RNA–Protein interactions for RNA: ENST00000518504.5

SMN1-210, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5

Gene SMN1, Length 453 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-210ENST00000518504 FOXK2Q01167 660 aa9.15□□□□□ -0.94
SMN1-210ENST00000518504 PPP2R2DQ66LE6 453 aa9.15□□□□□ -0.94
SMN1-210ENST00000518504 SH3D19Q5HYK7 790 aa9.14□□□□□ -0.95
SMN1-210ENST00000518504 GPBP1L1Q9HC44 474 aaPredicted RBP9.14□□□□□ -0.95
SMN1-210ENST00000518504 IGF1RP08069 1367 aa9.13□□□□□ -0.95
SMN1-210ENST00000518504 ESPNB1AK53 854 aa9.13□□□□□ -0.95
SMN1-210ENST00000518504 MEN1O00255 615 aa9.13□□□□□ -0.95
SMN1-210ENST00000518504 USP17L8P0C7I0 530 aa9.13□□□□□ -0.95
SMN1-210ENST00000518504 DBN1Q16643 649 aa9.13□□□□□ -0.95
SMN1-210ENST00000518504 FAM117AQ9C073 453 aa9.13□□□□□ -0.95
SMN1-210ENST00000518504 ENAMQ9NRM1 1142 aa9.13□□□□□ -0.95
SMN1-210ENST00000518504 MBIPQ9NS73 344 aa9.13□□□□□ -0.95
SMN1-210ENST00000518504 RNF144AP50876 292 aaPredicted RBP9.12□□□□□ -0.95
SMN1-210ENST00000518504 PLA2G4EQ3MJ16 856 aa9.12□□□□□ -0.95
SMN1-210ENST00000518504 NEDD1Q8NHV4 660 aa9.12□□□□□ -0.95
SMN1-210ENST00000518504 GAS2L1Q99501 681 aaPredicted RBP9.12□□□□□ -0.95
SMN1-210ENST00000518504 TRIM22Q8IYM9 498 aa9.11□□□□□ -0.95
SMN1-210ENST00000518504 PNMA1Q8ND90 353 aa9.11□□□□□ -0.95
SMN1-210ENST00000518504 GTPBP3Q969Y2 492 aaKnown RBP9.11□□□□□ -0.95
SMN1-210ENST00000518504 DCAF5Q96JK2 942 aa9.11□□□□□ -0.95
SMN1-210ENST00000518504 ATP5J2-PTCD1G3V325 749 aa9.1□□□□□ -0.95
SMN1-210ENST00000518504 MSTNO14793 375 aa9.1□□□□□ -0.95
SMN1-210ENST00000518504 ITGB2P05107 769 aa9.1□□□□□ -0.95
SMN1-210ENST00000518504 GIGYF1O75420 1035 aaPredicted RBP9.09□□□□□ -0.95
SMN1-210ENST00000518504 POU4F2Q12837 409 aa9.09□□□□□ -0.95
SMN1-210ENST00000518504 FOXR1Q6PIV2 292 aa9.09□□□□□ -0.95
SMN1-210ENST00000518504 ACDQ96AP0 544 aa9.09□□□□□ -0.95
SMN1-210ENST00000518504 KDM4CQ9H3R0 1056 aa9.09□□□□□ -0.95
SMN1-210ENST00000518504 A0A1W2PRU2 124 aa9.08□□□□□ -0.96
SMN1-210ENST00000518504 PHF20L1A8MW92 1017 aa9.08□□□□□ -0.96
SMN1-210ENST00000518504 BCRP11274 1271 aa9.08□□□□□ -0.96
SMN1-210ENST00000518504 SPOCK3Q9BQ16 436 aa9.08□□□□□ -0.96
SMN1-210ENST00000518504 PCDHB9Q9Y5E1 797 aa9.08□□□□□ -0.96
SMN1-210ENST00000518504 SLC27A3Q5K4L6 730 aa9.07□□□□□ -0.96
SMN1-210ENST00000518504 PODNQ7Z5L7 613 aa9.06□□□□□ -0.96
SMN1-210ENST00000518504 SEPT12Q8IYM1 358 aa9.06□□□□□ -0.96
SMN1-210ENST00000518504 BEND7Q8N7W2 519 aaPredicted RBP9.06□□□□□ -0.96
SMN1-210ENST00000518504 ADAM23O75077 832 aa9.05□□□□□ -0.96
SMN1-210ENST00000518504 RFC5P40937 340 aa9.05□□□□□ -0.96
SMN1-210ENST00000518504 XP32Q5T750 250 aa9.05□□□□□ -0.96
SMN1-210ENST00000518504 DDRGK1Q96HY6 314 aa9.05□□□□□ -0.96
SMN1-210ENST00000518504 GMCL1Q96IK5 515 aa9.05□□□□□ -0.96
SMN1-210ENST00000518504 TRIM34Q9BYJ4 488 aa9.05□□□□□ -0.96
SMN1-210ENST00000518504 DYRK1BQ9Y463 629 aa9.05□□□□□ -0.96
SMN1-210ENST00000518504 MX2P20592 715 aa9.04□□□□□ -0.96
SMN1-210ENST00000518504 NLRP3Q96P20 1036 aa9.04□□□□□ -0.96
SMN1-210ENST00000518504 TRERF1Q96PN7 1200 aa9.04□□□□□ -0.96
SMN1-210ENST00000518504 H7C1W4 665 aa9.03□□□□□ -0.96
SMN1-210ENST00000518504 PROCP04070 461 aa9.03□□□□□ -0.96
SMN1-210ENST00000518504 GPC1P35052 558 aa9.03□□□□□ -0.96
SMN1-210ENST00000518504 GALNT6Q8NCL4 622 aa9.03□□□□□ -0.96
SMN1-210ENST00000518504 NBPF10Q6P3W6 841 aaKnown RBP9.02□□□□□ -0.97
SMN1-210ENST00000518504 NBPF15Q8N660 670 aa9.02□□□□□ -0.97
SMN1-210ENST00000518504 ZBBXA8MT70 800 aa9.01□□□□□ -0.97
SMN1-210ENST00000518504 FBXO45P0C2W1 286 aa9.01□□□□□ -0.97
SMN1-210ENST00000518504 SCTRP47872 440 aa9.01□□□□□ -0.97
SMN1-210ENST00000518504 CC2D2BQ6DHV5 1058 aa9.01□□□□□ -0.97
SMN1-210ENST00000518504 NUCKS1Q9H1E3 243 aaKnown RBP9.01□□□□□ -0.97
SMN1-210ENST00000518504 ERVK-9P63128 1117 aa9□□□□□ -0.97
SMN1-210ENST00000518504 SNRPNP63162 240 aaKnown RBP9□□□□□ -0.97
SMN1-210ENST00000518504 GRIP2Q9C0E4 1043 aa9□□□□□ -0.97
SMN1-210ENST00000518504 ARHGEF10LQ9HCE6 1279 aa9□□□□□ -0.97
SMN1-210ENST00000518504 TIMMDC1Q9NPL8 285 aa9□□□□□ -0.97
SMN1-210ENST00000518504 GPAMQ9HCL2 828 aa8.99□□□□□ -0.97
SMN1-210ENST00000518504 RAB6BQ9NRW1 208 aa8.99□□□□□ -0.97
SMN1-210ENST00000518504 TRIM52Q96A61 297 aa8.98□□□□□ -0.97
SMN1-210ENST00000518504 WASLO00401 505 aaPredicted RBP8.97□□□□□ -0.97
SMN1-210ENST00000518504 OIP5O43482 229 aa8.97□□□□□ -0.97
SMN1-210ENST00000518504 THBS1P07996 1170 aa8.97□□□□□ -0.97
SMN1-210ENST00000518504 CLN3Q13286 438 aa8.97□□□□□ -0.97
SMN1-210ENST00000518504 TAS1R3Q7RTX0 852 aa8.97□□□□□ -0.97
SMN1-210ENST00000518504 CYP2U1Q7Z449 544 aa8.97□□□□□ -0.97
SMN1-210ENST00000518504 OXCT2Q9BYC2 517 aaPredicted RBP8.97□□□□□ -0.97
SMN1-210ENST00000518504 NSFL1CQ9UNZ2 370 aaKnown RBP8.97□□□□□ -0.97
SMN1-210ENST00000518504 SPATA31C2B4DYI2 1134 aa8.96□□□□□ -0.98
SMN1-210ENST00000518504 SHISA8B8ZZ34 492 aa8.96□□□□□ -0.98
SMN1-210ENST00000518504 F11P03951 625 aa8.96□□□□□ -0.98
SMN1-210ENST00000518504 PHKA2P46019 1235 aa8.96□□□□□ -0.98
SMN1-210ENST00000518504 C1orf229Q6ZS94 237 aaPredicted RBP8.96□□□□□ -0.98
SMN1-210ENST00000518504 OSBPL3Q9H4L5 887 aa8.96□□□□□ -0.98
SMN1-210ENST00000518504 PCDHB11Q9Y5F2 797 aa8.96□□□□□ -0.98
SMN1-210ENST00000518504 KRBA1A5PL33 1030 aa8.95□□□□□ -0.98
SMN1-210ENST00000518504 GJD4Q96KN9 370 aaPredicted RBP8.95□□□□□ -0.98
SMN1-210ENST00000518504 RRAGCQ9HB90 399 aa8.95□□□□□ -0.98
SMN1-210ENST00000518504 K7ELQ4 463 aaPredicted RBP8.93□□□□□ -0.98
SMN1-210ENST00000518504 BAG6P46379 1132 aa8.93□□□□□ -0.98
SMN1-210ENST00000518504 RNF20Q5VTR2 975 aa8.93□□□□□ -0.98
SMN1-210ENST00000518504 KLRG1Q96E93 195 aa8.93□□□□□ -0.98
SMN1-210ENST00000518504 ESF1Q9H501 851 aaKnown RBP8.93□□□□□ -0.98
SMN1-210ENST00000518504 TRAK2O60296 914 aa8.92□□□□□ -0.98
SMN1-210ENST00000518504 COL8A1P27658 744 aa8.92□□□□□ -0.98
SMN1-210ENST00000518504 MAP2K3P46734 347 aa8.92□□□□□ -0.98
SMN1-210ENST00000518504 LRRC4BQ9NT99 713 aa8.92□□□□□ -0.98
SMN1-210ENST00000518504 FURINP09958 794 aa8.91□□□□□ -0.98
SMN1-210ENST00000518504 CENPCQ03188 943 aa8.91□□□□□ -0.98
SMN1-210ENST00000518504 WDR44Q5JSH3 913 aa8.91□□□□□ -0.98
SMN1-210ENST00000518504 CNKSR1Q969H4 720 aa8.91□□□□□ -0.98
SMN1-210ENST00000518504 IL2RAP01589 272 aa8.9□□□□□ -0.98
SMN1-210ENST00000518504 TMEM259Q4ZIN3 620 aa8.9□□□□□ -0.98
SMN1-210ENST00000518504 EDARADDQ8WWZ3 215 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms