RNA–Protein interactions for RNA: ENST00000520549.1

IRGM-201, Transcript of immunity related GTPase M, humanhuman

TSL 1 (best)

Gene IRGM, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRGM-201ENST00000520549 AEBP2Q6ZN18 517 aaPredicted RBP38.75■■■■□ 3.79
IRGM-201ENST00000520549 CHIC1Q5VXU3 224 aa36.61■■■■□ 3.45
IRGM-201ENST00000520549 SENP3Q9H4L4 574 aaPredicted RBP33.14■■■□□ 2.9
IRGM-201ENST00000520549 PHF23Q9BUL5 403 aaPredicted RBP32.66■■■□□ 2.82
IRGM-201ENST00000520549 FOXD1Q16676 465 aa30.88■■■□□ 2.53
IRGM-201ENST00000520549 PLPPR3Q6T4P5 718 aa29.19■■■□□ 2.26
IRGM-201ENST00000520549 MSH5O43196 834 aa29.03■■■□□ 2.24
IRGM-201ENST00000520549 PIAS4Q8N2W9 510 aaPredicted RBP28.84■■■□□ 2.21
IRGM-201ENST00000520549 PPP6R1Q9UPN7 881 aa28.69■■■□□ 2.18
IRGM-201ENST00000520549 POTEDQ86YR6 584 aa28.67■■■□□ 2.18
IRGM-201ENST00000520549 ADRA2BP18089 450 aa28.61■■■□□ 2.17
IRGM-201ENST00000520549 MAPK8IP2Q13387 824 aaPredicted RBP26.33■■□□□ 1.81
IRGM-201ENST00000520549 SCAF1Q9H7N4 1312 aaKnown RBP26.23■■□□□ 1.79
IRGM-201ENST00000520549 DMRT2Q9Y5R5 561 aa26.23■■□□□ 1.79
IRGM-201ENST00000520549 PPP4R3CPQ6ZMV5 832 aa25.54■■□□□ 1.68
IRGM-201ENST00000520549 DCAF8L1A6NGE4 600 aa25.22■■□□□ 1.63
IRGM-201ENST00000520549 HOXD11P31277 338 aaPredicted RBP25.17■■□□□ 1.62
IRGM-201ENST00000520549 CNKSR2Q8WXI2 1034 aa25.13■■□□□ 1.61
IRGM-201ENST00000520549 CACNB1Q02641 598 aaPredicted RBP25.04■■□□□ 1.6
IRGM-201ENST00000520549 RNF216Q9NWF9 866 aaPredicted RBP24.95■■□□□ 1.58
IRGM-201ENST00000520549 RNF39Q9H2S5 420 aa24.72■■□□□ 1.55
IRGM-201ENST00000520549 NCBP3Q53F19 620 aaKnown RBP24.53■■□□□ 1.52
IRGM-201ENST00000520549 C1QBPQ07021 282 aaKnown RBP24.36■■□□□ 1.49
IRGM-201ENST00000520549 DNAJC5BQ9UF47 199 aa24.35■■□□□ 1.49
IRGM-201ENST00000520549 NPM3O75607 178 aaKnown RBP24.14■■□□□ 1.45
IRGM-201ENST00000520549 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.03■■□□□ 1.44
IRGM-201ENST00000520549 KCNA4P22459 653 aa23.47■■□□□ 1.35
IRGM-201ENST00000520549 U3KPZ7 1027 aaPredicted RBP23.47■■□□□ 1.35
IRGM-201ENST00000520549 CAPN15O75808 1086 aa23.2■■□□□ 1.3
IRGM-201ENST00000520549 SPINK5Q9NQ38 1064 aaPredicted RBP23.19■■□□□ 1.3
IRGM-201ENST00000520549 SLC4A2P04920 1241 aa23.08■■□□□ 1.29
IRGM-201ENST00000520549 DSG3P32926 999 aa23.08■■□□□ 1.29
IRGM-201ENST00000520549 APLP2Q06481 763 aa22.86■■□□□ 1.25
IRGM-201ENST00000520549 TRHP20396 242 aaPredicted RBP22.78■■□□□ 1.24
IRGM-201ENST00000520549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.77■■□□□ 1.24
IRGM-201ENST00000520549 HNRNPUL2Q1KMD3 747 aaKnown RBP22.77■■□□□ 1.24
IRGM-201ENST00000520549 ZNF219Q9P2Y4 722 aaPredicted RBP22.73■■□□□ 1.23
IRGM-201ENST00000520549 ABCB7O75027 752 aa22.63■■□□□ 1.21
IRGM-201ENST00000520549 SAMD1Q6SPF0 538 aaPredicted RBP22.61■■□□□ 1.21
IRGM-201ENST00000520549 POTEHQ6S545 545 aa22.44■■□□□ 1.18
IRGM-201ENST00000520549 MYCNP04198 464 aaPredicted RBP22.36■■□□□ 1.17
IRGM-201ENST00000520549 SLC4A1APQ9BWU0 796 aaKnown RBP22.14■■□□□ 1.13
IRGM-201ENST00000520549 POLA2Q14181 598 aa22.1■■□□□ 1.13
IRGM-201ENST00000520549 RBM42Q9BTD8 480 aaKnown RBP22.07■■□□□ 1.12
IRGM-201ENST00000520549 FOXD4L1Q9NU39 408 aa22■■□□□ 1.11
IRGM-201ENST00000520549 ATF5Q9Y2D1 282 aaPredicted RBP21.81■■□□□ 1.08
IRGM-201ENST00000520549 ZBTB12Q9Y330 459 aaPredicted RBP21.65■■□□□ 1.06
IRGM-201ENST00000520549 CHRDL2Q6WN34 429 aa21.64■■□□□ 1.05
IRGM-201ENST00000520549 ZBTB22O15209 634 aa21.55■■□□□ 1.04
IRGM-201ENST00000520549 AKT1S1Q96B36 256 aa21.5■■□□□ 1.03
IRGM-201ENST00000520549 OSCARQ8IYS5 282 aa21.41■■□□□ 1.02
IRGM-201ENST00000520549 ATXN8OSP0DMR3 200 aa21.34■■□□□ 1.01
IRGM-201ENST00000520549 REM2Q8IYK8 340 aaPredicted RBP21.28■■□□□ 1
IRGM-201ENST00000520549 PIP4P2Q8N4L2 257 aa21.08■□□□□ 0.97
IRGM-201ENST00000520549 PITPNM1O00562 1244 aa21.06■□□□□ 0.96
IRGM-201ENST00000520549 FBLN2P98095 1184 aa21.04■□□□□ 0.96
IRGM-201ENST00000520549 SPDYE2BA6NHP3 402 aa20.95■□□□□ 0.94
IRGM-201ENST00000520549 SPDYE6P0CI01 402 aa20.95■□□□□ 0.94
IRGM-201ENST00000520549 SPDYE2Q495Y8 402 aa20.95■□□□□ 0.94
IRGM-201ENST00000520549 SP7Q8TDD2 431 aaPredicted RBP20.94■□□□□ 0.94
IRGM-201ENST00000520549 FXR2P51116 673 aaKnown RBP eCLIP20.91■□□□□ 0.94
IRGM-201ENST00000520549 MKRN4PQ13434 485 aaPredicted RBP20.79■□□□□ 0.92
IRGM-201ENST00000520549 HAX1O00165 279 aa20.78■□□□□ 0.92
IRGM-201ENST00000520549 ZNF692Q9BU19 519 aaPredicted RBP20.68■□□□□ 0.9
IRGM-201ENST00000520549 SPDYE1Q8NFV5 336 aaPredicted RBP20.65■□□□□ 0.9
IRGM-201ENST00000520549 CLEC11AQ9Y240 323 aa20.65■□□□□ 0.9
IRGM-201ENST00000520549 SSUH2Q9Y2M2 353 aa20.62■□□□□ 0.89
IRGM-201ENST00000520549 PRKAR2AP13861 404 aaKnown RBP20.53■□□□□ 0.88
IRGM-201ENST00000520549 EVX2Q03828 476 aa20.45■□□□□ 0.86
IRGM-201ENST00000520549 CSRNP3Q8WYN3 585 aa20.38■□□□□ 0.85
IRGM-201ENST00000520549 PABPN1Q86U42 306 aaKnown RBP eCLIP20.36■□□□□ 0.85
IRGM-201ENST00000520549 PRR29P0C7W0 189 aa20.27■□□□□ 0.84
IRGM-201ENST00000520549 C19orf67A6NJJ6 358 aa20.25■□□□□ 0.83
IRGM-201ENST00000520549 CHADLQ6NUI6 762 aa20.25■□□□□ 0.83
IRGM-201ENST00000520549 EHMT2Q96KQ7 1210 aa20.04■□□□□ 0.8
IRGM-201ENST00000520549 GABBR2O75899 941 aa20.01■□□□□ 0.79
IRGM-201ENST00000520549 FARP1Q9Y4F1 1045 aaPredicted RBP19.92■□□□□ 0.78
IRGM-201ENST00000520549 CD44P16070 742 aaKnown RBP19.87■□□□□ 0.77
IRGM-201ENST00000520549 STAG3Q9UJ98 1225 aa19.77■□□□□ 0.76
IRGM-201ENST00000520549 SPDYE4A6NLX3 237 aa19.75■□□□□ 0.75
IRGM-201ENST00000520549 CREBZFQ9NS37 354 aa19.67■□□□□ 0.74
IRGM-201ENST00000520549 CLCN6P51797 869 aa19.65■□□□□ 0.74
IRGM-201ENST00000520549 LHX8Q68G74 356 aa19.64■□□□□ 0.73
IRGM-201ENST00000520549 ZRANB1Q9UGI0 708 aa19.56■□□□□ 0.72
IRGM-201ENST00000520549 POTEIP0CG38 1075 aa19.55■□□□□ 0.72
IRGM-201ENST00000520549 ZNF579Q8NAF0 562 aaKnown RBP19.53■□□□□ 0.72
IRGM-201ENST00000520549 DCBLD2Q96PD2 775 aa19.47■□□□□ 0.71
IRGM-201ENST00000520549 PAK3O75914 559 aaPredicted RBP19.39■□□□□ 0.69
IRGM-201ENST00000520549 NPM1P06748 294 aaKnown RBP eCLIP19.35■□□□□ 0.69
IRGM-201ENST00000520549 GALR2O43603 387 aaPredicted RBP19.31■□□□□ 0.68
IRGM-201ENST00000520549 MNX1P50219 401 aaPredicted RBP19.28■□□□□ 0.68
IRGM-201ENST00000520549 PHF12Q96QT6 1004 aa19.25■□□□□ 0.67
IRGM-201ENST00000520549 PROM2Q8N271 834 aa19.18■□□□□ 0.66
IRGM-201ENST00000520549 MS4A3Q96HJ5 214 aa18.99■□□□□ 0.63
IRGM-201ENST00000520549 TSPYL2Q9H2G4 693 aaPredicted RBP18.98■□□□□ 0.63
IRGM-201ENST00000520549 PELP1Q8IZL8 1130 aaKnown RBP18.94■□□□□ 0.62
IRGM-201ENST00000520549 PLEKHG5O94827 1062 aa18.92■□□□□ 0.62
IRGM-201ENST00000520549 POTEB2H3BUK9 544 aa18.91■□□□□ 0.62
IRGM-201ENST00000520549 ASTLQ6HA08 431 aaPredicted RBP18.89■□□□□ 0.61
IRGM-201ENST00000520549 OTUD5Q96G74 571 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms