RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 GPR25O00155 361 aa7.61□□□□□ -1.19
ECHDC1-219ENST00000526299 ZNF837Q96EG3 531 aaPredicted RBP7.61□□□□□ -1.19
ECHDC1-219ENST00000526299 RNF144AP50876 292 aaPredicted RBP7.6□□□□□ -1.19
ECHDC1-219ENST00000526299 CNTNAP5Q8WYK1 1306 aa7.59□□□□□ -1.19
ECHDC1-219ENST00000526299 USP17L8P0C7I0 530 aa7.59□□□□□ -1.19
ECHDC1-219ENST00000526299 MBIPQ9NS73 344 aa7.59□□□□□ -1.19
ECHDC1-219ENST00000526299 IGF1RP08069 1367 aa7.59□□□□□ -1.2
ECHDC1-219ENST00000526299 DBN1Q16643 649 aa7.58□□□□□ -1.2
ECHDC1-219ENST00000526299 RIPOR1Q6ZS17 1223 aa7.58□□□□□ -1.2
ECHDC1-219ENST00000526299 TRIM22Q8IYM9 498 aa7.58□□□□□ -1.2
ECHDC1-219ENST00000526299 PNMA1Q8ND90 353 aa7.58□□□□□ -1.2
ECHDC1-219ENST00000526299 FAM117AQ9C073 453 aa7.58□□□□□ -1.2
ECHDC1-219ENST00000526299 GPBP1L1Q9HC44 474 aaPredicted RBP7.58□□□□□ -1.2
ECHDC1-219ENST00000526299 ENAMQ9NRM1 1142 aa7.58□□□□□ -1.2
ECHDC1-219ENST00000526299 PLA2G4EQ3MJ16 856 aa7.57□□□□□ -1.2
ECHDC1-219ENST00000526299 ATP5J2-PTCD1G3V325 749 aa7.56□□□□□ -1.2
ECHDC1-219ENST00000526299 MEN1O00255 615 aa7.56□□□□□ -1.2
ECHDC1-219ENST00000526299 ITGB2P05107 769 aa7.56□□□□□ -1.2
ECHDC1-219ENST00000526299 SEPT12Q8IYM1 358 aa7.56□□□□□ -1.2
ECHDC1-219ENST00000526299 DCAF5Q96JK2 942 aa7.56□□□□□ -1.2
ECHDC1-219ENST00000526299 KDM4CQ9H3R0 1056 aa7.56□□□□□ -1.2
ECHDC1-219ENST00000526299 PHF20L1A8MW92 1017 aa7.55□□□□□ -1.2
ECHDC1-219ENST00000526299 MSTNO14793 375 aa7.55□□□□□ -1.2
ECHDC1-219ENST00000526299 GIGYF1O75420 1035 aaPredicted RBP7.55□□□□□ -1.2
ECHDC1-219ENST00000526299 BCRP11274 1271 aa7.55□□□□□ -1.2
ECHDC1-219ENST00000526299 NEDD1Q8NHV4 660 aa7.55□□□□□ -1.2
ECHDC1-219ENST00000526299 GTPBP3Q969Y2 492 aaKnown RBP7.55□□□□□ -1.2
ECHDC1-219ENST00000526299 ACDQ96AP0 544 aa7.55□□□□□ -1.2
ECHDC1-219ENST00000526299 GMCL1Q96IK5 515 aa7.55□□□□□ -1.2
ECHDC1-219ENST00000526299 POU4F2Q12837 409 aa7.54□□□□□ -1.2
ECHDC1-219ENST00000526299 FOXR1Q6PIV2 292 aa7.54□□□□□ -1.2
ECHDC1-219ENST00000526299 DDRGK1Q96HY6 314 aa7.54□□□□□ -1.2
ECHDC1-219ENST00000526299 GAS2L1Q99501 681 aaPredicted RBP7.54□□□□□ -1.2
ECHDC1-219ENST00000526299 SPOCK3Q9BQ16 436 aa7.54□□□□□ -1.2
ECHDC1-219ENST00000526299 TRIM34Q9BYJ4 488 aa7.54□□□□□ -1.2
ECHDC1-219ENST00000526299 A0A1W2PRU2 124 aa7.53□□□□□ -1.2
ECHDC1-219ENST00000526299 GPC1P35052 558 aa7.53□□□□□ -1.2
ECHDC1-219ENST00000526299 RFC5P40937 340 aa7.53□□□□□ -1.2
ECHDC1-219ENST00000526299 BEND7Q8N7W2 519 aaPredicted RBP7.53□□□□□ -1.2
ECHDC1-219ENST00000526299 DYRK1BQ9Y463 629 aa7.53□□□□□ -1.2
ECHDC1-219ENST00000526299 PCDHB9Q9Y5E1 797 aa7.53□□□□□ -1.2
ECHDC1-219ENST00000526299 ADAM23O75077 832 aa7.52□□□□□ -1.21
ECHDC1-219ENST00000526299 H7C1W4 665 aa7.51□□□□□ -1.21
ECHDC1-219ENST00000526299 SLC27A3Q5K4L6 730 aa7.51□□□□□ -1.21
ECHDC1-219ENST00000526299 XP32Q5T750 250 aa7.51□□□□□ -1.21
ECHDC1-219ENST00000526299 PODNQ7Z5L7 613 aa7.51□□□□□ -1.21
ECHDC1-219ENST00000526299 TRERF1Q96PN7 1200 aa7.51□□□□□ -1.21
ECHDC1-219ENST00000526299 ZBBXA8MT70 800 aa7.5□□□□□ -1.21
ECHDC1-219ENST00000526299 PROCP04070 461 aa7.5□□□□□ -1.21
ECHDC1-219ENST00000526299 MX2P20592 715 aa7.5□□□□□ -1.21
ECHDC1-219ENST00000526299 ERVK-9P63128 1117 aa7.5□□□□□ -1.21
ECHDC1-219ENST00000526299 CC2D2BQ6DHV5 1058 aa7.5□□□□□ -1.21
ECHDC1-219ENST00000526299 NBPF10Q6P3W6 841 aaKnown RBP7.5□□□□□ -1.21
ECHDC1-219ENST00000526299 NBPF15Q8N660 670 aa7.5□□□□□ -1.21
ECHDC1-219ENST00000526299 GRIP2Q9C0E4 1043 aa7.5□□□□□ -1.21
ECHDC1-219ENST00000526299 FBXO45P0C2W1 286 aa7.49□□□□□ -1.21
ECHDC1-219ENST00000526299 TRIM52Q96A61 297 aa7.49□□□□□ -1.21
ECHDC1-219ENST00000526299 NLRP3Q96P20 1036 aa7.49□□□□□ -1.21
ECHDC1-219ENST00000526299 SCTRP47872 440 aa7.48□□□□□ -1.21
ECHDC1-219ENST00000526299 NUCKS1Q9H1E3 243 aaKnown RBP7.48□□□□□ -1.21
ECHDC1-219ENST00000526299 TIMMDC1Q9NPL8 285 aa7.48□□□□□ -1.21
ECHDC1-219ENST00000526299 OIP5O43482 229 aa7.47□□□□□ -1.21
ECHDC1-219ENST00000526299 SNRPNP63162 240 aaKnown RBP7.47□□□□□ -1.21
ECHDC1-219ENST00000526299 CLN3Q13286 438 aa7.47□□□□□ -1.21
ECHDC1-219ENST00000526299 GALNT6Q8NCL4 622 aa7.47□□□□□ -1.21
ECHDC1-219ENST00000526299 ARHGEF10LQ9HCE6 1279 aa7.47□□□□□ -1.21
ECHDC1-219ENST00000526299 SPATA31C2B4DYI2 1134 aa7.46□□□□□ -1.22
ECHDC1-219ENST00000526299 THBS1P07996 1170 aa7.46□□□□□ -1.22
ECHDC1-219ENST00000526299 NSFL1CQ9UNZ2 370 aaKnown RBP7.46□□□□□ -1.22
ECHDC1-219ENST00000526299 F11P03951 625 aa7.45□□□□□ -1.22
ECHDC1-219ENST00000526299 CYP2U1Q7Z449 544 aa7.45□□□□□ -1.22
ECHDC1-219ENST00000526299 GJD4Q96KN9 370 aaPredicted RBP7.45□□□□□ -1.22
ECHDC1-219ENST00000526299 OXCT2Q9BYC2 517 aaPredicted RBP7.45□□□□□ -1.22
ECHDC1-219ENST00000526299 OSBPL3Q9H4L5 887 aa7.45□□□□□ -1.22
ECHDC1-219ENST00000526299 LRRC4BQ9NT99 713 aa7.45□□□□□ -1.22
ECHDC1-219ENST00000526299 SHISA8B8ZZ34 492 aa7.44□□□□□ -1.22
ECHDC1-219ENST00000526299 WASLO00401 505 aaPredicted RBP7.44□□□□□ -1.22
ECHDC1-219ENST00000526299 WDR44Q5JSH3 913 aa7.44□□□□□ -1.22
ECHDC1-219ENST00000526299 RNF20Q5VTR2 975 aa7.44□□□□□ -1.22
ECHDC1-219ENST00000526299 C1orf229Q6ZS94 237 aaPredicted RBP7.44□□□□□ -1.22
ECHDC1-219ENST00000526299 TAS1R3Q7RTX0 852 aa7.44□□□□□ -1.22
ECHDC1-219ENST00000526299 RAB6BQ9NRW1 208 aa7.44□□□□□ -1.22
ECHDC1-219ENST00000526299 PCDHB11Q9Y5F2 797 aa7.44□□□□□ -1.22
ECHDC1-219ENST00000526299 KRBA1A5PL33 1030 aa7.43□□□□□ -1.22
ECHDC1-219ENST00000526299 TRAK2O60296 914 aa7.43□□□□□ -1.22
ECHDC1-219ENST00000526299 MAP2K3P46734 347 aa7.43□□□□□ -1.22
ECHDC1-219ENST00000526299 TMEM259Q4ZIN3 620 aa7.43□□□□□ -1.22
ECHDC1-219ENST00000526299 CCDC125Q86Z20 511 aa7.43□□□□□ -1.22
ECHDC1-219ENST00000526299 GPAMQ9HCL2 828 aa7.43□□□□□ -1.22
ECHDC1-219ENST00000526299 PHKA2P46019 1235 aa7.42□□□□□ -1.22
ECHDC1-219ENST00000526299 KLRG1Q96E93 195 aa7.42□□□□□ -1.22
ECHDC1-219ENST00000526299 CFHR5Q9BXR6 569 aa7.42□□□□□ -1.22
ECHDC1-219ENST00000526299 K7ELQ4 463 aaPredicted RBP7.41□□□□□ -1.22
ECHDC1-219ENST00000526299 BAG6P46379 1132 aa7.41□□□□□ -1.22
ECHDC1-219ENST00000526299 IL2RAP01589 272 aa7.4□□□□□ -1.22
ECHDC1-219ENST00000526299 COL8A1P27658 744 aa7.4□□□□□ -1.22
ECHDC1-219ENST00000526299 CENPCQ03188 943 aa7.4□□□□□ -1.22
ECHDC1-219ENST00000526299 NR1H3Q13133 447 aa7.4□□□□□ -1.22
ECHDC1-219ENST00000526299 CNKSR1Q969H4 720 aa7.4□□□□□ -1.22
ECHDC1-219ENST00000526299 PCMTD1Q96MG8 357 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms