RNA–Protein interactions for RNA: ENST00000514168.1

SMAD1-212, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-212ENST00000514168 SLC15A2Q16348 729 aa16.09■□□□□ 0.17
SMAD1-212ENST00000514168 EXOC5O00471 708 aa16.08■□□□□ 0.16
SMAD1-212ENST00000514168 RALBP1Q15311 655 aa16.08■□□□□ 0.16
SMAD1-212ENST00000514168 ATF5Q9Y2D1 282 aaPredicted RBP16.08■□□□□ 0.16
SMAD1-212ENST00000514168 ERBB3P21860 1342 aa16.08■□□□□ 0.16
SMAD1-212ENST00000514168 CSB-PGBD3P0DP91 1061 aa16.07■□□□□ 0.16
SMAD1-212ENST00000514168 PRKRIP1Q9H875 184 aaPredicted RBP16.07■□□□□ 0.16
SMAD1-212ENST00000514168 QSER1Q2KHR3 1735 aa16.07■□□□□ 0.16
SMAD1-212ENST00000514168 TNNT2P45379 298 aaPredicted RBP16.06■□□□□ 0.16
SMAD1-212ENST00000514168 STK32BQ9NY57 414 aa16.06■□□□□ 0.16
SMAD1-212ENST00000514168 TUBGCP6Q96RT7 1819 aa16.05■□□□□ 0.16
SMAD1-212ENST00000514168 SYT17Q9BSW7 474 aa16.05■□□□□ 0.16
SMAD1-212ENST00000514168 FHDC1Q9C0D6 1143 aaPredicted RBP16.04■□□□□ 0.16
SMAD1-212ENST00000514168 MTFR1LQ9H019 292 aa16.04■□□□□ 0.16
SMAD1-212ENST00000514168 SHANK3Q9BYB0 1731 aa16.04■□□□□ 0.16
SMAD1-212ENST00000514168 ZNF827Q17R98 1081 aa16.03■□□□□ 0.16
SMAD1-212ENST00000514168 ACSBG1Q96GR2 724 aa16.03■□□□□ 0.16
SMAD1-212ENST00000514168 LRRC4BQ9NT99 713 aa16.03■□□□□ 0.16
SMAD1-212ENST00000514168 RGPD2P0DJD1 1756 aa16.03■□□□□ 0.16
SMAD1-212ENST00000514168 MYBBP1AQ9BQG0 1328 aaKnown RBP16.02■□□□□ 0.16
SMAD1-212ENST00000514168 FBLN1P23142 703 aa16.02■□□□□ 0.16
SMAD1-212ENST00000514168 PPP2R1AP30153 589 aa16.02■□□□□ 0.16
SMAD1-212ENST00000514168 ZNF784Q8NCA9 323 aaPredicted RBP16.02■□□□□ 0.16
SMAD1-212ENST00000514168 FAM208AQ9UK61 1670 aaKnown RBP16.02■□□□□ 0.15
SMAD1-212ENST00000514168 UTRNP46939 3433 aa16.01■□□□□ 0.15
SMAD1-212ENST00000514168 MAP3K5Q99683 1374 aa16.01■□□□□ 0.15
SMAD1-212ENST00000514168 MAP3K19Q56UN5 1328 aa16.01■□□□□ 0.15
SMAD1-212ENST00000514168 IL2RBP14784 551 aa16.01■□□□□ 0.15
SMAD1-212ENST00000514168 RRS1Q15050 365 aaKnown RBP16.01■□□□□ 0.15
SMAD1-212ENST00000514168 POLKQ9UBT6 870 aa16.01■□□□□ 0.15
SMAD1-212ENST00000514168 LY75O60449 1722 aa16■□□□□ 0.15
SMAD1-212ENST00000514168 DCAF8L1A6NGE4 600 aa16■□□□□ 0.15
SMAD1-212ENST00000514168 ANKRD24Q8TF21 1146 aa16■□□□□ 0.15
SMAD1-212ENST00000514168 NLRP2Q9NX02 1062 aa16■□□□□ 0.15
SMAD1-212ENST00000514168 KIF24Q5T7B8 1368 aa16■□□□□ 0.15
SMAD1-212ENST00000514168 AMPHP49418 695 aa15.99■□□□□ 0.15
SMAD1-212ENST00000514168 EMILIN1Q9Y6C2 1016 aa15.99■□□□□ 0.15
SMAD1-212ENST00000514168 SMG6Q86US8 1419 aaKnown RBP15.99■□□□□ 0.15
SMAD1-212ENST00000514168 PPM1GO15355 546 aaPredicted RBP15.98■□□□□ 0.15
SMAD1-212ENST00000514168 MTHFSP49914 203 aa15.98■□□□□ 0.15
SMAD1-212ENST00000514168 DOT1LQ8TEK3 1739 aa15.98■□□□□ 0.15
SMAD1-212ENST00000514168 AKT1S1Q96B36 256 aa15.98■□□□□ 0.15
SMAD1-212ENST00000514168 RTL1A6NKG5 1358 aa15.98■□□□□ 0.15
SMAD1-212ENST00000514168 FLT4P35916 1363 aa15.97■□□□□ 0.15
SMAD1-212ENST00000514168 IP6K1Q92551 441 aa15.96■□□□□ 0.15
SMAD1-212ENST00000514168 ARXQ96QS3 562 aa15.96■□□□□ 0.15
SMAD1-212ENST00000514168 HOXC9P31274 260 aa15.95■□□□□ 0.14
SMAD1-212ENST00000514168 CFAP53Q96M91 514 aa15.95■□□□□ 0.14
SMAD1-212ENST00000514168 INSRP06213 1382 aa15.94■□□□□ 0.14
SMAD1-212ENST00000514168 PNPLA7Q6ZV29 1317 aa15.94■□□□□ 0.14
SMAD1-212ENST00000514168 MIER1Q8N108 512 aa15.93■□□□□ 0.14
SMAD1-212ENST00000514168 HSP90AB2PQ58FF8 381 aa15.92■□□□□ 0.14
SMAD1-212ENST00000514168 MEGF6O75095 1541 aa15.92■□□□□ 0.14
SMAD1-212ENST00000514168 KCNQ4P56696 695 aa15.91■□□□□ 0.14
SMAD1-212ENST00000514168 SLC27A3Q5K4L6 730 aa15.91■□□□□ 0.14
SMAD1-212ENST00000514168 SLC16A10Q8TF71 515 aa15.9■□□□□ 0.14
SMAD1-212ENST00000514168 COL3A1P02461 1466 aaPredicted RBP15.9■□□□□ 0.14
SMAD1-212ENST00000514168 CCER2I3L3R5 266 aa15.89■□□□□ 0.13
SMAD1-212ENST00000514168 DIAPH1O60610 1272 aaKnown RBP15.89■□□□□ 0.13
SMAD1-212ENST00000514168 DDX54Q8TDD1 881 aaKnown RBP15.89■□□□□ 0.13
SMAD1-212ENST00000514168 LTV1Q96GA3 475 aaPredicted RBP15.89■□□□□ 0.13
SMAD1-212ENST00000514168 TAF1LQ8IZX4 1826 aa15.89■□□□□ 0.13
SMAD1-212ENST00000514168 PRIM1P49642 420 aaKnown RBP15.88■□□□□ 0.13
SMAD1-212ENST00000514168 EIF4A2Q14240 407 aaKnown RBP15.88■□□□□ 0.13
SMAD1-212ENST00000514168 MRS2Q9HD23 443 aa15.88■□□□□ 0.13
SMAD1-212ENST00000514168 CCDC184Q52MB2 194 aa15.87■□□□□ 0.13
SMAD1-212ENST00000514168 NUDCQ9Y266 331 aa15.87■□□□□ 0.13
SMAD1-212ENST00000514168 IL13P35225 146 aa15.86■□□□□ 0.13
SMAD1-212ENST00000514168 C1QTNF8P60827 252 aa15.86■□□□□ 0.13
SMAD1-212ENST00000514168 NLGN2Q8NFZ4 835 aa15.86■□□□□ 0.13
SMAD1-212ENST00000514168 C5P01031 1676 aa15.86■□□□□ 0.13
SMAD1-212ENST00000514168 GOLGB1Q14789 3259 aaKnown RBP15.85■□□□□ 0.13
SMAD1-212ENST00000514168 TOGARAM1Q9Y4F4 1720 aa15.85■□□□□ 0.13
SMAD1-212ENST00000514168 ITGB4P16144 1822 aa15.84■□□□□ 0.13
SMAD1-212ENST00000514168 NBPF6Q5VWK0 638 aa15.84■□□□□ 0.13
SMAD1-212ENST00000514168 NBPF4Q96M43 638 aa15.84■□□□□ 0.13
SMAD1-212ENST00000514168 U2SURPO15042 1029 aaKnown RBP15.83■□□□□ 0.12
SMAD1-212ENST00000514168 ZCRB1Q8TBF4 217 aaKnown RBP15.83■□□□□ 0.12
SMAD1-212ENST00000514168 YBX3P16989 372 aaKnown RBP eCLIP15.82■□□□□ 0.12
SMAD1-212ENST00000514168 WDR43Q15061 677 aaKnown RBP eCLIP15.82■□□□□ 0.12
SMAD1-212ENST00000514168 GPR162Q16538 588 aa15.82■□□□□ 0.12
SMAD1-212ENST00000514168 COL23A1Q86Y22 540 aaPredicted RBP15.82■□□□□ 0.12
SMAD1-212ENST00000514168 SYTL4Q96C24 671 aaPredicted RBP15.82■□□□□ 0.12
SMAD1-212ENST00000514168 EYA1Q99502 592 aa15.82■□□□□ 0.12
SMAD1-212ENST00000514168 TFCP2L1Q9NZI6 479 aa15.82■□□□□ 0.12
SMAD1-212ENST00000514168 U2AF1L5P0DN76 240 aaPredicted RBP15.81■□□□□ 0.12
SMAD1-212ENST00000514168 POLD1P28340 1107 aa15.81■□□□□ 0.12
SMAD1-212ENST00000514168 U2AF1Q01081 240 aaKnown RBP eCLIP15.81■□□□□ 0.12
SMAD1-212ENST00000514168 IGSF1Q8N6C5 1336 aa15.81■□□□□ 0.12
SMAD1-212ENST00000514168 CCNL1Q9UK58 526 aaPredicted RBP15.81■□□□□ 0.12
SMAD1-212ENST00000514168 UBR3Q6ZT12 1888 aa15.8■□□□□ 0.12
SMAD1-212ENST00000514168 PKD1L3Q7Z443 1732 aa15.8■□□□□ 0.12
SMAD1-212ENST00000514168 PNISRQ8TF01 805 aaKnown RBP15.8■□□□□ 0.12
SMAD1-212ENST00000514168 NCAPD2Q15021 1401 aa15.79■□□□□ 0.12
SMAD1-212ENST00000514168 SENP3-EIF4A1A0A087X0R7 540 aa15.79■□□□□ 0.12
SMAD1-212ENST00000514168 USHBP1Q8N6Y0 703 aa15.79■□□□□ 0.12
SMAD1-212ENST00000514168 C4BP0C0L5 1744 aa15.78■□□□□ 0.12
SMAD1-212ENST00000514168 SULT6B1Q6IMI4 303 aa15.78■□□□□ 0.12
SMAD1-212ENST00000514168 KLHL34Q8N239 644 aa15.78■□□□□ 0.12
SMAD1-212ENST00000514168 HMOX1P09601 288 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms