RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-223ENST00000524356 ZBTB33Q86T24 672 aa10.06□□□□□ -0.8
PCM1-223ENST00000524356 LRRC4BQ9NT99 713 aa10.06□□□□□ -0.8
PCM1-223ENST00000524356 FKBPLQ9UIM3 349 aa10.06□□□□□ -0.8
PCM1-223ENST00000524356 CTDSPL2Q05D32 466 aa10.04□□□□□ -0.8
PCM1-223ENST00000524356 FOXR1Q6PIV2 292 aa10.04□□□□□ -0.8
PCM1-223ENST00000524356 GTPBP3Q969Y2 492 aaKnown RBP10.04□□□□□ -0.8
PCM1-223ENST00000524356 OIP5O43482 229 aa10.03□□□□□ -0.8
PCM1-223ENST00000524356 COL8A1P27658 744 aa10.03□□□□□ -0.8
PCM1-223ENST00000524356 RNF144AP50876 292 aaPredicted RBP10.03□□□□□ -0.8
PCM1-223ENST00000524356 RAB15P59190 212 aa10.03□□□□□ -0.8
PCM1-223ENST00000524356 RIPOR1Q6ZS17 1223 aa10.03□□□□□ -0.8
PCM1-223ENST00000524356 KRTAP1-3Q8IUG1 177 aa10.03□□□□□ -0.8
PCM1-223ENST00000524356 HAP1P54257 671 aaPredicted RBP10.02□□□□□ -0.81
PCM1-223ENST00000524356 ERVH48-1M5A8F1 160 aa10.01□□□□□ -0.81
PCM1-223ENST00000524356 TRIM66O15016 1216 aa10.01□□□□□ -0.81
PCM1-223ENST00000524356 ADAM32Q8TC27 787 aa10.01□□□□□ -0.81
PCM1-223ENST00000524356 LRRN4Q8WUT4 740 aa10.01□□□□□ -0.81
PCM1-223ENST00000524356 NBPF20Q3BBV1 942 aa10□□□□□ -0.81
PCM1-223ENST00000524356 SHISA8B8ZZ34 492 aa9.99□□□□□ -0.81
PCM1-223ENST00000524356 MX2P20592 715 aa9.99□□□□□ -0.81
PCM1-223ENST00000524356 ZC3H15Q8WU90 426 aaKnown RBP9.99□□□□□ -0.81
PCM1-223ENST00000524356 ZC3H4Q9UPT8 1303 aaKnown RBP9.99□□□□□ -0.81
PCM1-223ENST00000524356 ITGB7P26010 798 aa9.98□□□□□ -0.81
PCM1-223ENST00000524356 DYRK1BQ9Y463 629 aa9.98□□□□□ -0.81
PCM1-223ENST00000524356 CLK2P49760 499 aaKnown RBP9.97□□□□□ -0.81
PCM1-223ENST00000524356 PTK2Q05397 1052 aa9.97□□□□□ -0.81
PCM1-223ENST00000524356 NR6A1Q15406 480 aa9.97□□□□□ -0.81
PCM1-223ENST00000524356 C1orf229Q6ZS94 237 aaPredicted RBP9.97□□□□□ -0.81
PCM1-223ENST00000524356 TRERF1Q96PN7 1200 aa9.97□□□□□ -0.81
PCM1-223ENST00000524356 OXCT2Q9BYC2 517 aaPredicted RBP9.97□□□□□ -0.81
PCM1-223ENST00000524356 H7C1W4 665 aa9.96□□□□□ -0.82
PCM1-223ENST00000524356 ALYREFQ86V81 257 aaKnown RBP9.96□□□□□ -0.82
PCM1-223ENST00000524356 MKL2Q9ULH7 1088 aa9.96□□□□□ -0.82
PCM1-223ENST00000524356 GAS2L1Q99501 681 aaPredicted RBP9.95□□□□□ -0.82
PCM1-223ENST00000524356 CYLDQ9NQC7 956 aa9.95□□□□□ -0.82
PCM1-223ENST00000524356 GPSM3Q9Y4H4 160 aa9.95□□□□□ -0.82
PCM1-223ENST00000524356 ESPNB1AK53 854 aa9.94□□□□□ -0.82
PCM1-223ENST00000524356 NSFL1CQ9UNZ2 370 aaKnown RBP9.94□□□□□ -0.82
PCM1-223ENST00000524356 GPC1P35052 558 aa9.92□□□□□ -0.82
PCM1-223ENST00000524356 POU4F2Q12837 409 aa9.92□□□□□ -0.82
PCM1-223ENST00000524356 THBS1P07996 1170 aa9.91□□□□□ -0.82
PCM1-223ENST00000524356 HOXB4P17483 251 aaPredicted RBP9.91□□□□□ -0.82
PCM1-223ENST00000524356 SUV39H2Q9H5I1 410 aa9.91□□□□□ -0.82
PCM1-223ENST00000524356 C1QTNF9BB2RNN3 333 aa9.9□□□□□ -0.82
PCM1-223ENST00000524356 ATP5J2-PTCD1G3V325 749 aa9.9□□□□□ -0.82
PCM1-223ENST00000524356 MEN1O00255 615 aa9.9□□□□□ -0.82
PCM1-223ENST00000524356 MAP2K3P46734 347 aa9.9□□□□□ -0.82
PCM1-223ENST00000524356 FBXO31Q5XUX0 539 aaPredicted RBP9.9□□□□□ -0.82
PCM1-223ENST00000524356 NUCKS1Q9H1E3 243 aaKnown RBP9.9□□□□□ -0.82
PCM1-223ENST00000524356 GRIN2CQ14957 1233 aa9.89□□□□□ -0.83
PCM1-223ENST00000524356 NBPF10Q6P3W6 841 aaKnown RBP9.89□□□□□ -0.83
PCM1-223ENST00000524356 DZIP3Q86Y13 1208 aaKnown RBP9.89□□□□□ -0.83
PCM1-223ENST00000524356 NBPF15Q8N660 670 aa9.89□□□□□ -0.83
PCM1-223ENST00000524356 RRAGCQ9HB90 399 aa9.89□□□□□ -0.83
PCM1-223ENST00000524356 POLR3EQ9NVU0 708 aa9.89□□□□□ -0.83
PCM1-223ENST00000524356 A0A1W2PRU2 124 aa9.88□□□□□ -0.83
PCM1-223ENST00000524356 LINC00114Q6XXX2 140 aa9.88□□□□□ -0.83
PCM1-223ENST00000524356 CD163Q86VB7 1156 aa9.88□□□□□ -0.83
PCM1-223ENST00000524356 KLRG1Q96E93 195 aa9.88□□□□□ -0.83
PCM1-223ENST00000524356 KRTAP4-12Q9BQ66 201 aa9.88□□□□□ -0.83
PCM1-223ENST00000524356 LCE3BQ5TA77 95 aa9.87□□□□□ -0.83
PCM1-223ENST00000524356 PPP2R2DQ66LE6 453 aa9.87□□□□□ -0.83
PCM1-223ENST00000524356 EPS8L1Q8TE68 723 aa9.87□□□□□ -0.83
PCM1-223ENST00000524356 EDARADDQ8WWZ3 215 aa9.87□□□□□ -0.83
PCM1-223ENST00000524356 AK7Q96M32 723 aa9.87□□□□□ -0.83
PCM1-223ENST00000524356 GRIP2Q9C0E4 1043 aa9.86□□□□□ -0.83
PCM1-223ENST00000524356 CHRNA4P43681 627 aa9.85□□□□□ -0.83
PCM1-223ENST00000524356 SLC27A3Q5K4L6 730 aa9.85□□□□□ -0.83
PCM1-223ENST00000524356 SEPT12Q8IYM1 358 aa9.85□□□□□ -0.83
PCM1-223ENST00000524356 CFHR5Q9BXR6 569 aa9.85□□□□□ -0.83
PCM1-223ENST00000524356 F11P03951 625 aa9.84□□□□□ -0.83
PCM1-223ENST00000524356 PDE4DQ08499 809 aa9.84□□□□□ -0.83
PCM1-223ENST00000524356 SPATA31C2B4DYI2 1134 aa9.83□□□□□ -0.84
PCM1-223ENST00000524356 TIMMDC1Q9NPL8 285 aa9.83□□□□□ -0.84
PCM1-223ENST00000524356 GDF2Q9UK05 429 aaPredicted RBP9.83□□□□□ -0.84
PCM1-223ENST00000524356 WDR44Q5JSH3 913 aa9.82□□□□□ -0.84
PCM1-223ENST00000524356 SEMA6BQ9H3T3 888 aa9.82□□□□□ -0.84
PCM1-223ENST00000524356 ZMYM1Q5SVZ6 1142 aa9.81□□□□□ -0.84
PCM1-223ENST00000524356 WASLO00401 505 aaPredicted RBP9.8□□□□□ -0.84
PCM1-223ENST00000524356 UBAP2LQ14157 1087 aaKnown RBP9.8□□□□□ -0.84
PCM1-223ENST00000524356 NLRP3Q96P20 1036 aa9.8□□□□□ -0.84
PCM1-223ENST00000524356 RSPH6AQ9H0K4 717 aa9.8□□□□□ -0.84
PCM1-223ENST00000524356 HMX1Q9NP08 348 aaPredicted RBP9.8□□□□□ -0.84
PCM1-223ENST00000524356 GNB5O14775 395 aa9.79□□□□□ -0.84
PCM1-223ENST00000524356 ERVK-9P63128 1117 aa9.79□□□□□ -0.84
PCM1-223ENST00000524356 CLN3Q13286 438 aa9.79□□□□□ -0.84
PCM1-223ENST00000524356 DOC2BQ14184 412 aa9.79□□□□□ -0.84
PCM1-223ENST00000524356 GOLGA6L1Q8N7Z2 621 aa9.79□□□□□ -0.84
PCM1-223ENST00000524356 C2CD2LO14523 706 aa9.78□□□□□ -0.84
PCM1-223ENST00000524356 AMPD1P23109 780 aa9.78□□□□□ -0.84
PCM1-223ENST00000524356 TAS1R3Q7RTX0 852 aa9.78□□□□□ -0.84
PCM1-223ENST00000524356 VSIG10Q8N0Z9 540 aa9.78□□□□□ -0.84
PCM1-223ENST00000524356 GPAMQ9HCL2 828 aa9.78□□□□□ -0.84
PCM1-223ENST00000524356 SLC24A1O60721 1099 aa9.77□□□□□ -0.85
PCM1-223ENST00000524356 GIGYF1O75420 1035 aaPredicted RBP9.77□□□□□ -0.85
PCM1-223ENST00000524356 FOXD4L6Q3SYB3 417 aaPredicted RBP9.77□□□□□ -0.85
PCM1-223ENST00000524356 FOXD4L3Q6VB84 417 aaPredicted RBP9.77□□□□□ -0.85
PCM1-223ENST00000524356 SLCO4C1Q6ZQN7 724 aa9.77□□□□□ -0.85
PCM1-223ENST00000524356 DGKGP49619 791 aa9.76□□□□□ -0.85
PCM1-223ENST00000524356 GGA1Q9UJY5 639 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms