RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 UNC5CLQ8IV45 518 aa10.22□□□□□ -0.77
HMGXB3-204ENST00000513318 KLHL34Q8N239 644 aa10.22□□□□□ -0.77
HMGXB3-204ENST00000513318 STRN4Q9NRL3 753 aa10.22□□□□□ -0.77
HMGXB3-204ENST00000513318 WDR17Q8IZU2 1322 aa10.22□□□□□ -0.77
HMGXB3-204ENST00000513318 DLG5Q8TDM6 1919 aa10.21□□□□□ -0.77
HMGXB3-204ENST00000513318 HSP90AB2PQ58FF8 381 aa10.21□□□□□ -0.77
HMGXB3-204ENST00000513318 DIEXFQ68CQ4 756 aaKnown RBP10.21□□□□□ -0.77
HMGXB3-204ENST00000513318 ANKRD24Q8TF21 1146 aa10.21□□□□□ -0.77
HMGXB3-204ENST00000513318 CFAP53Q96M91 514 aa10.21□□□□□ -0.77
HMGXB3-204ENST00000513318 TRPC5Q9UL62 973 aaPredicted RBP10.21□□□□□ -0.77
HMGXB3-204ENST00000513318 LRRC37A3O60309 1634 aa10.21□□□□□ -0.78
HMGXB3-204ENST00000513318 CSB-PGBD3P0DP91 1061 aa10.2□□□□□ -0.78
HMGXB3-204ENST00000513318 EVA1CP58658 441 aa10.2□□□□□ -0.78
HMGXB3-204ENST00000513318 NCAPD2Q15021 1401 aa10.2□□□□□ -0.78
HMGXB3-204ENST00000513318 VPS72Q15906 364 aa10.2□□□□□ -0.78
HMGXB3-204ENST00000513318 EIF4A2Q14240 407 aaKnown RBP10.19□□□□□ -0.78
HMGXB3-204ENST00000513318 TOM1L2Q6ZVM7 507 aa10.19□□□□□ -0.78
HMGXB3-204ENST00000513318 LTV1Q96GA3 475 aaPredicted RBP10.19□□□□□ -0.78
HMGXB3-204ENST00000513318 ZBTB47Q9UFB7 747 aaPredicted RBP10.19□□□□□ -0.78
HMGXB3-204ENST00000513318 SPATA31A1Q5TZJ5 1347 aa10.18□□□□□ -0.78
HMGXB3-204ENST00000513318 SPATA31A5Q5VU36 1347 aa10.18□□□□□ -0.78
HMGXB3-204ENST00000513318 SPATA31A7Q8IWB4 1347 aa10.18□□□□□ -0.78
HMGXB3-204ENST00000513318 DIAPH1O60610 1272 aaKnown RBP10.18□□□□□ -0.78
HMGXB3-204ENST00000513318 LARP1Q6PKG0 1096 aaKnown RBP10.18□□□□□ -0.78
HMGXB3-204ENST00000513318 POTEHQ6S545 545 aa10.18□□□□□ -0.78
HMGXB3-204ENST00000513318 SBF2Q86WG5 1849 aa10.17□□□□□ -0.78
HMGXB3-204ENST00000513318 IGSF1Q8N6C5 1336 aa10.17□□□□□ -0.78
HMGXB3-204ENST00000513318 GJD4Q96KN9 370 aaPredicted RBP10.17□□□□□ -0.78
HMGXB3-204ENST00000513318 CARD10Q9BWT7 1032 aa10.17□□□□□ -0.78
HMGXB3-204ENST00000513318 QTRT2Q9H974 415 aaKnown RBP10.17□□□□□ -0.78
HMGXB3-204ENST00000513318 NLRP2Q9NX02 1062 aa10.17□□□□□ -0.78
HMGXB3-204ENST00000513318 RGS17Q9UGC6 210 aaPredicted RBP10.17□□□□□ -0.78
HMGXB3-204ENST00000513318 THRAP3Q9Y2W1 955 aaKnown RBP10.17□□□□□ -0.78
HMGXB3-204ENST00000513318 CCDC9Q9Y3X0 531 aaKnown RBP10.17□□□□□ -0.78
HMGXB3-204ENST00000513318 DISP2A7MBM2 1401 aa10.16□□□□□ -0.78
HMGXB3-204ENST00000513318 KDRP35968 1356 aa10.16□□□□□ -0.78
HMGXB3-204ENST00000513318 PLEKHG2Q9H7P9 1386 aa10.16□□□□□ -0.78
HMGXB3-204ENST00000513318 IL13P35225 146 aa10.16□□□□□ -0.78
HMGXB3-204ENST00000513318 SCN11AQ9UI33 1791 aa10.16□□□□□ -0.78
HMGXB3-204ENST00000513318 RBM6P78332 1123 aaKnown RBP10.15□□□□□ -0.78
HMGXB3-204ENST00000513318 NBPF6Q5VWK0 638 aa10.15□□□□□ -0.78
HMGXB3-204ENST00000513318 BARGINQ6ZT62 677 aa10.15□□□□□ -0.78
HMGXB3-204ENST00000513318 TCP11L2Q8N4U5 519 aa10.15□□□□□ -0.78
HMGXB3-204ENST00000513318 SPOCK2Q92563 424 aa10.15□□□□□ -0.78
HMGXB3-204ENST00000513318 NBPF4Q96M43 638 aa10.15□□□□□ -0.78
HMGXB3-204ENST00000513318 EYA1Q99502 592 aa10.15□□□□□ -0.78
HMGXB3-204ENST00000513318 USP35Q9P2H5 1018 aa10.15□□□□□ -0.78
HMGXB3-204ENST00000513318 NUDCQ9Y266 331 aa10.15□□□□□ -0.78
HMGXB3-204ENST00000513318 MEGF6O75095 1541 aa10.15□□□□□ -0.78
HMGXB3-204ENST00000513318 TNS2Q63HR2 1409 aa10.15□□□□□ -0.79
HMGXB3-204ENST00000513318 ITGB4P16144 1822 aa10.14□□□□□ -0.79
HMGXB3-204ENST00000513318 NUBP1P53384 320 aa10.14□□□□□ -0.79
HMGXB3-204ENST00000513318 POTEAQ6S8J7 498 aa10.14□□□□□ -0.79
HMGXB3-204ENST00000513318 CDCA7Q9BWT1 371 aaPredicted RBP10.14□□□□□ -0.79
HMGXB3-204ENST00000513318 OVOS2A0A0G2JMS6 1433 aa10.14□□□□□ -0.79
HMGXB3-204ENST00000513318 DOT1LQ8TEK3 1739 aa10.13□□□□□ -0.79
HMGXB3-204ENST00000513318 U2SURPO15042 1029 aaKnown RBP10.13□□□□□ -0.79
HMGXB3-204ENST00000513318 IL2RBP14784 551 aa10.13□□□□□ -0.79
HMGXB3-204ENST00000513318 RXRBP28702 533 aa10.13□□□□□ -0.79
HMGXB3-204ENST00000513318 USHBP1Q8N6Y0 703 aa10.13□□□□□ -0.79
HMGXB3-204ENST00000513318 RGS12O14924 1447 aa10.13□□□□□ -0.79
HMGXB3-204ENST00000513318 CCER2I3L3R5 266 aa10.12□□□□□ -0.79
HMGXB3-204ENST00000513318 FAM98CQ17RN3 349 aaKnown RBP10.12□□□□□ -0.79
HMGXB3-204ENST00000513318 RAPGEF4Q8WZA2 1011 aa10.12□□□□□ -0.79
HMGXB3-204ENST00000513318 MRS2Q9HD23 443 aa10.12□□□□□ -0.79
HMGXB3-204ENST00000513318 TOGARAM1Q9Y4F4 1720 aa10.11□□□□□ -0.79
HMGXB3-204ENST00000513318 ONECUT3O60422 494 aaPredicted RBP10.11□□□□□ -0.79
HMGXB3-204ENST00000513318 U2AF1L5P0DN76 240 aaPredicted RBP10.11□□□□□ -0.79
HMGXB3-204ENST00000513318 TATP17735 454 aaPredicted RBP10.11□□□□□ -0.79
HMGXB3-204ENST00000513318 U2AF1Q01081 240 aaKnown RBP eCLIP10.11□□□□□ -0.79
HMGXB3-204ENST00000513318 WDR43Q15061 677 aaKnown RBP eCLIP10.11□□□□□ -0.79
HMGXB3-204ENST00000513318 SULT6B1Q6IMI4 303 aa10.11□□□□□ -0.79
HMGXB3-204ENST00000513318 RASEFQ8IZ41 740 aa10.11□□□□□ -0.79
HMGXB3-204ENST00000513318 ADAMTS7Q9UKP4 1686 aa10.1□□□□□ -0.79
HMGXB3-204ENST00000513318 A0A0G2JS52 829 aa10.1□□□□□ -0.79
HMGXB3-204ENST00000513318 HMOX1P09601 288 aa10.1□□□□□ -0.79
HMGXB3-204ENST00000513318 MYT1Q01538 1121 aa10.1□□□□□ -0.79
HMGXB3-204ENST00000513318 CCDC184Q52MB2 194 aa10.1□□□□□ -0.79
HMGXB3-204ENST00000513318 AEBP1Q8IUX7 1158 aa10.1□□□□□ -0.79
HMGXB3-204ENST00000513318 SIPA1L3O60292 1781 aaPredicted RBP10.1□□□□□ -0.79
HMGXB3-204ENST00000513318 NHSQ6T4R5 1651 aa10.09□□□□□ -0.79
HMGXB3-204ENST00000513318 FCHSD2O94868 740 aa10.09□□□□□ -0.79
HMGXB3-204ENST00000513318 RSPH6AQ9H0K4 717 aa10.09□□□□□ -0.79
HMGXB3-204ENST00000513318 TNS1Q9HBL0 1735 aaKnown RBP10.08□□□□□ -0.8
HMGXB3-204ENST00000513318 BTAF1O14981 1849 aa10.08□□□□□ -0.8
HMGXB3-204ENST00000513318 DDB1Q16531 1140 aa10.08□□□□□ -0.8
HMGXB3-204ENST00000513318 SEPT12Q8IYM1 358 aa10.08□□□□□ -0.8
HMGXB3-204ENST00000513318 PNNQ9H307 717 aaKnown RBP10.08□□□□□ -0.8
HMGXB3-204ENST00000513318 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.08□□□□□ -0.87e-9■■□□□ 12.6
HMGXB3-204ENST00000513318 PCDH11XQ9BZA7 1347 aa10.07□□□□□ -0.8
HMGXB3-204ENST00000513318 PCDH11YQ9BZA8 1340 aa10.07□□□□□ -0.8
HMGXB3-204ENST00000513318 C19orf67A6NJJ6 358 aa10.07□□□□□ -0.8
HMGXB3-204ENST00000513318 EXOC5O00471 708 aa10.07□□□□□ -0.8
HMGXB3-204ENST00000513318 NEFMP07197 916 aa10.07□□□□□ -0.8
HMGXB3-204ENST00000513318 PRKAR2BP31323 418 aa10.07□□□□□ -0.8
HMGXB3-204ENST00000513318 AMOTQ4VCS5 1084 aa10.07□□□□□ -0.8
HMGXB3-204ENST00000513318 PNISRQ8TF01 805 aaKnown RBP10.07□□□□□ -0.8
HMGXB3-204ENST00000513318 SPG7Q9UQ90 795 aa10.07□□□□□ -0.8
HMGXB3-204ENST00000513318 PLEKHO1Q53GL0 409 aaPredicted RBP10.06□□□□□ -0.8
HMGXB3-204ENST00000513318 ZCRB1Q8TBF4 217 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms