RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 TEX2Q8IWB9 1127 aa12.38□□□□□ -0.43
SPIDR-224ENST00000524126 KCNF1Q9H3M0 494 aa12.38□□□□□ -0.43
SPIDR-224ENST00000524126 CEBPAP49715 358 aaPredicted RBP12.38□□□□□ -0.43
SPIDR-224ENST00000524126 NGEFQ8N5V2 710 aa12.38□□□□□ -0.43
SPIDR-224ENST00000524126 DDX41Q9UJV9 622 aaKnown RBP12.38□□□□□ -0.43
SPIDR-224ENST00000524126 DDX19BQ9UMR2 479 aa12.38□□□□□ -0.43
SPIDR-224ENST00000524126 IFT172Q9UG01 1749 aa12.37□□□□□ -0.43
SPIDR-224ENST00000524126 TULP2O00295 520 aa12.37□□□□□ -0.43
SPIDR-224ENST00000524126 PREX1Q8TCU6 1659 aa12.37□□□□□ -0.43
SPIDR-224ENST00000524126 LAMC1P11047 1609 aa12.37□□□□□ -0.43
SPIDR-224ENST00000524126 ARHGEF40Q8TER5 1519 aa12.37□□□□□ -0.43
SPIDR-224ENST00000524126 RABEP1Q15276 862 aa12.37□□□□□ -0.43
SPIDR-224ENST00000524126 KLHL34Q8N239 644 aa12.37□□□□□ -0.43
SPIDR-224ENST00000524126 GDPD2Q9HCC8 539 aa12.37□□□□□ -0.43
SPIDR-224ENST00000524126 ST7Q9NRC1 585 aa12.37□□□□□ -0.43
SPIDR-224ENST00000524126 TRAK1Q9UPV9 953 aa12.37□□□□□ -0.43
SPIDR-224ENST00000524126 MBD3O95983 291 aa12.36□□□□□ -0.43
SPIDR-224ENST00000524126 KIAA1524Q8TCG1 905 aa12.36□□□□□ -0.43
SPIDR-224ENST00000524126 NPC1L1Q9UHC9 1359 aa12.36□□□□□ -0.43
SPIDR-224ENST00000524126 GADD45BO75293 160 aaPredicted RBP12.36□□□□□ -0.43
SPIDR-224ENST00000524126 ZBTB40Q9NUA8 1239 aa12.36□□□□□ -0.43
SPIDR-224ENST00000524126 SMARCA5O60264 1052 aaPredicted RBP12.35□□□□□ -0.43
SPIDR-224ENST00000524126 SSH1Q8WYL5 1049 aa12.35□□□□□ -0.43
SPIDR-224ENST00000524126 RUNDC1Q96C34 613 aa12.35□□□□□ -0.43
SPIDR-224ENST00000524126 NOB1Q9ULX3 412 aaKnown RBP12.35□□□□□ -0.43
SPIDR-224ENST00000524126 PPLO60437 1756 aa12.35□□□□□ -0.43
SPIDR-224ENST00000524126 PIK3C2BO00750 1634 aa12.35□□□□□ -0.43
SPIDR-224ENST00000524126 VGFO15240 615 aaPredicted RBP12.35□□□□□ -0.43
SPIDR-224ENST00000524126 HCLS1P14317 486 aaPredicted RBP12.35□□□□□ -0.43
SPIDR-224ENST00000524126 SAFB2Q14151 953 aaKnown RBP eCLIP12.35□□□□□ -0.432e-6■■■■□ 22
SPIDR-224ENST00000524126 SPC24Q8NBT2 197 aa12.35□□□□□ -0.43
SPIDR-224ENST00000524126 WDR63Q8IWG1 891 aa12.34□□□□□ -0.43
SPIDR-224ENST00000524126 KIF18AQ8NI77 898 aa12.34□□□□□ -0.43
SPIDR-224ENST00000524126 C1orf115Q9H7X2 142 aa12.34□□□□□ -0.43
SPIDR-224ENST00000524126 CWC22Q9HCG8 908 aaKnown RBP12.34□□□□□ -0.43
SPIDR-224ENST00000524126 MORC2Q9Y6X9 1032 aaPredicted RBP12.34□□□□□ -0.43
SPIDR-224ENST00000524126 CHRM1P11229 460 aaPredicted RBP12.34□□□□□ -0.43
SPIDR-224ENST00000524126 EXOSC9Q06265 439 aaKnown RBP12.34□□□□□ -0.43
SPIDR-224ENST00000524126 ATF7IPQ6VMQ6 1270 aa12.34□□□□□ -0.43
SPIDR-224ENST00000524126 PHF23Q9BUL5 403 aaPredicted RBP12.34□□□□□ -0.43
SPIDR-224ENST00000524126 IQGAP1P46940 1657 aa12.33□□□□□ -0.43
SPIDR-224ENST00000524126 AP5Z1O43299 807 aa12.33□□□□□ -0.44
SPIDR-224ENST00000524126 CDC45O75419 566 aa12.33□□□□□ -0.44
SPIDR-224ENST00000524126 CALCOCO1Q9P1Z2 691 aa12.33□□□□□ -0.44
SPIDR-224ENST00000524126 ZC3H13Q5T200 1668 aaKnown RBP12.33□□□□□ -0.44
SPIDR-224ENST00000524126 ERVK-7P63135 1459 aa12.33□□□□□ -0.44
SPIDR-224ENST00000524126 IQSEC2Q5JU85 1478 aa12.33□□□□□ -0.44
SPIDR-224ENST00000524126 STK26Q9P289 416 aa12.32□□□□□ -0.44
SPIDR-224ENST00000524126 FEZ2Q9UHY8 353 aaPredicted RBP12.32□□□□□ -0.44
SPIDR-224ENST00000524126 GSPT1P15170 499 aaKnown RBP12.32□□□□□ -0.44
SPIDR-224ENST00000524126 CARD14Q9BXL6 1004 aa12.32□□□□□ -0.44
SPIDR-224ENST00000524126 STAG3Q9UJ98 1225 aa12.32□□□□□ -0.44
SPIDR-224ENST00000524126 NEXMIFQ5QGS0 1516 aa12.32□□□□□ -0.44
SPIDR-224ENST00000524126 MYOM1P52179 1685 aa12.32□□□□□ -0.44
SPIDR-224ENST00000524126 MYOM2P54296 1465 aa12.31□□□□□ -0.44
SPIDR-224ENST00000524126 KRT222Q8N1A0 295 aa12.31□□□□□ -0.44
SPIDR-224ENST00000524126 AGLP35573 1532 aa12.31□□□□□ -0.44
SPIDR-224ENST00000524126 UVSSAQ2YD98 709 aa12.31□□□□□ -0.44
SPIDR-224ENST00000524126 C16orf45Q96MC5 204 aaPredicted RBP12.31□□□□□ -0.44
SPIDR-224ENST00000524126 SCAF11Q99590 1463 aaKnown RBP12.31□□□□□ -0.44
SPIDR-224ENST00000524126 SYAP1Q96A49 352 aaPredicted RBP12.3□□□□□ -0.44
SPIDR-224ENST00000524126 USP26Q9BXU7 913 aa12.3□□□□□ -0.44
SPIDR-224ENST00000524126 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.3□□□□□ -0.44
SPIDR-224ENST00000524126 V9GYY5 206 aaPredicted RBP12.3□□□□□ -0.44
SPIDR-224ENST00000524126 TMEM131LA2VDJ0 1609 aa12.3□□□□□ -0.44
SPIDR-224ENST00000524126 REREQ9P2R6 1566 aa12.3□□□□□ -0.44
SPIDR-224ENST00000524126 HNRNPH2P55795 449 aaKnown RBP12.3□□□□□ -0.44
SPIDR-224ENST00000524126 NRXN1Q9ULB1 1477 aa12.3□□□□□ -0.44
SPIDR-224ENST00000524126 KDM4AO75164 1064 aa12.29□□□□□ -0.44
SPIDR-224ENST00000524126 TMX1Q9H3N1 280 aa12.29□□□□□ -0.44
SPIDR-224ENST00000524126 ESF1Q9H501 851 aaKnown RBP12.29□□□□□ -0.44
SPIDR-224ENST00000524126 SHPRHQ149N8 1683 aa12.29□□□□□ -0.44
SPIDR-224ENST00000524126 KMT5BQ4FZB7 885 aa12.29□□□□□ -0.44
SPIDR-224ENST00000524126 NOL8Q76FK4 1167 aaKnown RBP12.29□□□□□ -0.44
SPIDR-224ENST00000524126 C14orf93Q9H972 538 aaKnown RBP12.29□□□□□ -0.44
SPIDR-224ENST00000524126 POLR3AO14802 1390 aaPredicted RBP12.29□□□□□ -0.44
SPIDR-224ENST00000524126 ANKRD36BQ8N2N9 1353 aa12.29□□□□□ -0.44
SPIDR-224ENST00000524126 PPIP5K1Q6PFW1 1433 aa12.29□□□□□ -0.44
SPIDR-224ENST00000524126 ST18O60284 1047 aa12.28□□□□□ -0.44
SPIDR-224ENST00000524126 FAM184AQ8NB25 1140 aa12.28□□□□□ -0.44
SPIDR-224ENST00000524126 BRD1O95696 1058 aa12.28□□□□□ -0.44
SPIDR-224ENST00000524126 PTGS1P23219 599 aa12.28□□□□□ -0.44
SPIDR-224ENST00000524126 USP48Q86UV5 1035 aa12.28□□□□□ -0.44
SPIDR-224ENST00000524126 SLC52A1Q9NWF4 448 aa12.28□□□□□ -0.44
SPIDR-224ENST00000524126 PHF14O94880 888 aa12.27□□□□□ -0.44
SPIDR-224ENST00000524126 SMTNL1A8MU46 457 aa12.27□□□□□ -0.45
SPIDR-224ENST00000524126 RAD51AP2Q09MP3 1159 aa12.27□□□□□ -0.45
SPIDR-224ENST00000524126 ADGRB1O14514 1584 aa12.27□□□□□ -0.45
SPIDR-224ENST00000524126 NEURL4Q96JN8 1562 aa12.27□□□□□ -0.45
SPIDR-224ENST00000524126 U2SURPO15042 1029 aaKnown RBP12.26□□□□□ -0.45
SPIDR-224ENST00000524126 SOX12O15370 315 aa12.26□□□□□ -0.45
SPIDR-224ENST00000524126 SRPK2P78362 688 aaKnown RBP12.26□□□□□ -0.45
SPIDR-224ENST00000524126 LRMPQ12912 555 aa12.26□□□□□ -0.45
SPIDR-224ENST00000524126 SYCP1Q15431 976 aa12.26□□□□□ -0.45
SPIDR-224ENST00000524126 TNNT1P13805 278 aa12.25□□□□□ -0.45
SPIDR-224ENST00000524126 RBM6P78332 1123 aaKnown RBP12.25□□□□□ -0.45
SPIDR-224ENST00000524126 SIRT2Q8IXJ6 389 aa12.25□□□□□ -0.45
SPIDR-224ENST00000524126 RTF1Q92541 710 aaKnown RBP12.25□□□□□ -0.45
SPIDR-224ENST00000524126 ZNF592Q92610 1267 aa12.25□□□□□ -0.45
SPIDR-224ENST00000524126 TMX3Q96JJ7 454 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 204.8 ms