RNA–Protein interactions for RNA: ENST00000522777.1

PCM1-216, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-216ENST00000522777 KCNA1Q09470 495 aa10.77□□□□□ -0.69
PCM1-216ENST00000522777 RNF20Q5VTR2 975 aa10.77□□□□□ -0.69
PCM1-216ENST00000522777 LARP1Q6PKG0 1096 aaKnown RBP10.77□□□□□ -0.69
PCM1-216ENST00000522777 CDCA7Q9BWT1 371 aaPredicted RBP10.77□□□□□ -0.69
PCM1-216ENST00000522777 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.77□□□□□ -0.69
PCM1-216ENST00000522777 DKK1O94907 266 aa10.76□□□□□ -0.69
PCM1-216ENST00000522777 FAM69CQ0P6D2 419 aa10.76□□□□□ -0.69
PCM1-216ENST00000522777 SEPT12Q8IYM1 358 aa10.76□□□□□ -0.69
PCM1-216ENST00000522777 OGFOD1Q8N543 542 aa10.76□□□□□ -0.69
PCM1-216ENST00000522777 EMID1Q96A84 441 aaPredicted RBP10.76□□□□□ -0.69
PCM1-216ENST00000522777 NOD1Q9Y239 953 aa10.76□□□□□ -0.69
PCM1-216ENST00000522777 MAP4K5Q9Y4K4 846 aa10.76□□□□□ -0.69
PCM1-216ENST00000522777 VARSP26640 1264 aaKnown RBP10.75□□□□□ -0.69
PCM1-216ENST00000522777 OXLD1Q5BKU9 147 aa10.75□□□□□ -0.69
PCM1-216ENST00000522777 TRIM50Q86XT4 487 aa10.75□□□□□ -0.69
PCM1-216ENST00000522777 ANKMY2Q8IV38 441 aa10.75□□□□□ -0.69
PCM1-216ENST00000522777 SLAIN2Q9P270 581 aa10.75□□□□□ -0.69
PCM1-216ENST00000522777 KIAA1024Q9UPX6 916 aa10.75□□□□□ -0.69
PCM1-216ENST00000522777 KCTD15Q96SI1 283 aaPredicted RBP10.74□□□□□ -0.69
PCM1-216ENST00000522777 DNAAF2Q9NVR5 837 aaKnown RBP10.74□□□□□ -0.69
PCM1-216ENST00000522777 TOPBP1Q92547 1522 aa10.74□□□□□ -0.69
PCM1-216ENST00000522777 EIF4G3O43432 1585 aaKnown RBP10.73□□□□□ -0.69
PCM1-216ENST00000522777 PATL2C9JE40 543 aaKnown RBP10.73□□□□□ -0.69
PCM1-216ENST00000522777 INTS6LQ5JSJ4 861 aaKnown RBP10.73□□□□□ -0.69
PCM1-216ENST00000522777 SIX5Q8N196 739 aa10.73□□□□□ -0.69
PCM1-216ENST00000522777 ZNF594Q96JF6 807 aaPredicted RBP10.73□□□□□ -0.69
PCM1-216ENST00000522777 PCDHB11Q9Y5F2 797 aa10.73□□□□□ -0.69
PCM1-216ENST00000522777 AQRO60306 1485 aaKnown RBP eCLIP10.73□□□□□ -0.69
PCM1-216ENST00000522777 ZBTB7BO15156 539 aaPredicted RBP10.72□□□□□ -0.69
PCM1-216ENST00000522777 ATP1A2P50993 1020 aa10.72□□□□□ -0.69
PCM1-216ENST00000522777 GTF2IP78347 998 aa10.72□□□□□ -0.69
PCM1-216ENST00000522777 LIAT1Q6ZQX7 453 aa10.72□□□□□ -0.69
PCM1-216ENST00000522777 CCDC125Q86Z20 511 aa10.72□□□□□ -0.69
PCM1-216ENST00000522777 TOP2AP11388 1531 aaKnown RBP10.72□□□□□ -0.69
PCM1-216ENST00000522777 ABCC8Q09428 1581 aa10.71□□□□□ -0.69
PCM1-216ENST00000522777 DPYDQ12882 1025 aa10.71□□□□□ -0.69
PCM1-216ENST00000522777 PHLDB3Q6NSJ2 640 aa10.71□□□□□ -0.69
PCM1-216ENST00000522777 LARGE2Q8N3Y3 721 aa10.71□□□□□ -0.69
PCM1-216ENST00000522777 FAM200AQ8TCP9 573 aa10.71□□□□□ -0.69
PCM1-216ENST00000522777 PCDHGA11Q9Y5H2 935 aa10.71□□□□□ -0.69
PCM1-216ENST00000522777 CHD1O14646 1710 aa10.7□□□□□ -0.7
PCM1-216ENST00000522777 EHBP1Q8NDI1 1231 aa10.7□□□□□ -0.7
PCM1-216ENST00000522777 CLP1Q92989 425 aaKnown RBP10.7□□□□□ -0.7
PCM1-216ENST00000522777 CDK15Q96Q40 435 aa10.7□□□□□ -0.7
PCM1-216ENST00000522777 GZF1Q9H116 711 aaPredicted RBP10.7□□□□□ -0.7
PCM1-216ENST00000522777 RC3H1Q5TC82 1133 aaKnown RBP10.69□□□□□ -0.7
PCM1-216ENST00000522777 IFFO2Q5TF58 517 aa10.69□□□□□ -0.7
PCM1-216ENST00000522777 VASH1Q7L8A9 365 aaPredicted RBP10.69□□□□□ -0.7
PCM1-216ENST00000522777 ERVH48-1M5A8F1 160 aa10.68□□□□□ -0.7
PCM1-216ENST00000522777 RAB15P59190 212 aa10.68□□□□□ -0.7
PCM1-216ENST00000522777 B4GALNT3Q6L9W6 998 aa10.68□□□□□ -0.7
PCM1-216ENST00000522777 CCDC9Q9Y3X0 531 aaKnown RBP10.68□□□□□ -0.7
PCM1-216ENST00000522777 TLL2Q9Y6L7 1015 aa10.68□□□□□ -0.7
PCM1-216ENST00000522777 CD2BP2O95400 341 aaKnown RBP10.67□□□□□ -0.7
PCM1-216ENST00000522777 SCTRP47872 440 aa10.67□□□□□ -0.7
PCM1-216ENST00000522777 USP4Q13107 963 aa10.67□□□□□ -0.7
PCM1-216ENST00000522777 MMRN1Q13201 1228 aa10.67□□□□□ -0.7
PCM1-216ENST00000522777 SWI5Q1ZZU3 235 aa10.67□□□□□ -0.7
PCM1-216ENST00000522777 MPNDQ8N594 471 aa10.67□□□□□ -0.7
PCM1-216ENST00000522777 SIRT1Q96EB6 747 aa10.67□□□□□ -0.7
PCM1-216ENST00000522777 IVNS1ABPQ9Y6Y0 642 aa10.67□□□□□ -0.7
PCM1-216ENST00000522777 SIAH2O43255 324 aa10.66□□□□□ -0.7
PCM1-216ENST00000522777 SSFA2P28290 1259 aa10.66□□□□□ -0.7
PCM1-216ENST00000522777 GRM5P41594 1212 aa10.66□□□□□ -0.7
PCM1-216ENST00000522777 TPCN2Q8NHX9 752 aa10.66□□□□□ -0.7
PCM1-216ENST00000522777 GNEQ9Y223 722 aaKnown RBP10.66□□□□□ -0.7
PCM1-216ENST00000522777 PRDM2Q13029 1718 aa10.65□□□□□ -0.7
PCM1-216ENST00000522777 FSHRP23945 695 aa10.65□□□□□ -0.7
PCM1-216ENST00000522777 ERVK-9P63128 1117 aa10.65□□□□□ -0.7
PCM1-216ENST00000522777 CCDC102BQ68D86 513 aa10.65□□□□□ -0.7
PCM1-216ENST00000522777 DNMBPQ6XZF7 1577 aa10.65□□□□□ -0.71
PCM1-216ENST00000522777 CHMP7Q8WUX9 453 aaPredicted RBP10.64□□□□□ -0.71
PCM1-216ENST00000522777 TARBP1Q13395 1621 aaKnown RBP10.63□□□□□ -0.71
PCM1-216ENST00000522777 SFI1A8K8P3 1242 aa10.63□□□□□ -0.71
PCM1-216ENST00000522777 WNT7AO00755 349 aa10.63□□□□□ -0.71
PCM1-216ENST00000522777 SEC13P55735 322 aa10.63□□□□□ -0.71
PCM1-216ENST00000522777 ARID5BQ14865 1188 aa10.63□□□□□ -0.71
PCM1-216ENST00000522777 TMCO4Q5TGY1 634 aa10.63□□□□□ -0.71
PCM1-216ENST00000522777 TXNDC2Q86VQ3 553 aa10.63□□□□□ -0.71
PCM1-216ENST00000522777 CCDC88BA6NC98 1476 aa10.62□□□□□ -0.71
PCM1-216ENST00000522777 MYCP01106 439 aaPredicted RBP10.62□□□□□ -0.71
PCM1-216ENST00000522777 PSME1Q06323 249 aa10.62□□□□□ -0.71
PCM1-216ENST00000522777 TDRD9Q8NDG6 1382 aaKnown RBP10.62□□□□□ -0.71
PCM1-216ENST00000522777 ADH1CP00326 375 aa10.61□□□□□ -0.71
PCM1-216ENST00000522777 ATP2B4P23634 1241 aa10.61□□□□□ -0.71
PCM1-216ENST00000522777 SLC19A1P41440 591 aa10.61□□□□□ -0.71
PCM1-216ENST00000522777 OCLNQ16625 522 aa10.61□□□□□ -0.71
PCM1-216ENST00000522777 CC2D2BQ6DHV5 1058 aa10.61□□□□□ -0.71
PCM1-216ENST00000522777 OSBPL3Q9H4L5 887 aa10.61□□□□□ -0.71
PCM1-216ENST00000522777 TMPRSS4Q9NRS4 437 aa10.61□□□□□ -0.71
PCM1-216ENST00000522777 CLASP1Q7Z460 1538 aa10.6□□□□□ -0.71
PCM1-216ENST00000522777 ZNF784Q8NCA9 323 aaPredicted RBP10.6□□□□□ -0.71
PCM1-216ENST00000522777 MRGPRX2Q96LB1 330 aa10.6□□□□□ -0.71
PCM1-216ENST00000522777 POLA1P09884 1462 aaPredicted RBP10.6□□□□□ -0.71
PCM1-216ENST00000522777 SYNJ1O43426 1573 aa10.6□□□□□ -0.71
PCM1-216ENST00000522777 LILRA1O75019 489 aa10.59□□□□□ -0.71
PCM1-216ENST00000522777 DHX9Q08211 1270 aaKnown RBP10.59□□□□□ -0.71
PCM1-216ENST00000522777 SPRYD7Q5W111 196 aa10.59□□□□□ -0.71
PCM1-216ENST00000522777 CYLDQ9NQC7 956 aa10.59□□□□□ -0.71
PCM1-216ENST00000522777 SNAPC4Q5SXM2 1469 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms