RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 ERICH4A6NGS2 130 aa11.02□□□□□ -0.65
CTNND1-213ENST00000526357 FAM107BQ9H098 131 aa11.01□□□□□ -0.65
CTNND1-213ENST00000526357 MROH2BQ7Z745 1585 aa11.01□□□□□ -0.65
CTNND1-213ENST00000526357 FGFR1OPO95684 399 aaKnown RBP11.01□□□□□ -0.65
CTNND1-213ENST00000526357 BRD4O60885 1362 aaPredicted RBP11.01□□□□□ -0.65
CTNND1-213ENST00000526357 HMGB2P26583 209 aaKnown RBP11.01□□□□□ -0.65
CTNND1-213ENST00000526357 GSTTP1A0A1W2PQM5 241 aa11.01□□□□□ -0.65
CTNND1-213ENST00000526357 KIF5CO60282 957 aa11.01□□□□□ -0.65
CTNND1-213ENST00000526357 CCDC178Q5BJE1 867 aa11.01□□□□□ -0.65
CTNND1-213ENST00000526357 LARP1Q6PKG0 1096 aaKnown RBP11.01□□□□□ -0.65
CTNND1-213ENST00000526357 ZNF287Q9HBT7 754 aa11.01□□□□□ -0.65
CTNND1-213ENST00000526357 LUZP1Q86V48 1076 aa11□□□□□ -0.65
CTNND1-213ENST00000526357 ABTB2Q8N961 1025 aa11□□□□□ -0.65
CTNND1-213ENST00000526357 JPH4Q96JJ6 628 aa11□□□□□ -0.65
CTNND1-213ENST00000526357 CABP2Q9NPB3 220 aa11□□□□□ -0.65
CTNND1-213ENST00000526357 CFAP100Q494V2 611 aa11□□□□□ -0.65
CTNND1-213ENST00000526357 GOPCQ9HD26 462 aa11□□□□□ -0.65
CTNND1-213ENST00000526357 NOB1Q9ULX3 412 aaKnown RBP11□□□□□ -0.65
CTNND1-213ENST00000526357 SCLT1Q96NL6 688 aa11□□□□□ -0.65
CTNND1-213ENST00000526357 USP5P45974 858 aa11□□□□□ -0.65
CTNND1-213ENST00000526357 GIGYF2Q6Y7W6 1299 aaKnown RBP11□□□□□ -0.65
CTNND1-213ENST00000526357 SEC63Q9UGP8 760 aaKnown RBP11□□□□□ -0.65
CTNND1-213ENST00000526357 FKBP4Q02790 459 aaKnown RBP eCLIP11□□□□□ -0.65
CTNND1-213ENST00000526357 SIL1Q9H173 461 aa11□□□□□ -0.65
CTNND1-213ENST00000526357 TAOK3Q9H2K8 898 aa11□□□□□ -0.65
CTNND1-213ENST00000526357 RAI14Q9P0K7 980 aa11□□□□□ -0.65
CTNND1-213ENST00000526357 SPG7Q9UQ90 795 aa11□□□□□ -0.65
CTNND1-213ENST00000526357 PDE3AQ14432 1141 aa10.99□□□□□ -0.65
CTNND1-213ENST00000526357 TMOD2Q9NZR1 351 aa10.99□□□□□ -0.65
CTNND1-213ENST00000526357 SLC4A2P04920 1241 aa10.99□□□□□ -0.65
CTNND1-213ENST00000526357 FERP16591 822 aa10.99□□□□□ -0.65
CTNND1-213ENST00000526357 EXOSC9Q06265 439 aaKnown RBP10.99□□□□□ -0.65
CTNND1-213ENST00000526357 MAP3K11Q16584 847 aa10.99□□□□□ -0.65
CTNND1-213ENST00000526357 TICAM2Q86XR7 235 aa10.99□□□□□ -0.65
CTNND1-213ENST00000526357 DDX23Q9BUQ8 820 aaKnown RBP10.99□□□□□ -0.65
CTNND1-213ENST00000526357 C1orf115Q9H7X2 142 aa10.99□□□□□ -0.65
CTNND1-213ENST00000526357 PHAXQ9H814 394 aaKnown RBP10.99□□□□□ -0.65
CTNND1-213ENST00000526357 HDGFL1Q5TGJ6 251 aa10.99□□□□□ -0.65
CTNND1-213ENST00000526357 CACNA2D4Q7Z3S7 1137 aa10.99□□□□□ -0.65
CTNND1-213ENST00000526357 FILIP1Q7Z7B0 1213 aa10.99□□□□□ -0.65
CTNND1-213ENST00000526357 MAP4K4O95819 1239 aaPredicted RBP10.99□□□□□ -0.65
CTNND1-213ENST00000526357 UBE4AQ14139 1066 aa10.99□□□□□ -0.65
CTNND1-213ENST00000526357 AACSQ86V21 672 aa10.99□□□□□ -0.65
CTNND1-213ENST00000526357 CCDC83Q8IWF9 413 aa10.99□□□□□ -0.65
CTNND1-213ENST00000526357 JAKMIP1Q96N16 626 aaKnown RBP10.99□□□□□ -0.65
CTNND1-213ENST00000526357 SCAPERQ9BY12 1400 aa10.98□□□□□ -0.65
CTNND1-213ENST00000526357 PABPN1LA6NDY0 278 aaKnown RBP10.98□□□□□ -0.65
CTNND1-213ENST00000526357 TCP11L2Q8N4U5 519 aa10.98□□□□□ -0.65
CTNND1-213ENST00000526357 CIZ1Q9ULV3 898 aaPredicted RBP10.98□□□□□ -0.65
CTNND1-213ENST00000526357 USO1O60763 962 aaKnown RBP10.98□□□□□ -0.65
CTNND1-213ENST00000526357 COMMD10Q9Y6G5 202 aa10.98□□□□□ -0.65
CTNND1-213ENST00000526357 CCDC7Q96M83 1385 aa10.98□□□□□ -0.65
CTNND1-213ENST00000526357 ABCC8Q09428 1581 aa10.98□□□□□ -0.65
CTNND1-213ENST00000526357 POTEB2H3BUK9 544 aa10.98□□□□□ -0.65
CTNND1-213ENST00000526357 KIF20AO95235 890 aa10.98□□□□□ -0.65
CTNND1-213ENST00000526357 CTNNBL1Q8WYA6 563 aaPredicted RBP10.98□□□□□ -0.65
CTNND1-213ENST00000526357 CFAP57Q96MR6 1250 aa10.98□□□□□ -0.65
CTNND1-213ENST00000526357 IBSPP21815 317 aaPredicted RBP10.98□□□□□ -0.65
CTNND1-213ENST00000526357 PRKAR2BP31323 418 aa10.98□□□□□ -0.65
CTNND1-213ENST00000526357 MTHFSP49914 203 aa10.98□□□□□ -0.65
CTNND1-213ENST00000526357 FERMT2Q96AC1 680 aa10.98□□□□□ -0.65
CTNND1-213ENST00000526357 PTPN14Q15678 1187 aa10.97□□□□□ -0.65
CTNND1-213ENST00000526357 C6orf163Q5TEZ5 329 aa10.97□□□□□ -0.65
CTNND1-213ENST00000526357 HOMER2Q9NSB8 354 aa10.97□□□□□ -0.65
CTNND1-213ENST00000526357 BRPF3Q9ULD4 1205 aa10.97□□□□□ -0.65
CTNND1-213ENST00000526357 RRP9O43818 475 aaKnown RBP10.97□□□□□ -0.65
CTNND1-213ENST00000526357 PAFAH1B1P43034 410 aa10.97□□□□□ -0.65
CTNND1-213ENST00000526357 WDHD1O75717 1129 aaPredicted RBP10.97□□□□□ -0.65
CTNND1-213ENST00000526357 CCDC175P0C221 793 aa10.97□□□□□ -0.65
CTNND1-213ENST00000526357 ESCO1Q5FWF5 840 aa10.97□□□□□ -0.65
CTNND1-213ENST00000526357 RNF187Q5TA31 235 aaPredicted RBP10.97□□□□□ -0.65
CTNND1-213ENST00000526357 TSNARE1Q96NA8 513 aa10.97□□□□□ -0.65
CTNND1-213ENST00000526357 EHMT1Q9H9B1 1298 aa10.97□□□□□ -0.65
CTNND1-213ENST00000526357 LRP2BPQ9P2M1 347 aa10.97□□□□□ -0.65
CTNND1-213ENST00000526357 SFPQP23246 707 aaKnown RBP eCLIP10.97□□□□□ -0.651e-8■■■□□ 15.1
CTNND1-213ENST00000526357 STRN4Q9NRL3 753 aa10.97□□□□□ -0.65
CTNND1-213ENST00000526357 IGHMBP2P38935 993 aaKnown RBP10.97□□□□□ -0.65
CTNND1-213ENST00000526357 NAA15Q9BXJ9 866 aaKnown RBP10.97□□□□□ -0.65
CTNND1-213ENST00000526357 ADAMTS8Q9UP79 889 aa10.97□□□□□ -0.65
CTNND1-213ENST00000526357 CTNNA2P26232 953 aa10.96□□□□□ -0.65
CTNND1-213ENST00000526357 BCCIPQ9P287 314 aaKnown RBP eCLIP10.96□□□□□ -0.651e-6■■■■□ 21.2
CTNND1-213ENST00000526357 AIDAQ96BJ3 306 aa10.96□□□□□ -0.65
CTNND1-213ENST00000526357 RAB34Q9BZG1 259 aa10.96□□□□□ -0.65
CTNND1-213ENST00000526357 ANO10Q9NW15 660 aa10.96□□□□□ -0.65
CTNND1-213ENST00000526357 CEP126Q9P2H0 1117 aa10.96□□□□□ -0.65
CTNND1-213ENST00000526357 CGNQ9P2M7 1197 aaKnown RBP10.96□□□□□ -0.65
CTNND1-213ENST00000526357 PTPRGP23470 1445 aa10.96□□□□□ -0.65
CTNND1-213ENST00000526357 KIF4BQ2VIQ3 1234 aa10.96□□□□□ -0.66
CTNND1-213ENST00000526357 MPNDQ8N594 471 aa10.96□□□□□ -0.66
CTNND1-213ENST00000526357 FERMT1Q9BQL6 677 aa10.96□□□□□ -0.66
CTNND1-213ENST00000526357 CUL5Q93034 780 aa10.96□□□□□ -0.66
CTNND1-213ENST00000526357 TMEM266Q2M3C6 531 aa10.95□□□□□ -0.66
CTNND1-213ENST00000526357 SPECC1LQ69YQ0 1117 aa10.95□□□□□ -0.66
CTNND1-213ENST00000526357 KIF18AQ8NI77 898 aa10.95□□□□□ -0.66
CTNND1-213ENST00000526357 YEATS4O95619 227 aa10.95□□□□□ -0.66
CTNND1-213ENST00000526357 TMEM87AQ8NBN3 555 aa10.95□□□□□ -0.66
CTNND1-213ENST00000526357 ALS2CR12Q96Q35 445 aa10.95□□□□□ -0.66
CTNND1-213ENST00000526357 CHD1LQ86WJ1 897 aa10.95□□□□□ -0.66
CTNND1-213ENST00000526357 PIBF1Q8WXW3 757 aa10.95□□□□□ -0.66
CTNND1-213ENST00000526357 DDX12PQ92771 950 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms