RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 ANKMY2Q8IV38 441 aa3.21□□□□□ -1.9
AC025539.1-201ENST00000515343 RETREG2Q8NC44 543 aa3.21□□□□□ -1.9
AC025539.1-201ENST00000515343 SLAIN2Q9P270 581 aa3.21□□□□□ -1.9
AC025539.1-201ENST00000515343 PIK3CDO00329 1044 aa3.21□□□□□ -1.9
AC025539.1-201ENST00000515343 GPC1P35052 558 aa3.21□□□□□ -1.9
AC025539.1-201ENST00000515343 DZIP3Q86Y13 1208 aaKnown RBP3.21□□□□□ -1.9
AC025539.1-201ENST00000515343 PDIA4P13667 645 aaKnown RBP3.2□□□□□ -1.9
AC025539.1-201ENST00000515343 CTHP32929 405 aa3.2□□□□□ -1.9
AC025539.1-201ENST00000515343 NOD1Q9Y239 953 aa3.2□□□□□ -1.9
AC025539.1-201ENST00000515343 IGFBP4P22692 258 aa3.2□□□□□ -1.9
AC025539.1-201ENST00000515343 RC3H1Q5TC82 1133 aaKnown RBP3.2□□□□□ -1.9
AC025539.1-201ENST00000515343 CC2D2BQ6DHV5 1058 aa3.2□□□□□ -1.9
AC025539.1-201ENST00000515343 DOLKQ9UPQ8 538 aa3.2□□□□□ -1.9
AC025539.1-201ENST00000515343 CDK2AP1O14519 115 aa3.2□□□□□ -1.9
AC025539.1-201ENST00000515343 ERCC3P19447 782 aa3.2□□□□□ -1.9
AC025539.1-201ENST00000515343 WDR44Q5JSH3 913 aa3.2□□□□□ -1.9
AC025539.1-201ENST00000515343 KCTD15Q96SI1 283 aaPredicted RBP3.2□□□□□ -1.9
AC025539.1-201ENST00000515343 DNAAF2Q9NVR5 837 aaKnown RBP3.2□□□□□ -1.9
AC025539.1-201ENST00000515343 FOXO3O43524 673 aa3.19□□□□□ -1.9
AC025539.1-201ENST00000515343 LMOD1P29536 600 aaPredicted RBP3.19□□□□□ -1.9
AC025539.1-201ENST00000515343 SCNN1DP51172 638 aa3.19□□□□□ -1.9
AC025539.1-201ENST00000515343 INTS6LQ5JSJ4 861 aaKnown RBP3.19□□□□□ -1.9
AC025539.1-201ENST00000515343 NOVA2Q9UNW9 492 aaKnown RBP3.19□□□□□ -1.9
AC025539.1-201ENST00000515343 CSB-PGBD3P0DP91 1061 aa3.19□□□□□ -1.9
AC025539.1-201ENST00000515343 SLC19A1P41440 591 aa3.19□□□□□ -1.9
AC025539.1-201ENST00000515343 PTPN5P54829 565 aa3.19□□□□□ -1.9
AC025539.1-201ENST00000515343 IRX2Q9BZI1 471 aaPredicted RBP3.19□□□□□ -1.9
AC025539.1-201ENST00000515343 CCDC180Q9P1Z9 1646 aa3.19□□□□□ -1.9
AC025539.1-201ENST00000515343 ZBTB24O43167 697 aaPredicted RBP3.19□□□□□ -1.9
AC025539.1-201ENST00000515343 SKIP12755 728 aa3.19□□□□□ -1.9
AC025539.1-201ENST00000515343 ECM1Q16610 540 aa3.19□□□□□ -1.9
AC025539.1-201ENST00000515343 SLC10A4Q96EP9 437 aa3.19□□□□□ -1.9
AC025539.1-201ENST00000515343 OSBPL3Q9H4L5 887 aa3.19□□□□□ -1.9
AC025539.1-201ENST00000515343 C11orf16Q9NQ32 467 aa3.19□□□□□ -1.9
AC025539.1-201ENST00000515343 PCDHB9Q9Y5E1 797 aa3.19□□□□□ -1.9
AC025539.1-201ENST00000515343 SPATA31C2B4DYI2 1134 aa3.18□□□□□ -1.9
AC025539.1-201ENST00000515343 RNF144AP50876 292 aaPredicted RBP3.18□□□□□ -1.9
AC025539.1-201ENST00000515343 LARP1Q6PKG0 1096 aaKnown RBP3.18□□□□□ -1.9
AC025539.1-201ENST00000515343 MKRN1Q9UHC7 482 aaKnown RBP3.18□□□□□ -1.9
AC025539.1-201ENST00000515343 AMOTL2Q9Y2J4 779 aa3.18□□□□□ -1.9
AC025539.1-201ENST00000515343 TMEM164Q5U3C3 297 aa3.18□□□□□ -1.9
AC025539.1-201ENST00000515343 FAM200AQ8TCP9 573 aa3.18□□□□□ -1.9
AC025539.1-201ENST00000515343 C7orf43Q8WVR3 580 aa3.18□□□□□ -1.9
AC025539.1-201ENST00000515343 FHDC1Q9C0D6 1143 aaPredicted RBP3.18□□□□□ -1.9
AC025539.1-201ENST00000515343 CXXC1Q9P0U4 656 aaPredicted RBP3.18□□□□□ -1.9
AC025539.1-201ENST00000515343 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.18□□□□□ -1.9
AC025539.1-201ENST00000515343 TMEM229AB2RXF0 380 aa3.18□□□□□ -1.9
AC025539.1-201ENST00000515343 ERVH48-1M5A8F1 160 aa3.18□□□□□ -1.9
AC025539.1-201ENST00000515343 NCOA4Q13772 614 aa3.18□□□□□ -1.9
AC025539.1-201ENST00000515343 CRTC2Q53ET0 693 aaPredicted RBP3.18□□□□□ -1.9
AC025539.1-201ENST00000515343 C1orf53Q5VUE5 145 aa3.18□□□□□ -1.9
AC025539.1-201ENST00000515343 CYP2U1Q7Z449 544 aa3.18□□□□□ -1.9
AC025539.1-201ENST00000515343 KDF1Q8NAX2 398 aaPredicted RBP3.18□□□□□ -1.9
AC025539.1-201ENST00000515343 MYO19Q96H55 970 aa3.18□□□□□ -1.9
AC025539.1-201ENST00000515343 PPEF1O14829 653 aaPredicted RBP3.17□□□□□ -1.9
AC025539.1-201ENST00000515343 PTCD1O75127 700 aaKnown RBP3.17□□□□□ -1.9
AC025539.1-201ENST00000515343 TEAD4Q15561 434 aa3.17□□□□□ -1.9
AC025539.1-201ENST00000515343 TSGA10IPQ3SY00 556 aa3.17□□□□□ -1.9
AC025539.1-201ENST00000515343 TRIM67Q6ZTA4 783 aa3.17□□□□□ -1.9
AC025539.1-201ENST00000515343 TSC1Q92574 1164 aa3.17□□□□□ -1.9
AC025539.1-201ENST00000515343 EMILIN1Q9Y6C2 1016 aa3.17□□□□□ -1.9
AC025539.1-201ENST00000515343 INHAP05111 366 aa3.17□□□□□ -1.9
AC025539.1-201ENST00000515343 LAPTM4AQ15012 233 aa3.17□□□□□ -1.9
AC025539.1-201ENST00000515343 ESCO1Q5FWF5 840 aa3.17□□□□□ -1.9
AC025539.1-201ENST00000515343 IQSEC3Q9UPP2 1182 aaPredicted RBP3.17□□□□□ -1.9
AC025539.1-201ENST00000515343 SEC13P55735 322 aa3.17□□□□□ -1.9
AC025539.1-201ENST00000515343 MYT1Q01538 1121 aa3.17□□□□□ -1.9
AC025539.1-201ENST00000515343 GRIP2Q9C0E4 1043 aa3.17□□□□□ -1.9
AC025539.1-201ENST00000515343 PGPEP1Q9NXJ5 209 aa3.17□□□□□ -1.9
AC025539.1-201ENST00000515343 BACH1O14867 736 aa3.16□□□□□ -1.9
AC025539.1-201ENST00000515343 ZNF358Q9NW07 568 aa3.16□□□□□ -1.9
AC025539.1-201ENST00000515343 ARID4AP29374 1257 aaPredicted RBP3.16□□□□□ -1.9
AC025539.1-201ENST00000515343 RGS22Q8NE09 1264 aa3.16□□□□□ -1.9
AC025539.1-201ENST00000515343 SMPD1P17405 629 aa3.16□□□□□ -1.9
AC025539.1-201ENST00000515343 GTF2IP78347 998 aa3.16□□□□□ -1.9
AC025539.1-201ENST00000515343 CCDC116Q8IYX3 515 aa3.16□□□□□ -1.9
AC025539.1-201ENST00000515343 OGFOD1Q8N543 542 aa3.16□□□□□ -1.9
AC025539.1-201ENST00000515343 MRGPRX2Q96LB1 330 aa3.16□□□□□ -1.9
AC025539.1-201ENST00000515343 ATP1B4Q9UN42 357 aaPredicted RBP3.16□□□□□ -1.9
AC025539.1-201ENST00000515343 DGAT1O75907 488 aa3.16□□□□□ -1.9
AC025539.1-201ENST00000515343 ADH1AP07327 375 aa3.16□□□□□ -1.9
AC025539.1-201ENST00000515343 CTC1Q2NKJ3 1217 aa3.16□□□□□ -1.9
AC025539.1-201ENST00000515343 CCDC24Q8N4L8 307 aa3.16□□□□□ -1.9
AC025539.1-201ENST00000515343 POTECB2RU33 542 aa3.15□□□□□ -1.9
AC025539.1-201ENST00000515343 MYCP01106 439 aaPredicted RBP3.15□□□□□ -1.9
AC025539.1-201ENST00000515343 VAMP1P23763 118 aa3.15□□□□□ -1.9
AC025539.1-201ENST00000515343 SND1Q7KZF4 910 aaKnown RBP eCLIP3.15□□□□□ -1.9
AC025539.1-201ENST00000515343 NISCHQ9Y2I1 1504 aa3.15□□□□□ -1.91
AC025539.1-201ENST00000515343 LBRQ14739 615 aaKnown RBP3.15□□□□□ -1.91
AC025539.1-201ENST00000515343 VASH1Q7L8A9 365 aaPredicted RBP3.15□□□□□ -1.91
AC025539.1-201ENST00000515343 CITED4Q96RK1 184 aa3.15□□□□□ -1.91
AC025539.1-201ENST00000515343 KIAA1024Q9UPX6 916 aa3.15□□□□□ -1.91
AC025539.1-201ENST00000515343 PTGIRP43119 386 aa3.15□□□□□ -1.91
AC025539.1-201ENST00000515343 SMTNP53814 917 aa3.15□□□□□ -1.91
AC025539.1-201ENST00000515343 TRIM26Q12899 539 aaPredicted RBP3.15□□□□□ -1.91
AC025539.1-201ENST00000515343 STK32AQ8WU08 396 aa3.15□□□□□ -1.91
AC025539.1-201ENST00000515343 SHROOM4Q9ULL8 1493 aa3.14□□□□□ -1.91
AC025539.1-201ENST00000515343 EML1O00423 815 aa3.14□□□□□ -1.91
AC025539.1-201ENST00000515343 NR3C2P08235 984 aa3.14□□□□□ -1.91
AC025539.1-201ENST00000515343 ESYT1Q9BSJ8 1104 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms