RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 KDF1Q8NAX2 398 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-218ENST00000513341 GALNT6Q8NCL4 622 aa7.69□□□□□ -1.18
PDLIM5-218ENST00000513341 TRIM52Q96A61 297 aa7.69□□□□□ -1.18
PDLIM5-218ENST00000513341 ZNF837Q96EG3 531 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-218ENST00000513341 TRIM66O15016 1216 aa7.68□□□□□ -1.18
PDLIM5-218ENST00000513341 RNF144AP50876 292 aaPredicted RBP7.68□□□□□ -1.18
PDLIM5-218ENST00000513341 NBPF20Q3BBV1 942 aa7.68□□□□□ -1.18
PDLIM5-218ENST00000513341 KRTAP9-2Q9BYQ4 174 aa7.68□□□□□ -1.18
PDLIM5-218ENST00000513341 ZNF395Q9H8N7 513 aaPredicted RBP7.68□□□□□ -1.18
PDLIM5-218ENST00000513341 LILRA1O75019 489 aa7.67□□□□□ -1.18
PDLIM5-218ENST00000513341 VSIG10Q8N0Z9 540 aa7.67□□□□□ -1.18
PDLIM5-218ENST00000513341 NEDD1Q8NHV4 660 aa7.67□□□□□ -1.18
PDLIM5-218ENST00000513341 ZC3H15Q8WU90 426 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-218ENST00000513341 SCRIBQ14160 1630 aa7.67□□□□□ -1.18
PDLIM5-218ENST00000513341 PTK2Q05397 1052 aa7.66□□□□□ -1.18
PDLIM5-218ENST00000513341 ZNF784Q8NCA9 323 aaPredicted RBP7.66□□□□□ -1.18
PDLIM5-218ENST00000513341 ACDQ96AP0 544 aa7.66□□□□□ -1.18
PDLIM5-218ENST00000513341 KRTAP9-6A0A140TA67 174 aa7.65□□□□□ -1.18
PDLIM5-218ENST00000513341 GPC1P35052 558 aa7.65□□□□□ -1.18
PDLIM5-218ENST00000513341 ADD1P35611 737 aaKnown RBP7.65□□□□□ -1.18
PDLIM5-218ENST00000513341 Q8N3U1 123 aa7.65□□□□□ -1.18
PDLIM5-218ENST00000513341 OCSTAMPQ9BR26 566 aa7.65□□□□□ -1.18
PDLIM5-218ENST00000513341 H7C1W4 665 aa7.64□□□□□ -1.19
PDLIM5-218ENST00000513341 BAG6P46379 1132 aa7.64□□□□□ -1.19
PDLIM5-218ENST00000513341 PPP2R2DQ66LE6 453 aa7.64□□□□□ -1.19
PDLIM5-218ENST00000513341 NSFL1CQ9UNZ2 370 aaKnown RBP7.64□□□□□ -1.19
PDLIM5-218ENST00000513341 DYRK1BQ9Y463 629 aa7.64□□□□□ -1.19
PDLIM5-218ENST00000513341 ESPNB1AK53 854 aa7.63□□□□□ -1.19
PDLIM5-218ENST00000513341 OIP5O43482 229 aa7.63□□□□□ -1.19
PDLIM5-218ENST00000513341 CLK2P49760 499 aaKnown RBP7.63□□□□□ -1.19
PDLIM5-218ENST00000513341 CTDSPL2Q05D32 466 aa7.63□□□□□ -1.19
PDLIM5-218ENST00000513341 DBN1Q16643 649 aa7.63□□□□□ -1.19
PDLIM5-218ENST00000513341 AK7Q96M32 723 aa7.63□□□□□ -1.19
PDLIM5-218ENST00000513341 TMPRSS4Q9NRS4 437 aa7.63□□□□□ -1.19
PDLIM5-218ENST00000513341 ZCCHC6Q5VYS8 1495 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-218ENST00000513341 KRTAP1-3Q8IUG1 177 aa7.62□□□□□ -1.19
PDLIM5-218ENST00000513341 SEPT12Q8IYM1 358 aa7.62□□□□□ -1.19
PDLIM5-218ENST00000513341 RSPH6AQ9H0K4 717 aa7.62□□□□□ -1.19
PDLIM5-218ENST00000513341 ERVH48-1M5A8F1 160 aa7.61□□□□□ -1.19
PDLIM5-218ENST00000513341 ADAM32Q8TC27 787 aa7.61□□□□□ -1.19
PDLIM5-218ENST00000513341 TRERF1Q96PN7 1200 aa7.61□□□□□ -1.19
PDLIM5-218ENST00000513341 KRBA1A5PL33 1030 aa7.6□□□□□ -1.19
PDLIM5-218ENST00000513341 WDR44Q5JSH3 913 aa7.6□□□□□ -1.19
PDLIM5-218ENST00000513341 PRICKLE2Q7Z3G6 844 aa7.6□□□□□ -1.19
PDLIM5-218ENST00000513341 ERCC6Q03468 1493 aa7.6□□□□□ -1.19
PDLIM5-218ENST00000513341 GPR25O00155 361 aa7.59□□□□□ -1.19
PDLIM5-218ENST00000513341 MX2P20592 715 aa7.59□□□□□ -1.19
PDLIM5-218ENST00000513341 MAP2K3P46734 347 aa7.59□□□□□ -1.19
PDLIM5-218ENST00000513341 MKL2Q9ULH7 1088 aa7.59□□□□□ -1.19
PDLIM5-218ENST00000513341 CCDC125Q86Z20 511 aa7.58□□□□□ -1.2
PDLIM5-218ENST00000513341 LRRN4Q8WUT4 740 aa7.58□□□□□ -1.2
PDLIM5-218ENST00000513341 RHOQP17081 205 aa7.57□□□□□ -1.2
PDLIM5-218ENST00000513341 NR6A1Q15406 480 aa7.57□□□□□ -1.2
PDLIM5-218ENST00000513341 PNMA1Q8ND90 353 aa7.57□□□□□ -1.2
PDLIM5-218ENST00000513341 GTPBP3Q969Y2 492 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-218ENST00000513341 SNRPNP63162 240 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-218ENST00000513341 RIPOR1Q6ZS17 1223 aa7.56□□□□□ -1.2
PDLIM5-218ENST00000513341 CFHR5Q9BXR6 569 aa7.56□□□□□ -1.2
PDLIM5-218ENST00000513341 OXCT2Q9BYC2 517 aaPredicted RBP7.56□□□□□ -1.2
PDLIM5-218ENST00000513341 SPATA31C2B4DYI2 1134 aa7.55□□□□□ -1.2
PDLIM5-218ENST00000513341 ATP5J2-PTCD1G3V325 749 aa7.55□□□□□ -1.2
PDLIM5-218ENST00000513341 PDE4DQ08499 809 aa7.55□□□□□ -1.2
PDLIM5-218ENST00000513341 DZIP3Q86Y13 1208 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-218ENST00000513341 FURINP09958 794 aa7.54□□□□□ -1.2
PDLIM5-218ENST00000513341 COL8A1P27658 744 aa7.54□□□□□ -1.2
PDLIM5-218ENST00000513341 GDF2Q9UK05 429 aaPredicted RBP7.54□□□□□ -1.2
PDLIM5-218ENST00000513341 NCAPD3P42695 1498 aa7.54□□□□□ -1.2
PDLIM5-218ENST00000513341 PIK3R2O00459 728 aa7.53□□□□□ -1.2
PDLIM5-218ENST00000513341 GRIP2Q9C0E4 1043 aa7.53□□□□□ -1.2
PDLIM5-218ENST00000513341 SHISA8B8ZZ34 492 aa7.52□□□□□ -1.21
PDLIM5-218ENST00000513341 F11P03951 625 aa7.52□□□□□ -1.21
PDLIM5-218ENST00000513341 NBPF10Q6P3W6 841 aaKnown RBP7.52□□□□□ -1.21
PDLIM5-218ENST00000513341 NBPF15Q8N660 670 aa7.52□□□□□ -1.21
PDLIM5-218ENST00000513341 NUCKS1Q9H1E3 243 aaKnown RBP7.52□□□□□ -1.21
PDLIM5-218ENST00000513341 CYLDQ9NQC7 956 aa7.52□□□□□ -1.21
PDLIM5-218ENST00000513341 A0A1W2PRU2 124 aa7.51□□□□□ -1.21
PDLIM5-218ENST00000513341 RAB15P59190 212 aa7.51□□□□□ -1.21
PDLIM5-218ENST00000513341 POU4F2Q12837 409 aa7.51□□□□□ -1.21
PDLIM5-218ENST00000513341 GAS2L1Q99501 681 aaPredicted RBP7.51□□□□□ -1.21
PDLIM5-218ENST00000513341 POLR3EQ9NVU0 708 aa7.51□□□□□ -1.21
PDLIM5-218ENST00000513341 HOXB4P17483 251 aaPredicted RBP7.5□□□□□ -1.21
PDLIM5-218ENST00000513341 LINC00114Q6XXX2 140 aa7.5□□□□□ -1.21
PDLIM5-218ENST00000513341 KLRG1Q96E93 195 aa7.5□□□□□ -1.21
PDLIM5-218ENST00000513341 PHF24Q9UPV7 400 aa7.5□□□□□ -1.21
PDLIM5-218ENST00000513341 MEN1O00255 615 aa7.49□□□□□ -1.21
PDLIM5-218ENST00000513341 ERVK-9P63128 1117 aa7.49□□□□□ -1.21
PDLIM5-218ENST00000513341 CLN3Q13286 438 aa7.49□□□□□ -1.21
PDLIM5-218ENST00000513341 LBRQ14739 615 aaKnown RBP7.49□□□□□ -1.21
PDLIM5-218ENST00000513341 LCE3BQ5TA77 95 aa7.49□□□□□ -1.21
PDLIM5-218ENST00000513341 GOLGA6L1Q8N7Z2 621 aa7.49□□□□□ -1.21
PDLIM5-218ENST00000513341 EDARADDQ8WWZ3 215 aa7.49□□□□□ -1.21
PDLIM5-218ENST00000513341 SKIV2LQ15477 1246 aaKnown RBP7.48□□□□□ -1.21
PDLIM5-218ENST00000513341 SLC27A3Q5K4L6 730 aa7.48□□□□□ -1.21
PDLIM5-218ENST00000513341 C1orf229Q6ZS94 237 aaPredicted RBP7.48□□□□□ -1.21
PDLIM5-218ENST00000513341 NLRP3Q96P20 1036 aa7.48□□□□□ -1.21
PDLIM5-218ENST00000513341 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.48□□□□□ -1.21
PDLIM5-218ENST00000513341 THBS1P07996 1170 aa7.47□□□□□ -1.21
PDLIM5-218ENST00000513341 CC2D2BQ6DHV5 1058 aa7.47□□□□□ -1.21
PDLIM5-218ENST00000513341 TAS1R3Q7RTX0 852 aa7.47□□□□□ -1.21
PDLIM5-218ENST00000513341 TIMMDC1Q9NPL8 285 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms