RNA–Protein interactions for RNA: ENST00000524074.1

PFDN1-207, Transcript of prefoldin subunit 1, humanhuman

TSL 5 BASIC

Gene PFDN1, Length 395 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-207ENST00000524074 ZNF687Q8N1G0 1237 aa13.4□□□□□ -0.26
PFDN1-207ENST00000524074 ARHGAP4P98171 946 aa13.39□□□□□ -0.27
PFDN1-207ENST00000524074 TSNAXIP1Q2TAA8 658 aa13.39□□□□□ -0.27
PFDN1-207ENST00000524074 RGL4Q8IZJ4 473 aa13.39□□□□□ -0.27
PFDN1-207ENST00000524074 CCDC24Q8N4L8 307 aa13.39□□□□□ -0.27
PFDN1-207ENST00000524074 SLC10A4Q96EP9 437 aa13.39□□□□□ -0.27
PFDN1-207ENST00000524074 WEE1P30291 646 aa13.38□□□□□ -0.27
PFDN1-207ENST00000524074 MTMR3Q13615 1198 aa13.38□□□□□ -0.27
PFDN1-207ENST00000524074 AGERQ15109 404 aa13.38□□□□□ -0.27
PFDN1-207ENST00000524074 FAM177A1Q8N128 213 aaPredicted RBP13.38□□□□□ -0.27
PFDN1-207ENST00000524074 PCDHB11Q9Y5F2 797 aa13.38□□□□□ -0.27
PFDN1-207ENST00000524074 BCAMP50895 628 aa13.37□□□□□ -0.27
PFDN1-207ENST00000524074 FKBP5Q13451 457 aaPredicted RBP13.37□□□□□ -0.27
PFDN1-207ENST00000524074 ECM1Q16610 540 aa13.37□□□□□ -0.27
PFDN1-207ENST00000524074 NBPF20Q3BBV1 942 aa13.37□□□□□ -0.27
PFDN1-207ENST00000524074 POTEHQ6S545 545 aa13.37□□□□□ -0.27
PFDN1-207ENST00000524074 SH3RF1Q7Z6J0 888 aa13.37□□□□□ -0.27
PFDN1-207ENST00000524074 BPHLQ86WA6 291 aaPredicted RBP13.37□□□□□ -0.27
PFDN1-207ENST00000524074 STAC3Q96MF2 364 aa13.37□□□□□ -0.27
PFDN1-207ENST00000524074 M0R2N6 131 aa13.36□□□□□ -0.27
PFDN1-207ENST00000524074 ERFEQ4G0M1 354 aa13.36□□□□□ -0.27
PFDN1-207ENST00000524074 TSEN2Q8NCE0 465 aaKnown RBP13.36□□□□□ -0.27
PFDN1-207ENST00000524074 CDK11BP21127 795 aaKnown RBP13.35□□□□□ -0.27
PFDN1-207ENST00000524074 ADGRD1Q6QNK2 874 aa13.35□□□□□ -0.27
PFDN1-207ENST00000524074 CDK11AQ9UQ88 783 aaPredicted RBP13.35□□□□□ -0.27
PFDN1-207ENST00000524074 CCDC125Q86Z20 511 aa13.34□□□□□ -0.27
PFDN1-207ENST00000524074 EMP3P54852 163 aa13.33□□□□□ -0.28
PFDN1-207ENST00000524074 COPS2P61201 443 aa13.33□□□□□ -0.28
PFDN1-207ENST00000524074 NAALADL2Q58DX5 795 aa13.33□□□□□ -0.28
PFDN1-207ENST00000524074 PTCRAQ6ISU1 281 aaPredicted RBP13.33□□□□□ -0.28
PFDN1-207ENST00000524074 CAPN12Q6ZSI9 719 aa13.33□□□□□ -0.28
PFDN1-207ENST00000524074 HELQQ8TDG4 1101 aa13.33□□□□□ -0.28
PFDN1-207ENST00000524074 COL26A1Q96A83 441 aa13.33□□□□□ -0.28
PFDN1-207ENST00000524074 SF3A1Q15459 793 aaKnown RBP13.32□□□□□ -0.28
PFDN1-207ENST00000524074 FAM13AO94988 1023 aa13.31□□□□□ -0.28
PFDN1-207ENST00000524074 MYCP01106 439 aaPredicted RBP13.31□□□□□ -0.28
PFDN1-207ENST00000524074 SEPT12Q8IYM1 358 aa13.31□□□□□ -0.28
PFDN1-207ENST00000524074 ADH1BP00325 375 aa13.3□□□□□ -0.28
PFDN1-207ENST00000524074 ERCC5P28715 1186 aaPredicted RBP13.3□□□□□ -0.28
PFDN1-207ENST00000524074 NAA30Q147X3 362 aaPredicted RBP13.3□□□□□ -0.28
PFDN1-207ENST00000524074 PURBQ96QR8 312 aaKnown RBP13.3□□□□□ -0.28
PFDN1-207ENST00000524074 PPP1R1BQ9UD71 204 aaPredicted RBP13.3□□□□□ -0.28
PFDN1-207ENST00000524074 ESPNB1AK53 854 aa13.29□□□□□ -0.28
PFDN1-207ENST00000524074 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.29□□□□□ -0.28
PFDN1-207ENST00000524074 BAP1Q92560 729 aa13.29□□□□□ -0.28
PFDN1-207ENST00000524074 UBXN4Q92575 508 aa13.29□□□□□ -0.28
PFDN1-207ENST00000524074 RBCK1Q9BYM8 510 aa13.29□□□□□ -0.28
PFDN1-207ENST00000524074 PCDH10Q9P2E7 1040 aa13.29□□□□□ -0.28
PFDN1-207ENST00000524074 FOXO3O43524 673 aa13.28□□□□□ -0.28
PFDN1-207ENST00000524074 HRO43593 1189 aa13.28□□□□□ -0.28
PFDN1-207ENST00000524074 NDUFB5O43674 189 aa13.28□□□□□ -0.28
PFDN1-207ENST00000524074 P4HBP07237 508 aaKnown RBP13.28□□□□□ -0.28
PFDN1-207ENST00000524074 LINC01559Q495D7 138 aa13.28□□□□□ -0.28
PFDN1-207ENST00000524074 FOXJ1Q92949 421 aa13.28□□□□□ -0.28
PFDN1-207ENST00000524074 WNT2BQ93097 391 aa13.28□□□□□ -0.28
PFDN1-207ENST00000524074 BACH2Q9BYV9 841 aa13.28□□□□□ -0.28
PFDN1-207ENST00000524074 CDV3Q9UKY7 258 aaKnown RBP13.28□□□□□ -0.28
PFDN1-207ENST00000524074 IGFBP4P22692 258 aa13.27□□□□□ -0.29
PFDN1-207ENST00000524074 TMC7Q7Z402 723 aa13.27□□□□□ -0.29
PFDN1-207ENST00000524074 FAM205CA6NFA0 338 aa13.26□□□□□ -0.29
PFDN1-207ENST00000524074 SCAMP3O14828 347 aaKnown RBP13.26□□□□□ -0.29
PFDN1-207ENST00000524074 TLL1O43897 1013 aa13.26□□□□□ -0.29
PFDN1-207ENST00000524074 LSM11P83369 360 aaKnown RBP eCLIP13.26□□□□□ -0.29
PFDN1-207ENST00000524074 ZNF511Q8NB15 262 aa13.26□□□□□ -0.29
PFDN1-207ENST00000524074 VTI1AQ96AJ9 217 aa13.26□□□□□ -0.29
PFDN1-207ENST00000524074 ZNF358Q9NW07 568 aa13.26□□□□□ -0.29
PFDN1-207ENST00000524074 MRPL58Q14197 206 aaKnown RBP13.25□□□□□ -0.29
PFDN1-207ENST00000524074 NPR3P17342 541 aa13.24□□□□□ -0.29
PFDN1-207ENST00000524074 FGD1P98174 961 aa13.24□□□□□ -0.29
PFDN1-207ENST00000524074 C4orf48Q5BLP8 95 aa13.24□□□□□ -0.29
PFDN1-207ENST00000524074 GAS2L2Q8NHY3 880 aa13.24□□□□□ -0.29
PFDN1-207ENST00000524074 TMC1Q8TDI8 760 aa13.24□□□□□ -0.29
PFDN1-207ENST00000524074 WBP1LQ9NX94 342 aa13.24□□□□□ -0.29
PFDN1-207ENST00000524074 BRPF3Q9ULD4 1205 aa13.24□□□□□ -0.29
PFDN1-207ENST00000524074 RAB15P59190 212 aa13.23□□□□□ -0.29
PFDN1-207ENST00000524074 ESF1Q9H501 851 aaKnown RBP13.23□□□□□ -0.29
PFDN1-207ENST00000524074 MPSTP25325 297 aa13.22□□□□□ -0.29
PFDN1-207ENST00000524074 CANXP27824 592 aaKnown RBP13.22□□□□□ -0.29
PFDN1-207ENST00000524074 ITGAEP38570 1179 aa13.22□□□□□ -0.29
PFDN1-207ENST00000524074 XPCQ01831 940 aaPredicted RBP13.22□□□□□ -0.29
PFDN1-207ENST00000524074 SCG3Q8WXD2 468 aaKnown RBP13.22□□□□□ -0.29
PFDN1-207ENST00000524074 C1QTNF2Q9BXJ5 285 aa13.22□□□□□ -0.29
PFDN1-207ENST00000524074 ZPR1O75312 459 aa13.21□□□□□ -0.29
PFDN1-207ENST00000524074 HDLBPQ00341 1268 aaKnown RBP13.21□□□□□ -0.29
PFDN1-207ENST00000524074 MARVELD3Q96A59 401 aa13.21□□□□□ -0.29
PFDN1-207ENST00000524074 BACH1O14867 736 aa13.2□□□□□ -0.3
PFDN1-207ENST00000524074 TREHO43280 583 aa13.2□□□□□ -0.3
PFDN1-207ENST00000524074 FMR1Q06787 632 aaKnown RBP eCLIP13.2□□□□□ -0.3
PFDN1-207ENST00000524074 TRMT44Q8IYL2 757 aaKnown RBP13.2□□□□□ -0.3
PFDN1-207ENST00000524074 SLC6A16Q9GZN6 736 aa13.2□□□□□ -0.3
PFDN1-207ENST00000524074 MRS2Q9HD23 443 aa13.2□□□□□ -0.3
PFDN1-207ENST00000524074 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.2□□□□□ -0.3
PFDN1-207ENST00000524074 CITED4Q96RK1 184 aa13.19□□□□□ -0.3
PFDN1-207ENST00000524074 AAMPQ13685 434 aa13.18□□□□□ -0.3
PFDN1-207ENST00000524074 TMEM229AB2RXF0 380 aa13.17□□□□□ -0.3
PFDN1-207ENST00000524074 LDHBP07195 334 aaKnown RBP13.17□□□□□ -0.3
PFDN1-207ENST00000524074 MAPK8P45983 427 aa13.17□□□□□ -0.3
PFDN1-207ENST00000524074 C9orf131Q5VYM1 1079 aa13.17□□□□□ -0.3
PFDN1-207ENST00000524074 C16orf46Q6P387 395 aa13.17□□□□□ -0.3
PFDN1-207ENST00000524074 CHMP7Q8WUX9 453 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms