□□□□□ -0.48
IFT46-204ENST00000527868 ZNF530Q6P9A1 599 aaPredicted RBP12.05□□□□□ -0.48
IFT46-204ENST00000527868 KAT6BQ8WYB5 2073 aa12.05□□□□□ -0.48
IFT46-204ENST00000527868 ITGB4P16144 1822 aa12.04□□□□□ -0.48
IFT46-204ENST00000527868 KDM6AO15550 1401 aaPredicted RBP12.04□□□□□ -0.48
IFT46-204ENST00000527868 NUP188Q5SRE5 1749 aa12.04□□□□□ -0.48
IFT46-204ENST00000527868 FCHSD2O94868 740 aa12.04□□□□□ -0.48
IFT46-204ENST00000527868 U2AF1L5P0DN76 240 aaPredicted RBP12.04□□□□□ -0.48
IFT46-204ENST00000527868 PRIM1P49642 420 aaKnown RBP12.04□□□□□ -0.48
IFT46-204ENST00000527868 U2AF1Q01081 240 aaKnown RBP eCLIP12.04□□□□□ -0.48
IFT46-204ENST00000527868 EZH2Q15910 746 aaKnown RBP12.04□□□□□ -0.48
IFT46-204ENST00000527868 ADAMTS7Q9UKP4 1686 aa12.03□□□□□ -0.48
IFT46-204ENST00000527868 PRKAR2BP31323 418 aa12.03□□□□□ -0.48
IFT46-204ENST00000527868 AKAP4Q5JQC9 854 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms