RNA–Protein interactions for RNA: ENST00000526457.3

LRRK1-205, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 11,632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-205ENST00000526457 ERC1Q8IUD2 1116 aa9.01□□□□□ -0.97
LRRK1-205ENST00000526457 FEZ1Q99689 392 aa9.01□□□□□ -0.97
LRRK1-205ENST00000526457 CTTNBP2Q8WZ74 1663 aa9.01□□□□□ -0.97
LRRK1-205ENST00000526457 CTDP1Q9Y5B0 961 aaPredicted RBP9.01□□□□□ -0.97
LRRK1-205ENST00000526457 GOLGA6L9A6NEM1 432 aa9□□□□□ -0.97
LRRK1-205ENST00000526457 SMTNL1A8MU46 457 aa9□□□□□ -0.97
LRRK1-205ENST00000526457 HSP90AB4PQ58FF6 505 aa9□□□□□ -0.97
LRRK1-205ENST00000526457 DZIP1Q86YF9 867 aaKnown RBP9□□□□□ -0.97
LRRK1-205ENST00000526457 LRRC9Q6ZRR7 1453 aa9□□□□□ -0.97
LRRK1-205ENST00000526457 ANKRD18BA2A2Z9 1011 aa9□□□□□ -0.97
LRRK1-205ENST00000526457 MAATS1Q7Z4T9 603 aa9□□□□□ -0.97
LRRK1-205ENST00000526457 CCDC121Q6ZUS5 278 aa9□□□□□ -0.97
LRRK1-205ENST00000526457 ELL2O00472 640 aaPredicted RBP9□□□□□ -0.97
LRRK1-205ENST00000526457 KDM4AO75164 1064 aa9□□□□□ -0.97
LRRK1-205ENST00000526457 ANKS4BQ8N8V4 417 aa9□□□□□ -0.97
LRRK1-205ENST00000526457 G3BP1Q13283 466 aaKnown RBP eCLIP9□□□□□ -0.97
LRRK1-205ENST00000526457 LRCH2Q5VUJ6 765 aa9□□□□□ -0.97
LRRK1-205ENST00000526457 TRMT1Q9NXH9 659 aaKnown RBP9□□□□□ -0.97
LRRK1-205ENST00000526457 TIAM1Q13009 1591 aa9□□□□□ -0.97
LRRK1-205ENST00000526457 GSTTP1A0A1W2PQM5 241 aa9□□□□□ -0.97
LRRK1-205ENST00000526457 NOL3O60936 208 aaKnown RBP9□□□□□ -0.97
LRRK1-205ENST00000526457 DDX46Q7L014 1031 aaKnown RBP9□□□□□ -0.97
LRRK1-205ENST00000526457 SPECC1Q5M775 1068 aa8.99□□□□□ -0.97
LRRK1-205ENST00000526457 FYB1O15117 783 aa8.99□□□□□ -0.97
LRRK1-205ENST00000526457 CNTROBQ8N137 903 aa8.99□□□□□ -0.97
LRRK1-205ENST00000526457 OTUD6BQ8N6M0 293 aa8.99□□□□□ -0.97
LRRK1-205ENST00000526457 TCHPQ9BT92 498 aa8.99□□□□□ -0.97
LRRK1-205ENST00000526457 MAP3K1Q13233 1512 aa8.99□□□□□ -0.97
LRRK1-205ENST00000526457 GOLIM4O00461 696 aa8.99□□□□□ -0.97
LRRK1-205ENST00000526457 API5Q9BZZ5 524 aaKnown RBP8.99□□□□□ -0.97
LRRK1-205ENST00000526457 ARFGAP3Q9NP61 516 aa8.99□□□□□ -0.97
LRRK1-205ENST00000526457 CCDC183Q5T5S1 534 aa8.99□□□□□ -0.97
LRRK1-205ENST00000526457 CEP135Q66GS9 1140 aa8.99□□□□□ -0.97
LRRK1-205ENST00000526457 KRT18P05783 430 aaKnown RBP8.99□□□□□ -0.97
LRRK1-205ENST00000526457 DRC1Q96MC2 740 aa8.99□□□□□ -0.97
LRRK1-205ENST00000526457 TANGO6Q9C0B7 1094 aa8.99□□□□□ -0.97
LRRK1-205ENST00000526457 CLIP2Q9UDT6 1046 aa8.99□□□□□ -0.97
LRRK1-205ENST00000526457 HMGB1P1B2RPK0 211 aaPredicted RBP8.99□□□□□ -0.97
LRRK1-205ENST00000526457 CSB-PGBD3P0DP91 1061 aa8.99□□□□□ -0.97
LRRK1-205ENST00000526457 SPA17Q15506 151 aa8.99□□□□□ -0.97
LRRK1-205ENST00000526457 PAXBP1Q9Y5B6 917 aa8.99□□□□□ -0.97
LRRK1-205ENST00000526457 NSRP1Q9H0G5 558 aaKnown RBP8.99□□□□□ -0.97
LRRK1-205ENST00000526457 CAPN2P17655 700 aa8.98□□□□□ -0.97
LRRK1-205ENST00000526457 EBAG9O00559 213 aa8.98□□□□□ -0.97
LRRK1-205ENST00000526457 EIF5P55010 431 aaKnown RBP8.98□□□□□ -0.97
LRRK1-205ENST00000526457 HLTFQ14527 1009 aaKnown RBP eCLIP8.98□□□□□ -0.97
LRRK1-205ENST00000526457 SPATA32Q96LK8 384 aa8.98□□□□□ -0.97
LRRK1-205ENST00000526457 WDR97A6NE52 1622 aa8.98□□□□□ -0.97
LRRK1-205ENST00000526457 VGFO15240 615 aaPredicted RBP8.98□□□□□ -0.97
LRRK1-205ENST00000526457 NEMFO60524 1076 aa8.98□□□□□ -0.97
LRRK1-205ENST00000526457 CCDC83Q8IWF9 413 aa8.98□□□□□ -0.97
LRRK1-205ENST00000526457 FGD6Q6ZV73 1430 aa8.98□□□□□ -0.97
LRRK1-205ENST00000526457 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.98□□□□□ -0.97
LRRK1-205ENST00000526457 L3MBTL2Q969R5 705 aa8.98□□□□□ -0.97
LRRK1-205ENST00000526457 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.98□□□□□ -0.97
LRRK1-205ENST00000526457 FEZ2Q9UHY8 353 aaPredicted RBP8.98□□□□□ -0.97
LRRK1-205ENST00000526457 V9GYY5 206 aaPredicted RBP8.98□□□□□ -0.97
LRRK1-205ENST00000526457 ZNF397Q8NF99 534 aaPredicted RBP8.98□□□□□ -0.97
LRRK1-205ENST00000526457 SNW1Q13573 536 aaKnown RBP8.98□□□□□ -0.97
LRRK1-205ENST00000526457 CCDC178Q5BJE1 867 aa8.98□□□□□ -0.97
LRRK1-205ENST00000526457 UNC13AQ9UPW8 1703 aa8.97□□□□□ -0.97
LRRK1-205ENST00000526457 HSF2BPO75031 334 aa8.97□□□□□ -0.97
LRRK1-205ENST00000526457 CLCN1P35523 988 aa8.97□□□□□ -0.97
LRRK1-205ENST00000526457 MYCBPQ99417 103 aaPredicted RBP8.97□□□□□ -0.97
LRRK1-205ENST00000526457 CCDC171Q6TFL3 1326 aa8.97□□□□□ -0.97
LRRK1-205ENST00000526457 NEBLO76041 1014 aa8.97□□□□□ -0.97
LRRK1-205ENST00000526457 KIF20AO95235 890 aa8.97□□□□□ -0.97
LRRK1-205ENST00000526457 GTF2E1P29083 439 aaPredicted RBP8.97□□□□□ -0.97
LRRK1-205ENST00000526457 MCM6Q14566 821 aa8.97□□□□□ -0.97
LRRK1-205ENST00000526457 CASKIN1Q8WXD9 1431 aa8.97□□□□□ -0.97
LRRK1-205ENST00000526457 CCDC114Q96M63 670 aa8.97□□□□□ -0.97
LRRK1-205ENST00000526457 PAFAH1B1P43034 410 aa8.97□□□□□ -0.97
LRRK1-205ENST00000526457 KIF4AO95239 1232 aa8.97□□□□□ -0.97
LRRK1-205ENST00000526457 RFC1P35251 1148 aaPredicted RBP8.97□□□□□ -0.97
LRRK1-205ENST00000526457 HOOK3Q86VS8 718 aa8.97□□□□□ -0.97
LRRK1-205ENST00000526457 CC2D2AQ9P2K1 1620 aa8.96□□□□□ -0.97
LRRK1-205ENST00000526457 TMX1Q9H3N1 280 aa8.96□□□□□ -0.97
LRRK1-205ENST00000526457 CCDC7Q96M83 1385 aa8.96□□□□□ -0.97
LRRK1-205ENST00000526457 APAF1O14727 1248 aa8.96□□□□□ -0.97
LRRK1-205ENST00000526457 SART3Q15020 963 aaKnown RBP8.96□□□□□ -0.97
LRRK1-205ENST00000526457 TOP1P11387 765 aaKnown RBP8.96□□□□□ -0.97
LRRK1-205ENST00000526457 KANK4Q5T7N3 995 aaPredicted RBP8.96□□□□□ -0.97
LRRK1-205ENST00000526457 ATRIPQ8WXE1 791 aa8.96□□□□□ -0.98
LRRK1-205ENST00000526457 SEPT14Q6ZU15 432 aa8.96□□□□□ -0.98
LRRK1-205ENST00000526457 LARP1BQ659C4 914 aaKnown RBP8.96□□□□□ -0.98
LRRK1-205ENST00000526457 NAA15Q9BXJ9 866 aaKnown RBP8.96□□□□□ -0.98
LRRK1-205ENST00000526457 IGSF3O75054 1194 aa8.96□□□□□ -0.98
LRRK1-205ENST00000526457 ZWINTO95229 277 aa8.96□□□□□ -0.98
LRRK1-205ENST00000526457 ANAPC15P60006 121 aa8.96□□□□□ -0.98
LRRK1-205ENST00000526457 MLECQ14165 292 aa8.96□□□□□ -0.98
LRRK1-205ENST00000526457 DNAJC21Q5F1R6 531 aaKnown RBP8.96□□□□□ -0.98
LRRK1-205ENST00000526457 GOLGA4Q13439 2230 aaKnown RBP8.95□□□□□ -0.98
LRRK1-205ENST00000526457 CEP120Q8N960 986 aa8.95□□□□□ -0.98
LRRK1-205ENST00000526457 SOGA3Q5TF21 947 aa8.95□□□□□ -0.98
LRRK1-205ENST00000526457 VPS37DQ86XT2 251 aa8.95□□□□□ -0.98
LRRK1-205ENST00000526457 CAMK4Q16566 473 aa8.95□□□□□ -0.98
LRRK1-205ENST00000526457 GSDMDP57764 484 aa8.95□□□□□ -0.98
LRRK1-205ENST00000526457 PDE1CQ14123 709 aaPredicted RBP8.95□□□□□ -0.98
LRRK1-205ENST00000526457 EFCAB2Q5VUJ9 269 aa8.95□□□□□ -0.98
LRRK1-205ENST00000526457 PANK3Q9H999 370 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms