RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 VAMP4O75379 141 aa30.1■■■□□ 2.41
SLIT3-204ENST00000518140 C8orf58Q8NAV2 365 aa30.1■■■□□ 2.41
SLIT3-204ENST00000518140 RTF1Q92541 710 aaKnown RBP30.1■■■□□ 2.41
SLIT3-204ENST00000518140 CHL1O00533 1208 aa30.09■■■□□ 2.41
SLIT3-204ENST00000518140 PDE3AQ14432 1141 aa30.09■■■□□ 2.41
SLIT3-204ENST00000518140 RGPD5Q99666 1765 aa30.08■■■□□ 2.41
SLIT3-204ENST00000518140 MIS18AQ9NYP9 233 aa30.08■■■□□ 2.41
SLIT3-204ENST00000518140 RLBP1P12271 317 aa30.08■■■□□ 2.41
SLIT3-204ENST00000518140 ERBB3P21860 1342 aa30.07■■■□□ 2.4
SLIT3-204ENST00000518140 GNAT3A8MTJ3 354 aa30.07■■■□□ 2.4
SLIT3-204ENST00000518140 KIAA0232Q92628 1395 aa30.07■■■□□ 2.4
SLIT3-204ENST00000518140 IL17REQ8NFR9 667 aa30.05■■■□□ 2.4
SLIT3-204ENST00000518140 COG6Q9Y2V7 657 aa30.05■■■□□ 2.4
SLIT3-204ENST00000518140 KRT24Q2M2I5 525 aa30.05■■■□□ 2.4
SLIT3-204ENST00000518140 CLUAP1Q96AJ1 413 aa30.05■■■□□ 2.4
SLIT3-204ENST00000518140 CRYBG1Q9Y4K1 1723 aa30.04■■■□□ 2.4
SLIT3-204ENST00000518140 HTATSF1O43719 755 aaKnown RBP30.03■■■□□ 2.4
SLIT3-204ENST00000518140 NCAPD2Q15021 1401 aa30.03■■■□□ 2.4
SLIT3-204ENST00000518140 TWISTNBQ3B726 338 aaPredicted RBP30.03■■■□□ 2.4
SLIT3-204ENST00000518140 COL18A1P39060 1754 aa30.03■■■□□ 2.4
SLIT3-204ENST00000518140 NOB1Q9ULX3 412 aaKnown RBP30.02■■■□□ 2.4
SLIT3-204ENST00000518140 LTBP4Q8N2S1 1624 aa30.02■■■□□ 2.4
SLIT3-204ENST00000518140 MAP3K5Q99683 1374 aa30.02■■■□□ 2.4
SLIT3-204ENST00000518140 TCERG1O14776 1098 aaKnown RBP30.02■■■□□ 2.4
SLIT3-204ENST00000518140 ALDH1L2Q3SY69 923 aa30■■■□□ 2.39
SLIT3-204ENST00000518140 ZKSCAN2Q63HK3 967 aa30■■■□□ 2.39
SLIT3-204ENST00000518140 CPDO75976 1380 aa30■■■□□ 2.39
SLIT3-204ENST00000518140 NLRP2Q9NX02 1062 aa30■■■□□ 2.39
SLIT3-204ENST00000518140 TRIM27P14373 513 aa29.97■■■□□ 2.39
SLIT3-204ENST00000518140 PLEKHO1Q53GL0 409 aaPredicted RBP29.97■■■□□ 2.39
SLIT3-204ENST00000518140 ZNF428Q96B54 188 aa29.97■■■□□ 2.39
SLIT3-204ENST00000518140 NHSL1Q5SYE7 1610 aa29.96■■■□□ 2.39
SLIT3-204ENST00000518140 MRPL50Q8N5N7 158 aaKnown RBP29.96■■■□□ 2.39
SLIT3-204ENST00000518140 LGR6Q9HBX8 967 aa29.96■■■□□ 2.39
SLIT3-204ENST00000518140 TSPYL4Q9UJ04 414 aa29.96■■■□□ 2.39
SLIT3-204ENST00000518140 CSB-PGBD3P0DP91 1061 aa29.95■■■□□ 2.39
SLIT3-204ENST00000518140 ZNF530Q6P9A1 599 aaPredicted RBP29.95■■■□□ 2.39
SLIT3-204ENST00000518140 ATF7IPQ6VMQ6 1270 aa29.94■■■□□ 2.38
SLIT3-204ENST00000518140 PRDM11Q9NQV5 511 aa29.94■■■□□ 2.38
SLIT3-204ENST00000518140 CAMTA1Q9Y6Y1 1673 aa29.94■■■□□ 2.38
SLIT3-204ENST00000518140 HAP1P54257 671 aaPredicted RBP29.94■■■□□ 2.38
SLIT3-204ENST00000518140 DZIP1LQ8IYY4 767 aaKnown RBP29.94■■■□□ 2.38
SLIT3-204ENST00000518140 AMOTQ4VCS5 1084 aa29.92■■■□□ 2.38
SLIT3-204ENST00000518140 BRPF1P55201 1214 aaPredicted RBP29.92■■■□□ 2.38
SLIT3-204ENST00000518140 LMO7Q8WWI1 1683 aa29.92■■■□□ 2.38
SLIT3-204ENST00000518140 AKAP4Q5JQC9 854 aa29.91■■■□□ 2.38
SLIT3-204ENST00000518140 MPRIPQ6WCQ1 1025 aa29.91■■■□□ 2.38
SLIT3-204ENST00000518140 FTSJ3Q8IY81 847 aaKnown RBP29.91■■■□□ 2.38
SLIT3-204ENST00000518140 KIF16BQ96L93 1317 aa29.9■■■□□ 2.38
SLIT3-204ENST00000518140 TAF7Q15545 349 aaPredicted RBP29.9■■■□□ 2.38
SLIT3-204ENST00000518140 LRRC37A3O60309 1634 aa29.9■■■□□ 2.38
SLIT3-204ENST00000518140 CEMIPQ8WUJ3 1361 aa29.89■■■□□ 2.38
SLIT3-204ENST00000518140 ROBO1Q9Y6N7 1651 aa29.88■■■□□ 2.37
SLIT3-204ENST00000518140 IPO8O15397 1037 aaKnown RBP29.87■■■□□ 2.37
SLIT3-204ENST00000518140 MVPQ14764 893 aaKnown RBP29.87■■■□□ 2.37
SLIT3-204ENST00000518140 RAPGEF4Q8WZA2 1011 aa29.87■■■□□ 2.37
SLIT3-204ENST00000518140 ABCC6O95255 1503 aa29.86■■■□□ 2.37
SLIT3-204ENST00000518140 KDM2BQ8NHM5 1336 aa29.85■■■□□ 2.37
SLIT3-204ENST00000518140 C1orf141Q5JVX7 400 aa29.85■■■□□ 2.37
SLIT3-204ENST00000518140 TMEM57Q8N5G2 664 aa29.85■■■□□ 2.37
SLIT3-204ENST00000518140 FAM208AQ9UK61 1670 aaKnown RBP29.85■■■□□ 2.37
SLIT3-204ENST00000518140 MS4A1P11836 297 aa29.84■■■□□ 2.37
SLIT3-204ENST00000518140 ABCA3Q99758 1704 aa29.83■■■□□ 2.37
SLIT3-204ENST00000518140 MEGF6O75095 1541 aa29.83■■■□□ 2.37
SLIT3-204ENST00000518140 RNMTO43148 476 aaKnown RBP29.83■■■□□ 2.37
SLIT3-204ENST00000518140 TATP17735 454 aaPredicted RBP29.83■■■□□ 2.37
SLIT3-204ENST00000518140 SKAP1Q86WV1 359 aa29.82■■■□□ 2.36
SLIT3-204ENST00000518140 ITPRIPQ8IWB1 547 aa29.81■■■□□ 2.36
SLIT3-204ENST00000518140 IGHDP01880 384 aa29.81■■■□□ 2.36
SLIT3-204ENST00000518140 PCDHB15Q9Y5E8 787 aa29.81■■■□□ 2.36
SLIT3-204ENST00000518140 ARHGAP45Q92619 1136 aa29.8■■■□□ 2.36
SLIT3-204ENST00000518140 WDR17Q8IZU2 1322 aa29.8■■■□□ 2.36
SLIT3-204ENST00000518140 BABAM1Q9NWV8 329 aa29.8■■■□□ 2.36
SLIT3-204ENST00000518140 KCNQ3O43525 872 aa29.78■■■□□ 2.36
SLIT3-204ENST00000518140 TOM1L2Q6ZVM7 507 aa29.78■■■□□ 2.36
SLIT3-204ENST00000518140 COL5A2P05997 1499 aaPredicted RBP29.78■■■□□ 2.36
SLIT3-204ENST00000518140 TEFQ10587 303 aa29.78■■■□□ 2.36
SLIT3-204ENST00000518140 STRN4Q9NRL3 753 aa29.78■■■□□ 2.36
SLIT3-204ENST00000518140 CENPQQ7L2Z9 268 aaPredicted RBP29.77■■■□□ 2.36
SLIT3-204ENST00000518140 AHDC1Q5TGY3 1603 aaPredicted RBP29.76■■■□□ 2.35
SLIT3-204ENST00000518140 PIP4K2BP78356 416 aa29.75■■■□□ 2.35
SLIT3-204ENST00000518140 LARP1Q6PKG0 1096 aaKnown RBP29.75■■■□□ 2.35
SLIT3-204ENST00000518140 SPG7Q9UQ90 795 aa29.75■■■□□ 2.35
SLIT3-204ENST00000518140 SLC4A2P04920 1241 aa29.75■■■□□ 2.35
SLIT3-204ENST00000518140 PHKG2P15735 406 aa29.74■■■□□ 2.35
SLIT3-204ENST00000518140 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.74■■■□□ 2.35
SLIT3-204ENST00000518140 DDX19BQ9UMR2 479 aa29.74■■■□□ 2.35
SLIT3-204ENST00000518140 BTBD11A6QL63 1104 aa29.73■■■□□ 2.35
SLIT3-204ENST00000518140 NECTIN2Q92692 538 aa29.73■■■□□ 2.35
SLIT3-204ENST00000518140 CYP27B1O15528 508 aa29.73■■■□□ 2.35
SLIT3-204ENST00000518140 EVA1CP58658 441 aa29.73■■■□□ 2.35
SLIT3-204ENST00000518140 AAMPQ13685 434 aa29.73■■■□□ 2.35
SLIT3-204ENST00000518140 EIF4A1P60842 406 aaKnown RBP29.72■■■□□ 2.35
SLIT3-204ENST00000518140 G2E3Q7L622 706 aa29.72■■■□□ 2.35
SLIT3-204ENST00000518140 ABCC4O15439 1325 aa29.71■■■□□ 2.35
SLIT3-204ENST00000518140 CARD10Q9BWT7 1032 aa29.7■■■□□ 2.34
SLIT3-204ENST00000518140 API5Q9BZZ5 524 aaKnown RBP29.7■■■□□ 2.34
SLIT3-204ENST00000518140 ZBTB40Q9NUA8 1239 aa29.7■■■□□ 2.34
SLIT3-204ENST00000518140 BTG4Q9NY30 223 aa29.7■■■□□ 2.34
SLIT3-204ENST00000518140 IFNL2Q8IZJ0 200 aa29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms