RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 SBF2Q86WG5 1849 aa16.12■□□□□ 0.17
CSMD1-210ENST00000521646 RGL2O15211 777 aa16.12■□□□□ 0.17
CSMD1-210ENST00000521646 TCP11L2Q8N4U5 519 aa16.12■□□□□ 0.17
CSMD1-210ENST00000521646 AXIN2Q9Y2T1 843 aa16.12■□□□□ 0.17
CSMD1-210ENST00000521646 CENPJQ9HC77 1338 aaPredicted RBP16.12■□□□□ 0.17
CSMD1-210ENST00000521646 WNK3Q9BYP7 1800 aa16.12■□□□□ 0.17
CSMD1-210ENST00000521646 RGPD5Q99666 1765 aa16.11■□□□□ 0.17
CSMD1-210ENST00000521646 EFCAB3Q8N7B9 438 aa16.11■□□□□ 0.17
CSMD1-210ENST00000521646 CABP1Q9NZU7 370 aa16.11■□□□□ 0.17
CSMD1-210ENST00000521646 TRPM1Q7Z4N2 1603 aa16.11■□□□□ 0.17
CSMD1-210ENST00000521646 EVA1CP58658 441 aa16.1■□□□□ 0.17
CSMD1-210ENST00000521646 SRPK2P78362 688 aaKnown RBP16.1■□□□□ 0.17
CSMD1-210ENST00000521646 UTRNP46939 3433 aa16.09■□□□□ 0.17
CSMD1-210ENST00000521646 L3MBTL2Q969R5 705 aa16.09■□□□□ 0.17
CSMD1-210ENST00000521646 CRB1P82279 1406 aa16.09■□□□□ 0.17
CSMD1-210ENST00000521646 PDCD7Q8N8D1 485 aaKnown RBP16.08■□□□□ 0.16
CSMD1-210ENST00000521646 SIN3AQ96ST3 1273 aa16.08■□□□□ 0.16
CSMD1-210ENST00000521646 PDGFDQ9GZP0 370 aaPredicted RBP16.08■□□□□ 0.16
CSMD1-210ENST00000521646 ANO8Q9HCE9 1232 aaPredicted RBP16.08■□□□□ 0.16
CSMD1-210ENST00000521646 AKAP12Q02952 1782 aa16.08■□□□□ 0.16
CSMD1-210ENST00000521646 PDE3BQ13370 1112 aa16.07■□□□□ 0.16
CSMD1-210ENST00000521646 AATKQ6ZMQ8 1374 aa16.07■□□□□ 0.16
CSMD1-210ENST00000521646 PARD3Q8TEW0 1356 aa16.07■□□□□ 0.16
CSMD1-210ENST00000521646 NFAT5O94916 1531 aa16.06■□□□□ 0.16
CSMD1-210ENST00000521646 ZBTB7CA1YPR0 619 aa16.06■□□□□ 0.16
CSMD1-210ENST00000521646 NLRP13Q86W25 1043 aa16.06■□□□□ 0.16
CSMD1-210ENST00000521646 CASZ1Q86V15 1759 aa16.05■□□□□ 0.16
CSMD1-210ENST00000521646 NLRP6P59044 892 aa16.05■□□□□ 0.16
CSMD1-210ENST00000521646 L3MBTL3Q96JM7 780 aaPredicted RBP16.05■□□□□ 0.16
CSMD1-210ENST00000521646 BCL11BQ9C0K0 894 aaPredicted RBP16.05■□□□□ 0.16
CSMD1-210ENST00000521646 STK24Q9Y6E0 443 aa16.05■□□□□ 0.16
CSMD1-210ENST00000521646 CPSF1Q10570 1443 aaKnown RBP16.04■□□□□ 0.16
CSMD1-210ENST00000521646 MARCH10Q8NA82 808 aaPredicted RBP16.04■□□□□ 0.16
CSMD1-210ENST00000521646 THRAP3Q9Y2W1 955 aaKnown RBP16.04■□□□□ 0.16
CSMD1-210ENST00000521646 RGPD3A6NKT7 1758 aaPredicted RBP16.03■□□□□ 0.16
CSMD1-210ENST00000521646 RGPD4Q7Z3J3 1758 aa16.03■□□□□ 0.16
CSMD1-210ENST00000521646 STK25O00506 426 aa16.03■□□□□ 0.16
CSMD1-210ENST00000521646 OVOS2A0A0G2JMS6 1433 aa16.02■□□□□ 0.16
CSMD1-210ENST00000521646 OVOS2A0A0J9YW53 1432 aa16.02■□□□□ 0.16
CSMD1-210ENST00000521646 OVOS2Q6IE36 1432 aa16.02■□□□□ 0.16
CSMD1-210ENST00000521646 TTC21BQ7Z4L5 1316 aa16.02■□□□□ 0.16
CSMD1-210ENST00000521646 DPY19L2Q6NUT2 758 aa16.02■□□□□ 0.16
CSMD1-210ENST00000521646 ARHGEF25Q86VW2 580 aa16.02■□□□□ 0.16
CSMD1-210ENST00000521646 CD163L1Q9NR16 1453 aa16.02■□□□□ 0.15
CSMD1-210ENST00000521646 BRD4O60885 1362 aaPredicted RBP16■□□□□ 0.15
CSMD1-210ENST00000521646 WDR17Q8IZU2 1322 aa16■□□□□ 0.15
CSMD1-210ENST00000521646 MON2Q7Z3U7 1717 aa16■□□□□ 0.15
CSMD1-210ENST00000521646 SOX12O15370 315 aa16■□□□□ 0.15
CSMD1-210ENST00000521646 SLAIN1Q8ND83 568 aa15.99■□□□□ 0.15
CSMD1-210ENST00000521646 G3V3G9 751 aa15.98■□□□□ 0.15
CSMD1-210ENST00000521646 TOM1L2Q6ZVM7 507 aa15.98■□□□□ 0.15
CSMD1-210ENST00000521646 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.98■□□□□ 0.15
CSMD1-210ENST00000521646 BCL9O00512 1426 aa15.97■□□□□ 0.15
CSMD1-210ENST00000521646 DDB1Q16531 1140 aa15.97■□□□□ 0.15
CSMD1-210ENST00000521646 MYOM1P52179 1685 aa15.97■□□□□ 0.15
CSMD1-210ENST00000521646 USP54Q70EL1 1684 aa15.97■□□□□ 0.15
CSMD1-210ENST00000521646 EVC2Q86UK5 1308 aa15.96■□□□□ 0.15
CSMD1-210ENST00000521646 PLSCR1O15162 318 aa15.96■□□□□ 0.15
CSMD1-210ENST00000521646 KCNQ2O43526 872 aa15.96■□□□□ 0.15
CSMD1-210ENST00000521646 ROCK2O75116 1388 aaKnown RBP15.95■□□□□ 0.14
CSMD1-210ENST00000521646 SBNO2Q9Y2G9 1366 aa15.95■□□□□ 0.14
CSMD1-210ENST00000521646 NEUROD1Q13562 356 aa15.94■□□□□ 0.14
CSMD1-210ENST00000521646 C3orf67Q6ZVT6 689 aa15.94■□□□□ 0.14
CSMD1-210ENST00000521646 CARD10Q9BWT7 1032 aa15.94■□□□□ 0.14
CSMD1-210ENST00000521646 PAPPAQ13219 1627 aa15.94■□□□□ 0.14
CSMD1-210ENST00000521646 PTGER2P43116 358 aa15.93■□□□□ 0.14
CSMD1-210ENST00000521646 NBPF14Q5TI25 921 aa15.93■□□□□ 0.14
CSMD1-210ENST00000521646 NME9Q86XW9 330 aa15.93■□□□□ 0.14
CSMD1-210ENST00000521646 LTN1O94822 1766 aa15.92■□□□□ 0.14
CSMD1-210ENST00000521646 NHSQ6T4R5 1651 aa15.92■□□□□ 0.14
CSMD1-210ENST00000521646 GOLGB1Q14789 3259 aaKnown RBP15.92■□□□□ 0.14
CSMD1-210ENST00000521646 KTN1Q86UP2 1357 aaKnown RBP15.92■□□□□ 0.14
CSMD1-210ENST00000521646 SPON1Q9HCB6 807 aa15.92■□□□□ 0.14
CSMD1-210ENST00000521646 TNS2Q63HR2 1409 aa15.92■□□□□ 0.14
CSMD1-210ENST00000521646 ZBTB7AO95365 584 aa15.91■□□□□ 0.14
CSMD1-210ENST00000521646 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.91■□□□□ 0.14
CSMD1-210ENST00000521646 TTC21AQ8NDW8 1320 aa15.91■□□□□ 0.14
CSMD1-210ENST00000521646 USP31Q70CQ4 1352 aa15.9■□□□□ 0.14
CSMD1-210ENST00000521646 TXNRD1Q16881 649 aa15.9■□□□□ 0.14
CSMD1-210ENST00000521646 BOLA1Q9Y3E2 137 aa15.9■□□□□ 0.14
CSMD1-210ENST00000521646 ABCC6O95255 1503 aa15.89■□□□□ 0.13
CSMD1-210ENST00000521646 FAM163AQ96GL9 167 aaPredicted RBP15.89■□□□□ 0.13
CSMD1-210ENST00000521646 ERBB3P21860 1342 aa15.89■□□□□ 0.13
CSMD1-210ENST00000521646 NINLQ9Y2I6 1382 aa15.88■□□□□ 0.13
CSMD1-210ENST00000521646 YY1P25490 414 aa15.88■□□□□ 0.13
CSMD1-210ENST00000521646 KCNH5Q8NCM2 988 aa15.88■□□□□ 0.13
CSMD1-210ENST00000521646 ACSBG1Q96GR2 724 aa15.88■□□□□ 0.13
CSMD1-210ENST00000521646 SLC12A5Q9H2X9 1139 aa15.88■□□□□ 0.13
CSMD1-210ENST00000521646 BTAF1O14981 1849 aa15.88■□□□□ 0.13
CSMD1-210ENST00000521646 CSB-PGBD3P0DP91 1061 aa15.87■□□□□ 0.13
CSMD1-210ENST00000521646 FBLN1P23142 703 aa15.86■□□□□ 0.13
CSMD1-210ENST00000521646 A0A1W2PP64 1363 aa15.86■□□□□ 0.13
CSMD1-210ENST00000521646 CCDC7Q96M83 1385 aa15.86■□□□□ 0.13
CSMD1-210ENST00000521646 SLC15A2Q16348 729 aa15.85■□□□□ 0.13
CSMD1-210ENST00000521646 ZNF827Q17R98 1081 aa15.85■□□□□ 0.13
CSMD1-210ENST00000521646 CDCA7Q9BWT1 371 aaPredicted RBP15.85■□□□□ 0.13
CSMD1-210ENST00000521646 LRRC4BQ9NT99 713 aa15.85■□□□□ 0.13
CSMD1-210ENST00000521646 PPP1R1BQ9UD71 204 aaPredicted RBP15.85■□□□□ 0.13
CSMD1-210ENST00000521646 SHANK3Q9BYB0 1731 aa15.85■□□□□ 0.13
CSMD1-210ENST00000521646 FAM208AQ9UK61 1670 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms