RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 EVA1CP58658 441 aa9.62□□□□□ -0.87
SMAD1-213ENST00000514778 CHRNA2Q15822 529 aa9.62□□□□□ -0.87
SMAD1-213ENST00000514778 IER5LQ5T953 404 aa9.62□□□□□ -0.87
SMAD1-213ENST00000514778 MAMSTRQ6ZN01 415 aa9.62□□□□□ -0.87
SMAD1-213ENST00000514778 QTRT2Q9H974 415 aaKnown RBP9.62□□□□□ -0.87
SMAD1-213ENST00000514778 TRIM35Q9UPQ4 493 aa9.62□□□□□ -0.87
SMAD1-213ENST00000514778 THRAP3Q9Y2W1 955 aaKnown RBP9.62□□□□□ -0.87
SMAD1-213ENST00000514778 COL18A1P39060 1754 aa9.62□□□□□ -0.87
SMAD1-213ENST00000514778 INSRP06213 1382 aa9.62□□□□□ -0.87
SMAD1-213ENST00000514778 PLCH1Q4KWH8 1693 aa9.61□□□□□ -0.87
SMAD1-213ENST00000514778 WDR17Q8IZU2 1322 aa9.61□□□□□ -0.87
SMAD1-213ENST00000514778 COL5A2P05997 1499 aaPredicted RBP9.61□□□□□ -0.87
SMAD1-213ENST00000514778 SOX12O15370 315 aa9.61□□□□□ -0.87
SMAD1-213ENST00000514778 ONECUT3O60422 494 aaPredicted RBP9.61□□□□□ -0.87
SMAD1-213ENST00000514778 HOXC9P31274 260 aa9.61□□□□□ -0.87
SMAD1-213ENST00000514778 RBM6P78332 1123 aaKnown RBP9.61□□□□□ -0.87
SMAD1-213ENST00000514778 RALBP1Q15311 655 aa9.61□□□□□ -0.87
SMAD1-213ENST00000514778 IFNLR1Q8IU57 520 aaPredicted RBP9.61□□□□□ -0.87
SMAD1-213ENST00000514778 GJD4Q96KN9 370 aaPredicted RBP9.61□□□□□ -0.87
SMAD1-213ENST00000514778 PLSCR2Q9NRY7 297 aa9.61□□□□□ -0.87
SMAD1-213ENST00000514778 POLKQ9UBT6 870 aa9.61□□□□□ -0.87
SMAD1-213ENST00000514778 CDK12Q9NYV4 1490 aaPredicted RBP9.6□□□□□ -0.87
SMAD1-213ENST00000514778 NRAPQ86VF7 1730 aa9.6□□□□□ -0.87
SMAD1-213ENST00000514778 CRB1P82279 1406 aa9.6□□□□□ -0.87
SMAD1-213ENST00000514778 RXRBP28702 533 aa9.6□□□□□ -0.87
SMAD1-213ENST00000514778 CC2D1BQ5T0F9 858 aaKnown RBP9.6□□□□□ -0.87
SMAD1-213ENST00000514778 TMEM106CQ9BVX2 250 aa9.6□□□□□ -0.87
SMAD1-213ENST00000514778 AXIN2Q9Y2T1 843 aa9.6□□□□□ -0.87
SMAD1-213ENST00000514778 PARD3Q8TEW0 1356 aa9.6□□□□□ -0.87
SMAD1-213ENST00000514778 ERBB3P21860 1342 aa9.59□□□□□ -0.87
SMAD1-213ENST00000514778 SPATA31A5Q5VU36 1347 aa9.59□□□□□ -0.87
SMAD1-213ENST00000514778 SPATA31A7Q8IWB4 1347 aa9.59□□□□□ -0.87
SMAD1-213ENST00000514778 POTEFA5A3E0 1075 aa9.59□□□□□ -0.87
SMAD1-213ENST00000514778 RRS1Q15050 365 aaKnown RBP9.59□□□□□ -0.87
SMAD1-213ENST00000514778 BARGINQ6ZT62 677 aa9.59□□□□□ -0.87
SMAD1-213ENST00000514778 SPOCK2Q92563 424 aa9.59□□□□□ -0.87
SMAD1-213ENST00000514778 CDCA7Q9BWT1 371 aaPredicted RBP9.59□□□□□ -0.87
SMAD1-213ENST00000514778 CARD10Q9BWT7 1032 aa9.59□□□□□ -0.87
SMAD1-213ENST00000514778 LTN1O94822 1766 aa9.59□□□□□ -0.87
SMAD1-213ENST00000514778 SPATA31A1Q5TZJ5 1347 aa9.58□□□□□ -0.88
SMAD1-213ENST00000514778 POTEJP0CG39 1038 aa9.58□□□□□ -0.88
SMAD1-213ENST00000514778 CHRM1P11229 460 aaPredicted RBP9.58□□□□□ -0.88
SMAD1-213ENST00000514778 POTEAQ6S8J7 498 aa9.58□□□□□ -0.88
SMAD1-213ENST00000514778 ANKRD24Q8TF21 1146 aa9.58□□□□□ -0.88
SMAD1-213ENST00000514778 PLEKHG2Q9H7P9 1386 aa9.58□□□□□ -0.88
SMAD1-213ENST00000514778 FAM208AQ9UK61 1670 aaKnown RBP9.58□□□□□ -0.88
SMAD1-213ENST00000514778 ZBTB7CA1YPR0 619 aa9.57□□□□□ -0.88
SMAD1-213ENST00000514778 SEC24BO95487 1268 aa9.57□□□□□ -0.88
SMAD1-213ENST00000514778 HSP90AB2PQ58FF8 381 aa9.57□□□□□ -0.88
SMAD1-213ENST00000514778 LARP1Q6PKG0 1096 aaKnown RBP9.57□□□□□ -0.88
SMAD1-213ENST00000514778 TOM1L2Q6ZVM7 507 aa9.57□□□□□ -0.88
SMAD1-213ENST00000514778 TCP11L2Q8N4U5 519 aa9.57□□□□□ -0.88
SMAD1-213ENST00000514778 STRN4Q9NRL3 753 aa9.57□□□□□ -0.88
SMAD1-213ENST00000514778 EMILIN1Q9Y6C2 1016 aa9.57□□□□□ -0.88
SMAD1-213ENST00000514778 CSB-PGBD3P0DP91 1061 aa9.56□□□□□ -0.88
SMAD1-213ENST00000514778 FBLN1P23142 703 aa9.56□□□□□ -0.88
SMAD1-213ENST00000514778 PPP2R1AP30153 589 aa9.56□□□□□ -0.88
SMAD1-213ENST00000514778 TNNT2P45379 298 aaPredicted RBP9.56□□□□□ -0.88
SMAD1-213ENST00000514778 MTHFSP49914 203 aa9.56□□□□□ -0.88
SMAD1-213ENST00000514778 ZNF467Q7Z7K2 595 aaPredicted RBP9.56□□□□□ -0.88
SMAD1-213ENST00000514778 CFAP53Q96M91 514 aa9.56□□□□□ -0.88
SMAD1-213ENST00000514778 SCUBE2Q9NQ36 999 aa9.56□□□□□ -0.88
SMAD1-213ENST00000514778 PCDHB8Q9UN66 801 aa9.56□□□□□ -0.88
SMAD1-213ENST00000514778 PPM1GO15355 546 aaPredicted RBP9.55□□□□□ -0.88
SMAD1-213ENST00000514778 PRKRIP1Q9H875 184 aaPredicted RBP9.55□□□□□ -0.88
SMAD1-213ENST00000514778 COLQQ9Y215 455 aaPredicted RBP9.55□□□□□ -0.88
SMAD1-213ENST00000514778 CCDC9Q9Y3X0 531 aaKnown RBP9.55□□□□□ -0.88
SMAD1-213ENST00000514778 PEAK1Q9H792 1746 aa9.55□□□□□ -0.88
SMAD1-213ENST00000514778 NCAPD2Q15021 1401 aa9.55□□□□□ -0.88
SMAD1-213ENST00000514778 MYBBP1AQ9BQG0 1328 aaKnown RBP9.55□□□□□ -0.88
SMAD1-213ENST00000514778 GLI3P10071 1580 aa9.54□□□□□ -0.88
SMAD1-213ENST00000514778 NLRP2Q9NX02 1062 aa9.54□□□□□ -0.88
SMAD1-213ENST00000514778 MAP2P11137 1827 aaKnown RBP9.54□□□□□ -0.88
SMAD1-213ENST00000514778 DIAPH1O60610 1272 aaKnown RBP9.53□□□□□ -0.88
SMAD1-213ENST00000514778 IL13P35225 146 aa9.53□□□□□ -0.88
SMAD1-213ENST00000514778 EIF4A2Q14240 407 aaKnown RBP9.53□□□□□ -0.88
SMAD1-213ENST00000514778 DISP2A7MBM2 1401 aa9.52□□□□□ -0.89
SMAD1-213ENST00000514778 ANP32CO43423 234 aa9.52□□□□□ -0.89
SMAD1-213ENST00000514778 IL2RBP14784 551 aa9.52□□□□□ -0.89
SMAD1-213ENST00000514778 FAM98CQ17RN3 349 aaKnown RBP9.52□□□□□ -0.89
SMAD1-213ENST00000514778 NBPF6Q5VWK0 638 aa9.52□□□□□ -0.89
SMAD1-213ENST00000514778 LTV1Q96GA3 475 aaPredicted RBP9.52□□□□□ -0.89
SMAD1-213ENST00000514778 NBPF4Q96M43 638 aa9.52□□□□□ -0.89
SMAD1-213ENST00000514778 NUDCQ9Y266 331 aa9.52□□□□□ -0.89
SMAD1-213ENST00000514778 IGSF1Q8N6C5 1336 aa9.52□□□□□ -0.89
SMAD1-213ENST00000514778 THSD7AQ9UPZ6 1657 aa9.51□□□□□ -0.89
SMAD1-213ENST00000514778 KDRP35968 1356 aa9.51□□□□□ -0.89
SMAD1-213ENST00000514778 SEPT12Q8IYM1 358 aa9.51□□□□□ -0.89
SMAD1-213ENST00000514778 RAPGEF4Q8WZA2 1011 aa9.51□□□□□ -0.89
SMAD1-213ENST00000514778 EYA1Q99502 592 aa9.51□□□□□ -0.89
SMAD1-213ENST00000514778 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.51□□□□□ -0.89
SMAD1-213ENST00000514778 COL3A1P02461 1466 aaPredicted RBP9.51□□□□□ -0.89
SMAD1-213ENST00000514778 RGPD5Q99666 1765 aa9.5□□□□□ -0.89
SMAD1-213ENST00000514778 RGS12O14924 1447 aa9.5□□□□□ -0.89
SMAD1-213ENST00000514778 EXOC5O00471 708 aa9.5□□□□□ -0.89
SMAD1-213ENST00000514778 USP35Q9P2H5 1018 aa9.5□□□□□ -0.89
SMAD1-213ENST00000514778 PARP4Q9UKK3 1724 aaKnown RBP9.5□□□□□ -0.89
SMAD1-213ENST00000514778 BCL9O00512 1426 aa9.49□□□□□ -0.89
SMAD1-213ENST00000514778 TATP17735 454 aaPredicted RBP9.49□□□□□ -0.89
SMAD1-213ENST00000514778 DDB1Q16531 1140 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms