RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 FAM98CQ17RN3 349 aaKnown RBP14.18□□□□□ -0.14
TRIM35-204ENST00000521283 IER5LQ5T953 404 aa14.18□□□□□ -0.14
TRIM35-204ENST00000521283 ARHGEF25Q86VW2 580 aa14.18□□□□□ -0.14
TRIM35-204ENST00000521283 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.18□□□□□ -0.14
TRIM35-204ENST00000521283 SF3B2Q13435 895 aaKnown RBP14.17□□□□□ -0.14
TRIM35-204ENST00000521283 TCP11L2Q8N4U5 519 aa14.17□□□□□ -0.14
TRIM35-204ENST00000521283 COL5A2P05997 1499 aaPredicted RBP14.17□□□□□ -0.14
TRIM35-204ENST00000521283 CRB1P82279 1406 aa14.16□□□□□ -0.14
TRIM35-204ENST00000521283 CDCA7Q9BWT1 371 aaPredicted RBP14.16□□□□□ -0.14
TRIM35-204ENST00000521283 CIZ1Q9ULV3 898 aaPredicted RBP14.16□□□□□ -0.14
TRIM35-204ENST00000521283 BLMP54132 1417 aaPredicted RBP14.15□□□□□ -0.14
TRIM35-204ENST00000521283 COL18A1P39060 1754 aa14.15□□□□□ -0.14
TRIM35-204ENST00000521283 THSD7AQ9UPZ6 1657 aa14.15□□□□□ -0.14
TRIM35-204ENST00000521283 COG3Q96JB2 828 aa14.15□□□□□ -0.14
TRIM35-204ENST00000521283 NFAT5O94916 1531 aa14.15□□□□□ -0.14
TRIM35-204ENST00000521283 WDR17Q8IZU2 1322 aa14.15□□□□□ -0.15
TRIM35-204ENST00000521283 SEC24BO95487 1268 aa14.14□□□□□ -0.15
TRIM35-204ENST00000521283 LARP1Q6PKG0 1096 aaKnown RBP14.14□□□□□ -0.15
TRIM35-204ENST00000521283 ZNF467Q7Z7K2 595 aaPredicted RBP14.14□□□□□ -0.15
TRIM35-204ENST00000521283 EP400Q96L91 3159 aa14.13□□□□□ -0.15
TRIM35-204ENST00000521283 PDE3BQ13370 1112 aa14.13□□□□□ -0.15
TRIM35-204ENST00000521283 TOM1L2Q6ZVM7 507 aa14.13□□□□□ -0.15
TRIM35-204ENST00000521283 NME9Q86XW9 330 aa14.13□□□□□ -0.15
TRIM35-204ENST00000521283 OVOS2A0A0J9YW53 1432 aa14.13□□□□□ -0.15
TRIM35-204ENST00000521283 OVOS2Q6IE36 1432 aa14.13□□□□□ -0.15
TRIM35-204ENST00000521283 ZBTB7CA1YPR0 619 aa14.12□□□□□ -0.15
TRIM35-204ENST00000521283 FAM196AQ6ZSG2 479 aa14.12□□□□□ -0.15
TRIM35-204ENST00000521283 CARD10Q9BWT7 1032 aa14.12□□□□□ -0.15
TRIM35-204ENST00000521283 LTN1O94822 1766 aa14.11□□□□□ -0.15
TRIM35-204ENST00000521283 USP35Q9P2H5 1018 aa14.11□□□□□ -0.15
TRIM35-204ENST00000521283 CCDC7Q96M83 1385 aa14.1□□□□□ -0.15
TRIM35-204ENST00000521283 PARP4Q9UKK3 1724 aaKnown RBP14.1□□□□□ -0.15
TRIM35-204ENST00000521283 RGPD5Q99666 1765 aa14.1□□□□□ -0.15
TRIM35-204ENST00000521283 CSB-PGBD3P0DP91 1061 aa14.1□□□□□ -0.15
TRIM35-204ENST00000521283 MAMSTRQ6ZN01 415 aa14.1□□□□□ -0.15
TRIM35-204ENST00000521283 AXIN2Q9Y2T1 843 aa14.1□□□□□ -0.15
TRIM35-204ENST00000521283 SOX12O15370 315 aa14.09□□□□□ -0.15
TRIM35-204ENST00000521283 IRX5P78411 483 aaPredicted RBP14.09□□□□□ -0.15
TRIM35-204ENST00000521283 RGPD1P0DJD0 1748 aa14.09□□□□□ -0.15
TRIM35-204ENST00000521283 FYB1O15117 783 aa14.08□□□□□ -0.16
TRIM35-204ENST00000521283 BAG6P46379 1132 aa14.08□□□□□ -0.16
TRIM35-204ENST00000521283 IP6K1Q92551 441 aa14.08□□□□□ -0.16
TRIM35-204ENST00000521283 KIF24Q5T7B8 1368 aa14.08□□□□□ -0.16
TRIM35-204ENST00000521283 FAM208AQ9UK61 1670 aaKnown RBP14.07□□□□□ -0.16
TRIM35-204ENST00000521283 KIF20BQ96Q89 1820 aa14.07□□□□□ -0.16
TRIM35-204ENST00000521283 HSPA5P11021 654 aaKnown RBP14.07□□□□□ -0.16
TRIM35-204ENST00000521283 DDB1Q16531 1140 aa14.07□□□□□ -0.16
TRIM35-204ENST00000521283 ERBB3P21860 1342 aa14.07□□□□□ -0.16
TRIM35-204ENST00000521283 MYOM1P52179 1685 aa14.07□□□□□ -0.16
TRIM35-204ENST00000521283 RTL1A6NKG5 1358 aa14.07□□□□□ -0.16
TRIM35-204ENST00000521283 CGNL1Q0VF96 1302 aa14.06□□□□□ -0.16
TRIM35-204ENST00000521283 AMPHP49418 695 aa14.05□□□□□ -0.16
TRIM35-204ENST00000521283 WNK3Q9BYP7 1800 aa14.05□□□□□ -0.16
TRIM35-204ENST00000521283 EXOC5O00471 708 aa14.04□□□□□ -0.16
TRIM35-204ENST00000521283 PSEN1P49768 467 aa14.04□□□□□ -0.16
TRIM35-204ENST00000521283 ANKRD24Q8TF21 1146 aa14.04□□□□□ -0.16
TRIM35-204ENST00000521283 PARD3Q8TEW0 1356 aa14.04□□□□□ -0.16
TRIM35-204ENST00000521283 DISP2A7MBM2 1401 aa14.04□□□□□ -0.16
TRIM35-204ENST00000521283 SCUBE2Q9NQ36 999 aa14.03□□□□□ -0.16
TRIM35-204ENST00000521283 NLRP2Q9NX02 1062 aa14.03□□□□□ -0.16
TRIM35-204ENST00000521283 OVOS2A0A0G2JMS6 1433 aa14.03□□□□□ -0.16
TRIM35-204ENST00000521283 BCL9O00512 1426 aa14.03□□□□□ -0.16
TRIM35-204ENST00000521283 NSD3Q9BZ95 1437 aa14.03□□□□□ -0.16
TRIM35-204ENST00000521283 SMG6Q86US8 1419 aaKnown RBP14.02□□□□□ -0.16
TRIM35-204ENST00000521283 MAP3K19Q56UN5 1328 aa14.02□□□□□ -0.17
TRIM35-204ENST00000521283 PLCG2P16885 1265 aa14.02□□□□□ -0.17
TRIM35-204ENST00000521283 CARD14Q9BXL6 1004 aa14.02□□□□□ -0.17
TRIM35-204ENST00000521283 GGNBP2Q9H3C7 697 aa14.02□□□□□ -0.17
TRIM35-204ENST00000521283 NSD2O96028 1365 aa14.01□□□□□ -0.17
TRIM35-204ENST00000521283 IL2RBP14784 551 aa14.01□□□□□ -0.17
TRIM35-204ENST00000521283 HOXC9P31274 260 aa14.01□□□□□ -0.17
TRIM35-204ENST00000521283 LRRC37A3O60309 1634 aa14.01□□□□□ -0.17
TRIM35-204ENST00000521283 POLR3GLQ9BT43 218 aa14□□□□□ -0.17
TRIM35-204ENST00000521283 FLT4P35916 1363 aa13.99□□□□□ -0.17
TRIM35-204ENST00000521283 PDAP1Q13442 181 aaKnown RBP13.99□□□□□ -0.17
TRIM35-204ENST00000521283 OCEL1Q9H607 264 aa13.99□□□□□ -0.17
TRIM35-204ENST00000521283 TNS1Q9HBL0 1735 aaKnown RBP13.98□□□□□ -0.17
TRIM35-204ENST00000521283 ANKRD26Q9UPS8 1709 aa13.98□□□□□ -0.17
TRIM35-204ENST00000521283 INSRP06213 1382 aa13.98□□□□□ -0.17
TRIM35-204ENST00000521283 TRIM37O94972 964 aa13.98□□□□□ -0.17
TRIM35-204ENST00000521283 DEFB132Q7Z7B7 95 aa13.98□□□□□ -0.17
TRIM35-204ENST00000521283 TNS2Q63HR2 1409 aa13.98□□□□□ -0.17
TRIM35-204ENST00000521283 MAP2P11137 1827 aaKnown RBP13.97□□□□□ -0.17
TRIM35-204ENST00000521283 SBF2Q86WG5 1849 aa13.97□□□□□ -0.17
TRIM35-204ENST00000521283 APBA3O96018 575 aa13.97□□□□□ -0.17
TRIM35-204ENST00000521283 FAM182BQ5T319 152 aa13.97□□□□□ -0.17
TRIM35-204ENST00000521283 BCL11BQ9C0K0 894 aaPredicted RBP13.97□□□□□ -0.17
TRIM35-204ENST00000521283 PANK3Q9H999 370 aa13.97□□□□□ -0.17
TRIM35-204ENST00000521283 KNSTRNQ9Y448 316 aa13.97□□□□□ -0.17
TRIM35-204ENST00000521283 PEAK1Q9H792 1746 aa13.97□□□□□ -0.17
TRIM35-204ENST00000521283 RGPD3A6NKT7 1758 aaPredicted RBP13.96□□□□□ -0.17
TRIM35-204ENST00000521283 RGPD4Q7Z3J3 1758 aa13.96□□□□□ -0.17
TRIM35-204ENST00000521283 PLSCR1O15162 318 aa13.96□□□□□ -0.17
TRIM35-204ENST00000521283 RRS1Q15050 365 aaKnown RBP13.96□□□□□ -0.17
TRIM35-204ENST00000521283 MARCH10Q8NA82 808 aaPredicted RBP13.95□□□□□ -0.18
TRIM35-204ENST00000521283 WASHC2AQ641Q2 1341 aa13.94□□□□□ -0.18
TRIM35-204ENST00000521283 EN1Q05925 392 aaPredicted RBP13.94□□□□□ -0.18
TRIM35-204ENST00000521283 LTV1Q96GA3 475 aaPredicted RBP13.94□□□□□ -0.18
TRIM35-204ENST00000521283 CAMKK2Q96RR4 588 aa13.94□□□□□ -0.18
TRIM35-204ENST00000521283 HMGB2P26583 209 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms