RNA–Protein interactions for RNA: ENST00000520549.1

IRGM-201, Transcript of immunity related GTPase M, humanhuman

TSL 1 (best)

Gene IRGM, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRGM-201ENST00000520549 TRIM52Q96A61 297 aa12.51□□□□□ -0.41
IRGM-201ENST00000520549 GMCL1Q96IK5 515 aa12.51□□□□□ -0.41
IRGM-201ENST00000520549 MBIPQ9NS73 344 aa12.51□□□□□ -0.41
IRGM-201ENST00000520549 RNF144AP50876 292 aaPredicted RBP12.5□□□□□ -0.41
IRGM-201ENST00000520549 FOXR1Q6PIV2 292 aa12.5□□□□□ -0.41
IRGM-201ENST00000520549 ZNF837Q96EG3 531 aaPredicted RBP12.5□□□□□ -0.41
IRGM-201ENST00000520549 CYLDQ9NQC7 956 aa12.5□□□□□ -0.41
IRGM-201ENST00000520549 SEPT12Q8IYM1 358 aa12.49□□□□□ -0.41
IRGM-201ENST00000520549 PHF20L1A8MW92 1017 aa12.48□□□□□ -0.41
IRGM-201ENST00000520549 TRIM22Q8IYM9 498 aa12.48□□□□□ -0.41
IRGM-201ENST00000520549 HMX1Q9NP08 348 aaPredicted RBP12.48□□□□□ -0.41
IRGM-201ENST00000520549 GPR25O00155 361 aa12.47□□□□□ -0.41
IRGM-201ENST00000520549 IGF1RP08069 1367 aa12.46□□□□□ -0.41
IRGM-201ENST00000520549 CNTNAP5Q8WYK1 1306 aa12.46□□□□□ -0.41
IRGM-201ENST00000520549 ATP5J2-PTCD1G3V325 749 aa12.46□□□□□ -0.41
IRGM-201ENST00000520549 USP17L8P0C7I0 530 aa12.46□□□□□ -0.41
IRGM-201ENST00000520549 RIPOR1Q6ZS17 1223 aa12.46□□□□□ -0.41
IRGM-201ENST00000520549 PLA2G4EQ3MJ16 856 aa12.45□□□□□ -0.42
IRGM-201ENST00000520549 PODNQ7Z5L7 613 aa12.45□□□□□ -0.42
IRGM-201ENST00000520549 MSTNO14793 375 aa12.44□□□□□ -0.42
IRGM-201ENST00000520549 DBN1Q16643 649 aa12.44□□□□□ -0.42
IRGM-201ENST00000520549 NEDD1Q8NHV4 660 aa12.44□□□□□ -0.42
IRGM-201ENST00000520549 DDRGK1Q96HY6 314 aa12.44□□□□□ -0.42
IRGM-201ENST00000520549 BCRP11274 1271 aa12.43□□□□□ -0.42
IRGM-201ENST00000520549 GPC1P35052 558 aa12.43□□□□□ -0.42
IRGM-201ENST00000520549 BEND7Q8N7W2 519 aaPredicted RBP12.43□□□□□ -0.42
IRGM-201ENST00000520549 DCAF5Q96JK2 942 aa12.43□□□□□ -0.42
IRGM-201ENST00000520549 H7C1W4 665 aa12.42□□□□□ -0.42
IRGM-201ENST00000520549 MEN1O00255 615 aa12.42□□□□□ -0.42
IRGM-201ENST00000520549 GTPBP3Q969Y2 492 aaKnown RBP12.41□□□□□ -0.42
IRGM-201ENST00000520549 FAM117AQ9C073 453 aa12.41□□□□□ -0.42
IRGM-201ENST00000520549 DYRK1BQ9Y463 629 aa12.41□□□□□ -0.42
IRGM-201ENST00000520549 TRERF1Q96PN7 1200 aa12.4□□□□□ -0.42
IRGM-201ENST00000520549 SPOCK3Q9BQ16 436 aa12.4□□□□□ -0.42
IRGM-201ENST00000520549 KDM4CQ9H3R0 1056 aa12.4□□□□□ -0.42
IRGM-201ENST00000520549 GAS2L1Q99501 681 aaPredicted RBP12.39□□□□□ -0.43
IRGM-201ENST00000520549 GPBP1L1Q9HC44 474 aaPredicted RBP12.39□□□□□ -0.43
IRGM-201ENST00000520549 A0A1W2PRU2 124 aa12.38□□□□□ -0.43
IRGM-201ENST00000520549 ADAM23O75077 832 aa12.38□□□□□ -0.43
IRGM-201ENST00000520549 GIGYF1O75420 1035 aaPredicted RBP12.38□□□□□ -0.43
IRGM-201ENST00000520549 SLC27A3Q5K4L6 730 aa12.38□□□□□ -0.43
IRGM-201ENST00000520549 ACDQ96AP0 544 aa12.38□□□□□ -0.43
IRGM-201ENST00000520549 RFC5P40937 340 aa12.36□□□□□ -0.43
IRGM-201ENST00000520549 POU4F2Q12837 409 aa12.36□□□□□ -0.43
IRGM-201ENST00000520549 NLRP3Q96P20 1036 aa12.36□□□□□ -0.43
IRGM-201ENST00000520549 NSFL1CQ9UNZ2 370 aaKnown RBP12.36□□□□□ -0.43
IRGM-201ENST00000520549 PCDHB9Q9Y5E1 797 aa12.36□□□□□ -0.43
IRGM-201ENST00000520549 ITGB2P05107 769 aa12.35□□□□□ -0.43
IRGM-201ENST00000520549 MX2P20592 715 aa12.35□□□□□ -0.43
IRGM-201ENST00000520549 CC2D2BQ6DHV5 1058 aa12.35□□□□□ -0.43
IRGM-201ENST00000520549 LRRC4BQ9NT99 713 aa12.35□□□□□ -0.43
IRGM-201ENST00000520549 ZBBXA8MT70 800 aa12.34□□□□□ -0.43
IRGM-201ENST00000520549 ERVK-9P63128 1117 aa12.34□□□□□ -0.43
IRGM-201ENST00000520549 CCDC125Q86Z20 511 aa12.34□□□□□ -0.43
IRGM-201ENST00000520549 GALNT6Q8NCL4 622 aa12.34□□□□□ -0.43
IRGM-201ENST00000520549 NBPF10Q6P3W6 841 aaKnown RBP12.33□□□□□ -0.44
IRGM-201ENST00000520549 NBPF15Q8N660 670 aa12.33□□□□□ -0.44
IRGM-201ENST00000520549 TRIM34Q9BYJ4 488 aa12.33□□□□□ -0.44
IRGM-201ENST00000520549 PROCP04070 461 aa12.31□□□□□ -0.44
IRGM-201ENST00000520549 XP32Q5T750 250 aa12.31□□□□□ -0.44
IRGM-201ENST00000520549 GRIP2Q9C0E4 1043 aa12.31□□□□□ -0.44
IRGM-201ENST00000520549 NUCKS1Q9H1E3 243 aaKnown RBP12.31□□□□□ -0.44
IRGM-201ENST00000520549 RNF20Q5VTR2 975 aa12.3□□□□□ -0.44
IRGM-201ENST00000520549 CYP2U1Q7Z449 544 aa12.3□□□□□ -0.44
IRGM-201ENST00000520549 OIP5O43482 229 aa12.29□□□□□ -0.44
IRGM-201ENST00000520549 CLN3Q13286 438 aa12.29□□□□□ -0.44
IRGM-201ENST00000520549 TIMMDC1Q9NPL8 285 aa12.29□□□□□ -0.44
IRGM-201ENST00000520549 SPATA31C2B4DYI2 1134 aa12.28□□□□□ -0.44
IRGM-201ENST00000520549 FBXO45P0C2W1 286 aa12.28□□□□□ -0.44
IRGM-201ENST00000520549 WDR44Q5JSH3 913 aa12.28□□□□□ -0.44
IRGM-201ENST00000520549 F11P03951 625 aa12.27□□□□□ -0.45
IRGM-201ENST00000520549 MAP2K3P46734 347 aa12.27□□□□□ -0.45
IRGM-201ENST00000520549 TAS1R3Q7RTX0 852 aa12.27□□□□□ -0.45
IRGM-201ENST00000520549 OXCT2Q9BYC2 517 aaPredicted RBP12.27□□□□□ -0.45
IRGM-201ENST00000520549 WASLO00401 505 aaPredicted RBP12.26□□□□□ -0.45
IRGM-201ENST00000520549 ARHGEF10LQ9HCE6 1279 aa12.26□□□□□ -0.45
IRGM-201ENST00000520549 SCTRP47872 440 aa12.25□□□□□ -0.45
IRGM-201ENST00000520549 TMEM259Q4ZIN3 620 aa12.24□□□□□ -0.45
IRGM-201ENST00000520549 CFHR5Q9BXR6 569 aa12.24□□□□□ -0.45
IRGM-201ENST00000520549 ESF1Q9H501 851 aaKnown RBP12.24□□□□□ -0.45
IRGM-201ENST00000520549 SNRPNP63162 240 aaKnown RBP12.23□□□□□ -0.45
IRGM-201ENST00000520549 PCDHB11Q9Y5F2 797 aa12.23□□□□□ -0.45
IRGM-201ENST00000520549 MCCD1P59942 119 aaPredicted RBP12.22□□□□□ -0.45
IRGM-201ENST00000520549 OSBPL3Q9H4L5 887 aa12.22□□□□□ -0.45
IRGM-201ENST00000520549 MKL2Q9ULH7 1088 aa12.22□□□□□ -0.45
IRGM-201ENST00000520549 K7ELQ4 463 aaPredicted RBP12.21□□□□□ -0.45
IRGM-201ENST00000520549 TRAK2O60296 914 aa12.21□□□□□ -0.45
IRGM-201ENST00000520549 ZNF592Q92610 1267 aa12.21□□□□□ -0.45
IRGM-201ENST00000520549 GJD4Q96KN9 370 aaPredicted RBP12.21□□□□□ -0.45
IRGM-201ENST00000520549 PCMTD1Q96MG8 357 aaPredicted RBP12.2□□□□□ -0.46
IRGM-201ENST00000520549 GPAMQ9HCL2 828 aa12.2□□□□□ -0.46
IRGM-201ENST00000520549 PHF24Q9UPV7 400 aa12.2□□□□□ -0.46
IRGM-201ENST00000520549 KRBA1A5PL33 1030 aa12.19□□□□□ -0.46
IRGM-201ENST00000520549 SHISA8B8ZZ34 492 aa12.19□□□□□ -0.46
IRGM-201ENST00000520549 THBS1P07996 1170 aa12.19□□□□□ -0.46
IRGM-201ENST00000520549 RAB6BQ9NRW1 208 aa12.19□□□□□ -0.46
IRGM-201ENST00000520549 BAG6P46379 1132 aa12.18□□□□□ -0.46
IRGM-201ENST00000520549 NR1H3Q13133 447 aa12.18□□□□□ -0.46
IRGM-201ENST00000520549 ALYREFQ86V81 257 aaKnown RBP12.18□□□□□ -0.46
IRGM-201ENST00000520549 KLRG1Q96E93 195 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms