RNA–Protein interactions for RNA: ENST00000515605.1

TNIP3-207, Transcript of TNFAIP3 interacting protein 3, humanhuman

TSL 4

Gene TNIP3, Length 838 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP3-207ENST00000515605 MEGF6O75095 1541 aa16.75■□□□□ 0.27
TNIP3-207ENST00000515605 ILDR2Q71H61 639 aa16.75■□□□□ 0.27
TNIP3-207ENST00000515605 SEPT12Q8IYM1 358 aa16.75■□□□□ 0.27
TNIP3-207ENST00000515605 CDCA7Q9BWT1 371 aaPredicted RBP16.75■□□□□ 0.27
TNIP3-207ENST00000515605 EP400Q96L91 3159 aa16.75■□□□□ 0.27
TNIP3-207ENST00000515605 OVOS2A0A0G2JMS6 1433 aa16.74■□□□□ 0.27
TNIP3-207ENST00000515605 DIAPH1O60610 1272 aaKnown RBP16.74■□□□□ 0.27
TNIP3-207ENST00000515605 USP35Q9P2H5 1018 aa16.74■□□□□ 0.27
TNIP3-207ENST00000515605 CCDC9Q9Y3X0 531 aaKnown RBP16.74■□□□□ 0.27
TNIP3-207ENST00000515605 LRRC37A3O60309 1634 aa16.74■□□□□ 0.27
TNIP3-207ENST00000515605 CACNB1Q02641 598 aaPredicted RBP16.73■□□□□ 0.27
TNIP3-207ENST00000515605 USHBP1Q8N6Y0 703 aa16.73■□□□□ 0.27
TNIP3-207ENST00000515605 IL2RBP14784 551 aa16.72■□□□□ 0.27
TNIP3-207ENST00000515605 BCL9O00512 1426 aa16.71■□□□□ 0.27
TNIP3-207ENST00000515605 TNS2Q63HR2 1409 aa16.71■□□□□ 0.27
TNIP3-207ENST00000515605 AEBP1Q8IUX7 1158 aa16.71■□□□□ 0.27
TNIP3-207ENST00000515605 CFAP53Q96M91 514 aa16.71■□□□□ 0.27
TNIP3-207ENST00000515605 BRWD3Q6RI45 1802 aa16.69■□□□□ 0.26
TNIP3-207ENST00000515605 ANP32CO43423 234 aa16.69■□□□□ 0.26
TNIP3-207ENST00000515605 CCDC184Q52MB2 194 aa16.69■□□□□ 0.26
TNIP3-207ENST00000515605 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.69■□□□□ 0.26
TNIP3-207ENST00000515605 SHANK3Q9BYB0 1731 aa16.69■□□□□ 0.26
TNIP3-207ENST00000515605 PKD1L3Q7Z443 1732 aa16.68■□□□□ 0.26
TNIP3-207ENST00000515605 SULT6B1Q6IMI4 303 aa16.68■□□□□ 0.26
TNIP3-207ENST00000515605 RSPH6AQ9H0K4 717 aa16.67■□□□□ 0.26
TNIP3-207ENST00000515605 DDB1Q16531 1140 aa16.66■□□□□ 0.26
TNIP3-207ENST00000515605 KRT27Q7Z3Y8 459 aa16.66■□□□□ 0.26
TNIP3-207ENST00000515605 MARCH10Q8NA82 808 aaPredicted RBP16.66■□□□□ 0.26
TNIP3-207ENST00000515605 RAPGEF4Q8WZA2 1011 aa16.65■□□□□ 0.26
TNIP3-207ENST00000515605 EXOC5O00471 708 aa16.64■□□□□ 0.25
TNIP3-207ENST00000515605 FCHSD2O94868 740 aa16.64■□□□□ 0.25
TNIP3-207ENST00000515605 TATP17735 454 aaPredicted RBP16.64■□□□□ 0.25
TNIP3-207ENST00000515605 DIEXFQ68CQ4 756 aaKnown RBP16.64■□□□□ 0.25
TNIP3-207ENST00000515605 ZCRB1Q8TBF4 217 aaKnown RBP16.64■□□□□ 0.25
TNIP3-207ENST00000515605 PLEKHF1Q96S99 279 aa16.64■□□□□ 0.25
TNIP3-207ENST00000515605 NUDCQ9Y266 331 aa16.64■□□□□ 0.25
TNIP3-207ENST00000515605 CYP27B1O15528 508 aa16.63■□□□□ 0.25
TNIP3-207ENST00000515605 HMOX1P09601 288 aa16.63■□□□□ 0.25
TNIP3-207ENST00000515605 NKX1-1Q15270 411 aaPredicted RBP16.63■□□□□ 0.25
TNIP3-207ENST00000515605 U2SURPO15042 1029 aaKnown RBP16.62■□□□□ 0.25
TNIP3-207ENST00000515605 PNISRQ8TF01 805 aaKnown RBP16.62■□□□□ 0.25
TNIP3-207ENST00000515605 U2AF1L5P0DN76 240 aaPredicted RBP16.61■□□□□ 0.25
TNIP3-207ENST00000515605 U2AF1Q01081 240 aaKnown RBP eCLIP16.61■□□□□ 0.25
TNIP3-207ENST00000515605 PDE3BQ13370 1112 aa16.6■□□□□ 0.25
TNIP3-207ENST00000515605 AMOTQ4VCS5 1084 aa16.6■□□□□ 0.25
TNIP3-207ENST00000515605 PHACTR3Q96KR7 559 aa16.6■□□□□ 0.25
TNIP3-207ENST00000515605 PHKG2P15735 406 aa16.59■□□□□ 0.25
TNIP3-207ENST00000515605 PRKAR2BP31323 418 aa16.59■□□□□ 0.25
TNIP3-207ENST00000515605 PCDH11XQ9BZA7 1347 aa16.59■□□□□ 0.25
TNIP3-207ENST00000515605 PCDH11YQ9BZA8 1340 aa16.59■□□□□ 0.25
TNIP3-207ENST00000515605 CCER2I3L3R5 266 aa16.58■□□□□ 0.24
TNIP3-207ENST00000515605 MTHFSDQ2M296 383 aaKnown RBP16.58■□□□□ 0.24
TNIP3-207ENST00000515605 PLEKHO1Q53GL0 409 aaPredicted RBP16.58■□□□□ 0.24
TNIP3-207ENST00000515605 FAM196AQ6ZSG2 479 aa16.58■□□□□ 0.24
TNIP3-207ENST00000515605 ADAMTS8Q9UP79 889 aa16.58■□□□□ 0.24
TNIP3-207ENST00000515605 SPG7Q9UQ90 795 aa16.58■□□□□ 0.24
TNIP3-207ENST00000515605 ADAMTS7Q9UKP4 1686 aa16.58■□□□□ 0.24
TNIP3-207ENST00000515605 A0A0G2JS52 829 aa16.57■□□□□ 0.24
TNIP3-207ENST00000515605 MYT1Q01538 1121 aa16.57■□□□□ 0.24
TNIP3-207ENST00000515605 FAM182BQ5T319 152 aa16.57■□□□□ 0.24
TNIP3-207ENST00000515605 KDM6AO15550 1401 aaPredicted RBP16.55■□□□□ 0.24
TNIP3-207ENST00000515605 IFNL2Q8IZJ0 200 aa16.55■□□□□ 0.24
TNIP3-207ENST00000515605 MIER1Q8N108 512 aa16.55■□□□□ 0.24
TNIP3-207ENST00000515605 DDX54Q8TDD1 881 aaKnown RBP16.55■□□□□ 0.24
TNIP3-207ENST00000515605 MRS2Q9HD23 443 aa16.55■□□□□ 0.24
TNIP3-207ENST00000515605 TOGARAM1Q9Y4F4 1720 aa16.54■□□□□ 0.24
TNIP3-207ENST00000515605 ABCB7O75027 752 aa16.54■□□□□ 0.24
TNIP3-207ENST00000515605 AKAP4Q5JQC9 854 aa16.54■□□□□ 0.24
TNIP3-207ENST00000515605 SBF2Q86WG5 1849 aa16.54■□□□□ 0.24
TNIP3-207ENST00000515605 POLA2Q14181 598 aa16.53■□□□□ 0.24
TNIP3-207ENST00000515605 ZNF530Q6P9A1 599 aaPredicted RBP16.53■□□□□ 0.24
TNIP3-207ENST00000515605 PTF1AQ7RTS3 328 aa16.53■□□□□ 0.24
TNIP3-207ENST00000515605 UPF1Q92900 1129 aaKnown RBP eCLIP16.53■□□□□ 0.24
TNIP3-207ENST00000515605 NHSQ6T4R5 1651 aa16.53■□□□□ 0.24
TNIP3-207ENST00000515605 GAS2L2Q8NHY3 880 aa16.52■□□□□ 0.24
TNIP3-207ENST00000515605 CEMIPQ8WUJ3 1361 aa16.51■□□□□ 0.23
TNIP3-207ENST00000515605 TNS1Q9HBL0 1735 aaKnown RBP16.51■□□□□ 0.23
TNIP3-207ENST00000515605 MRC1P22897 1456 aa16.51■□□□□ 0.23
TNIP3-207ENST00000515605 DSG3P32926 999 aa16.51■□□□□ 0.23
TNIP3-207ENST00000515605 WDR43Q15061 677 aaKnown RBP eCLIP16.51■□□□□ 0.23
TNIP3-207ENST00000515605 DCAF5Q96JK2 942 aa16.51■□□□□ 0.23
TNIP3-207ENST00000515605 BCL11BQ9C0K0 894 aaPredicted RBP16.51■□□□□ 0.23
TNIP3-207ENST00000515605 PNNQ9H307 717 aaKnown RBP16.51■□□□□ 0.23
TNIP3-207ENST00000515605 KCNQ2O43526 872 aa16.5■□□□□ 0.23
TNIP3-207ENST00000515605 HSP90AB1P08238 724 aaKnown RBP16.5■□□□□ 0.23
TNIP3-207ENST00000515605 CCDC125Q86Z20 511 aa16.5■□□□□ 0.23
TNIP3-207ENST00000515605 RUNDC1Q96C34 613 aa16.5■□□□□ 0.23
TNIP3-207ENST00000515605 NFE2L2Q16236 605 aa16.49■□□□□ 0.23
TNIP3-207ENST00000515605 IL17REQ8NFR9 667 aa16.49■□□□□ 0.23
TNIP3-207ENST00000515605 DOT1LQ8TEK3 1739 aa16.49■□□□□ 0.23
TNIP3-207ENST00000515605 MAP3K5Q99683 1374 aa16.49■□□□□ 0.23
TNIP3-207ENST00000515605 ERVV-2B6SEH9 535 aa16.48■□□□□ 0.23
TNIP3-207ENST00000515605 SOCS7O14512 581 aa16.48■□□□□ 0.23
TNIP3-207ENST00000515605 HTATSF1O43719 755 aaKnown RBP16.48■□□□□ 0.23
TNIP3-207ENST00000515605 TRIM37O94972 964 aa16.48■□□□□ 0.23
TNIP3-207ENST00000515605 LGR6Q9HBX8 967 aa16.48■□□□□ 0.23
TNIP3-207ENST00000515605 GNAT3A8MTJ3 354 aa16.47■□□□□ 0.23
TNIP3-207ENST00000515605 RNMTO43148 476 aaKnown RBP16.47■□□□□ 0.23
TNIP3-207ENST00000515605 TMPOP42166 694 aaKnown RBP16.47■□□□□ 0.23
TNIP3-207ENST00000515605 PRIM1P49642 420 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms