RNA–Protein interactions for RNA: ENST00000515930.1

RNU6-1053P-201, Transcript of RNA, U6 small nuclear 1053, pseudogene, humanhuman

BASIC

Gene RNU6-1053P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1053P-201ENST00000515930 PHRF1Q9P1Y6 1649 aaKnown RBP2.9□□□□□ -1.94
RNU6-1053P-201ENST00000515930 LAMA3Q16787 3333 aa2.9□□□□□ -1.94
RNU6-1053P-201ENST00000515930 NAV2Q8IVL1 2488 aa2.9□□□□□ -1.95
RNU6-1053P-201ENST00000515930 RGL2O15211 777 aa2.9□□□□□ -1.95
RNU6-1053P-201ENST00000515930 EN2P19622 333 aaPredicted RBP2.9□□□□□ -1.95
RNU6-1053P-201ENST00000515930 FBXO46Q6PJ61 603 aaPredicted RBP2.9□□□□□ -1.95
RNU6-1053P-201ENST00000515930 ANKRD24Q8TF21 1146 aa2.9□□□□□ -1.95
RNU6-1053P-201ENST00000515930 PRDM11Q9NQV5 511 aa2.9□□□□□ -1.95
RNU6-1053P-201ENST00000515930 LRRC4BQ9NT99 713 aa2.9□□□□□ -1.95
RNU6-1053P-201ENST00000515930 SAGE1Q9NXZ1 904 aa2.9□□□□□ -1.95
RNU6-1053P-201ENST00000515930 HDAC9Q9UKV0 1011 aa2.9□□□□□ -1.95
RNU6-1053P-201ENST00000515930 THRAP3Q9Y2W1 955 aaKnown RBP2.9□□□□□ -1.95
RNU6-1053P-201ENST00000515930 BRCA2P51587 3418 aa2.9□□□□□ -1.95
RNU6-1053P-201ENST00000515930 VIRMAQ69YN4 1812 aaKnown RBP2.9□□□□□ -1.95
RNU6-1053P-201ENST00000515930 CCDC144AA2RUR9 1427 aa2.9□□□□□ -1.95
RNU6-1053P-201ENST00000515930 ADAMTS13Q76LX8 1427 aa2.9□□□□□ -1.95
RNU6-1053P-201ENST00000515930 CHD6Q8TD26 2715 aa2.9□□□□□ -1.95
RNU6-1053P-201ENST00000515930 MTUS2Q5JR59 1369 aa2.89□□□□□ -1.95
RNU6-1053P-201ENST00000515930 DUOX2Q9NRD8 1548 aa2.89□□□□□ -1.95
RNU6-1053P-201ENST00000515930 PLCH1Q4KWH8 1693 aa2.89□□□□□ -1.95
RNU6-1053P-201ENST00000515930 TOPAZ1Q8N9V7 1692 aa2.89□□□□□ -1.95
RNU6-1053P-201ENST00000515930 CHD2O14647 1828 aaKnown RBP2.89□□□□□ -1.95
RNU6-1053P-201ENST00000515930 ZNF318Q5VUA4 2279 aa2.89□□□□□ -1.95
RNU6-1053P-201ENST00000515930 A0A0G2JLW4 131 aa2.89□□□□□ -1.95
RNU6-1053P-201ENST00000515930 EVA1CP58658 441 aa2.89□□□□□ -1.95
RNU6-1053P-201ENST00000515930 TGFB2P61812 414 aa2.89□□□□□ -1.95
RNU6-1053P-201ENST00000515930 EVX2Q03828 476 aa2.89□□□□□ -1.95
RNU6-1053P-201ENST00000515930 PSME1Q06323 249 aa2.89□□□□□ -1.95
RNU6-1053P-201ENST00000515930 DDB1Q16531 1140 aa2.89□□□□□ -1.95
RNU6-1053P-201ENST00000515930 COL23A1Q86Y22 540 aaPredicted RBP2.89□□□□□ -1.95
RNU6-1053P-201ENST00000515930 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.89□□□□□ -1.95
RNU6-1053P-201ENST00000515930 DPF3Q92784 378 aa2.89□□□□□ -1.95
RNU6-1053P-201ENST00000515930 GUCD1Q96NT3 240 aa2.89□□□□□ -1.95
RNU6-1053P-201ENST00000515930 CNTNAP3BQ96NU0 1288 aa2.89□□□□□ -1.95
RNU6-1053P-201ENST00000515930 UHRF1Q96T88 793 aaPredicted RBP2.89□□□□□ -1.95
RNU6-1053P-201ENST00000515930 CNTNAP3Q9BZ76 1288 aa2.89□□□□□ -1.95
RNU6-1053P-201ENST00000515930 YTHDC2Q9H6S0 1430 aaKnown RBP2.89□□□□□ -1.95
RNU6-1053P-201ENST00000515930 RALYQ9UKM9 306 aaKnown RBP2.89□□□□□ -1.95
RNU6-1053P-201ENST00000515930 KMT2BQ9UMN6 2715 aaPredicted RBP2.89□□□□□ -1.95
RNU6-1053P-201ENST00000515930 CASP8AP2Q9UKL3 1982 aa2.89□□□□□ -1.95
RNU6-1053P-201ENST00000515930 LMTK2Q8IWU2 1503 aa2.88□□□□□ -1.95
RNU6-1053P-201ENST00000515930 ARHGEF10O15013 1369 aa2.88□□□□□ -1.95
RNU6-1053P-201ENST00000515930 EYSQ5T1H1 3165 aa2.88□□□□□ -1.95
RNU6-1053P-201ENST00000515930 ZNF462Q96JM2 2506 aa2.88□□□□□ -1.95
RNU6-1053P-201ENST00000515930 MYO5CQ9NQX4 1742 aa2.88□□□□□ -1.95
RNU6-1053P-201ENST00000515930 BCL9O00512 1426 aa2.88□□□□□ -1.95
RNU6-1053P-201ENST00000515930 SLC27A3Q5K4L6 730 aa2.88□□□□□ -1.95
RNU6-1053P-201ENST00000515930 CNTROBQ8N137 903 aa2.88□□□□□ -1.95
RNU6-1053P-201ENST00000515930 ADAMTS19Q8TE59 1207 aa2.88□□□□□ -1.95
RNU6-1053P-201ENST00000515930 DDX21Q9NR30 783 aaKnown RBP eCLIP2.88□□□□□ -1.95
RNU6-1053P-201ENST00000515930 TLL2Q9Y6L7 1015 aa2.88□□□□□ -1.95
RNU6-1053P-201ENST00000515930 THSD7BQ9C0I4 1608 aa2.88□□□□□ -1.95
RNU6-1053P-201ENST00000515930 TPRP12270 2363 aaKnown RBP2.88□□□□□ -1.95
RNU6-1053P-201ENST00000515930 MINK1Q8N4C8 1332 aaPredicted RBP2.88□□□□□ -1.95
RNU6-1053P-201ENST00000515930 IRS2Q9Y4H2 1338 aa2.88□□□□□ -1.95
RNU6-1053P-201ENST00000515930 ARHGEF5Q12774 1597 aa2.87□□□□□ -1.95
RNU6-1053P-201ENST00000515930 CFAP47Q6ZTR5 3102 aa2.87□□□□□ -1.95
RNU6-1053P-201ENST00000515930 CRB1P82279 1406 aa2.87□□□□□ -1.95
RNU6-1053P-201ENST00000515930 TNS3Q68CZ2 1445 aa2.87□□□□□ -1.95
RNU6-1053P-201ENST00000515930 KIAA1107Q9UPP5 1409 aa2.87□□□□□ -1.95
RNU6-1053P-201ENST00000515930 RIMS2Q9UQ26 1411 aa2.87□□□□□ -1.95
RNU6-1053P-201ENST00000515930 IQCA1LA6NCM1 817 aa2.87□□□□□ -1.95
RNU6-1053P-201ENST00000515930 TRPA1O75762 1119 aa2.87□□□□□ -1.95
RNU6-1053P-201ENST00000515930 ZIC2O95409 532 aaPredicted RBP2.87□□□□□ -1.95
RNU6-1053P-201ENST00000515930 HOXB3P14651 431 aaPredicted RBP2.87□□□□□ -1.95
RNU6-1053P-201ENST00000515930 LMNB1P20700 586 aa2.87□□□□□ -1.95
RNU6-1053P-201ENST00000515930 NOGQ13253 232 aa2.87□□□□□ -1.95
RNU6-1053P-201ENST00000515930 LRIT3Q3SXY7 679 aa2.87□□□□□ -1.95
RNU6-1053P-201ENST00000515930 EAPPQ56P03 285 aaPredicted RBP2.87□□□□□ -1.95
RNU6-1053P-201ENST00000515930 MARCH10Q8NA82 808 aaPredicted RBP2.87□□□□□ -1.95
RNU6-1053P-201ENST00000515930 DCAF5Q96JK2 942 aa2.87□□□□□ -1.95
RNU6-1053P-201ENST00000515930 CLEC11AQ9Y240 323 aa2.87□□□□□ -1.95
RNU6-1053P-201ENST00000515930 NR2E3Q9Y5X4 410 aa2.87□□□□□ -1.95
RNU6-1053P-201ENST00000515930 ATP7BP35670 1465 aa2.87□□□□□ -1.95
RNU6-1053P-201ENST00000515930 CNTNAP4Q9C0A0 1308 aa2.87□□□□□ -1.95
RNU6-1053P-201ENST00000515930 NRXN3Q9Y4C0 1643 aa2.86□□□□□ -1.95
RNU6-1053P-201ENST00000515930 ZFYVE9O95405 1425 aa2.86□□□□□ -1.95
RNU6-1053P-201ENST00000515930 CLIP1P30622 1438 aa2.86□□□□□ -1.95
RNU6-1053P-201ENST00000515930 ASH1LQ9NR48 2969 aaKnown RBP2.86□□□□□ -1.95
RNU6-1053P-201ENST00000515930 NRAPQ86VF7 1730 aa2.86□□□□□ -1.95
RNU6-1053P-201ENST00000515930 GPR37L1O60883 481 aa2.86□□□□□ -1.95
RNU6-1053P-201ENST00000515930 DPEP1P16444 411 aa2.86□□□□□ -1.95
RNU6-1053P-201ENST00000515930 ST3GAL2Q16842 350 aa2.86□□□□□ -1.95
RNU6-1053P-201ENST00000515930 NBPF1Q3BBV0 1214 aa2.86□□□□□ -1.95
RNU6-1053P-201ENST00000515930 DALRD3Q5D0E6 543 aaKnown RBP2.86□□□□□ -1.95
RNU6-1053P-201ENST00000515930 MAP1SQ66K74 1059 aaPredicted RBP2.86□□□□□ -1.95
RNU6-1053P-201ENST00000515930 FAM109BQ6ICB4 259 aaPredicted RBP2.86□□□□□ -1.95
RNU6-1053P-201ENST00000515930 LARP1Q6PKG0 1096 aaKnown RBP2.86□□□□□ -1.95
RNU6-1053P-201ENST00000515930 TMEM106CQ9BVX2 250 aa2.86□□□□□ -1.95
RNU6-1053P-201ENST00000515930 TAF1DQ9H5J8 278 aaPredicted RBP2.86□□□□□ -1.95
RNU6-1053P-201ENST00000515930 RNF186Q9NXI6 227 aa2.86□□□□□ -1.95
RNU6-1053P-201ENST00000515930 LAMB4A4D0S4 1761 aa2.86□□□□□ -1.95
RNU6-1053P-201ENST00000515930 TTC21AQ8NDW8 1320 aa2.86□□□□□ -1.95
RNU6-1053P-201ENST00000515930 INO80Q9ULG1 1556 aaPredicted RBP2.86□□□□□ -1.95
RNU6-1053P-201ENST00000515930 PAPPAQ13219 1627 aa2.86□□□□□ -1.95
RNU6-1053P-201ENST00000515930 KIAA0232Q92628 1395 aa2.86□□□□□ -1.95
RNU6-1053P-201ENST00000515930 TROQ12816 1431 aaPredicted RBP2.85□□□□□ -1.95
RNU6-1053P-201ENST00000515930 ZNF292O60281 2723 aa2.85□□□□□ -1.95
RNU6-1053P-201ENST00000515930 COL24A1Q17RW2 1714 aa2.85□□□□□ -1.95
RNU6-1053P-201ENST00000515930 SOBPA7XYQ1 873 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms