RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 KRT27Q7Z3Y8 459 aa22.06■■□□□ 1.12
HMGCL-209ENST00000513148 AEBP1Q8IUX7 1158 aa22.06■■□□□ 1.12
HMGCL-209ENST00000513148 FAM182BQ5T319 152 aa22.06■■□□□ 1.12
HMGCL-209ENST00000513148 PDE3BQ13370 1112 aa22.05■■□□□ 1.12
HMGCL-209ENST00000513148 SULT6B1Q6IMI4 303 aa22.05■■□□□ 1.12
HMGCL-209ENST00000513148 TNS2Q63HR2 1409 aa22.04■■□□□ 1.12
HMGCL-209ENST00000513148 HMOX1P09601 288 aa22.04■■□□□ 1.12
HMGCL-209ENST00000513148 OVOS2A0A0G2JMS6 1433 aa22.04■■□□□ 1.12
HMGCL-209ENST00000513148 EXOC5O00471 708 aa22.04■■□□□ 1.12
HMGCL-209ENST00000513148 TATP17735 454 aaPredicted RBP22.04■■□□□ 1.12
HMGCL-209ENST00000513148 TSHZ2Q9NRE2 1034 aa22.02■■□□□ 1.12
HMGCL-209ENST00000513148 NUDCQ9Y266 331 aa22.02■■□□□ 1.12
HMGCL-209ENST00000513148 SHANK3Q9BYB0 1731 aa22.02■■□□□ 1.12
HMGCL-209ENST00000513148 KDRP35968 1356 aa22■■□□□ 1.11
HMGCL-209ENST00000513148 PKD1L3Q7Z443 1732 aa21.99■■□□□ 1.11
HMGCL-209ENST00000513148 U2AF1L5P0DN76 240 aaPredicted RBP21.99■■□□□ 1.11
HMGCL-209ENST00000513148 U2AF1Q01081 240 aaKnown RBP eCLIP21.99■■□□□ 1.11
HMGCL-209ENST00000513148 DDX54Q8TDD1 881 aaKnown RBP21.99■■□□□ 1.11
HMGCL-209ENST00000513148 ZCRB1Q8TBF4 217 aaKnown RBP21.99■■□□□ 1.11
HMGCL-209ENST00000513148 MARCH10Q8NA82 808 aaPredicted RBP21.97■■□□□ 1.11
HMGCL-209ENST00000513148 CCDC184Q52MB2 194 aa21.96■■□□□ 1.11
HMGCL-209ENST00000513148 PCDH11XQ9BZA7 1347 aa21.94■■□□□ 1.1
HMGCL-209ENST00000513148 PCDH11YQ9BZA8 1340 aa21.94■■□□□ 1.1
HMGCL-209ENST00000513148 SPG7Q9UQ90 795 aa21.94■■□□□ 1.1
HMGCL-209ENST00000513148 PRKAR2BP31323 418 aa21.92■■□□□ 1.1
HMGCL-209ENST00000513148 RSPH6AQ9H0K4 717 aa21.92■■□□□ 1.1
HMGCL-209ENST00000513148 FAM196AQ6ZSG2 479 aa21.91■■□□□ 1.1
HMGCL-209ENST00000513148 MRS2Q9HD23 443 aa21.91■■□□□ 1.1
HMGCL-209ENST00000513148 CYP27B1O15528 508 aa21.9■■□□□ 1.1
HMGCL-209ENST00000513148 WDR43Q15061 677 aaKnown RBP eCLIP21.9■■□□□ 1.1
HMGCL-209ENST00000513148 PLEKHO1Q53GL0 409 aaPredicted RBP21.9■■□□□ 1.1
HMGCL-209ENST00000513148 SBF2Q86WG5 1849 aa21.9■■□□□ 1.1
HMGCL-209ENST00000513148 ZNF530Q6P9A1 599 aaPredicted RBP21.89■■□□□ 1.1
HMGCL-209ENST00000513148 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.89■■□□□ 1.1
HMGCL-209ENST00000513148 DOT1LQ8TEK3 1739 aa21.89■■□□□ 1.1
HMGCL-209ENST00000513148 KAT6BQ8WYB5 2073 aa21.89■■□□□ 1.09
HMGCL-209ENST00000513148 AMOTQ4VCS5 1084 aa21.89■■□□□ 1.09
HMGCL-209ENST00000513148 PLEKHG2Q9H7P9 1386 aa21.88■■□□□ 1.09
HMGCL-209ENST00000513148 FCHSD2O94868 740 aa21.88■■□□□ 1.09
HMGCL-209ENST00000513148 ACSBG1Q96GR2 724 aa21.88■■□□□ 1.09
HMGCL-209ENST00000513148 TRIM37O94972 964 aa21.87■■□□□ 1.09
HMGCL-209ENST00000513148 PHKG2P15735 406 aa21.86■■□□□ 1.09
HMGCL-209ENST00000513148 MTHFSDQ2M296 383 aaKnown RBP21.86■■□□□ 1.09
HMGCL-209ENST00000513148 IFNL2Q8IZJ0 200 aa21.86■■□□□ 1.09
HMGCL-209ENST00000513148 PHACTR3Q96KR7 559 aa21.86■■□□□ 1.09
HMGCL-209ENST00000513148 C1orf141Q5JVX7 400 aa21.85■■□□□ 1.09
HMGCL-209ENST00000513148 UPF1Q92900 1129 aaKnown RBP eCLIP21.85■■□□□ 1.09
HMGCL-209ENST00000513148 ADAMTS8Q9UP79 889 aa21.85■■□□□ 1.09
HMGCL-209ENST00000513148 TOGARAM1Q9Y4F4 1720 aa21.84■■□□□ 1.09
HMGCL-209ENST00000513148 TNS1Q9HBL0 1735 aaKnown RBP21.84■■□□□ 1.09
HMGCL-209ENST00000513148 BCL9O00512 1426 aa21.84■■□□□ 1.09
HMGCL-209ENST00000513148 NHSQ6T4R5 1651 aa21.84■■□□□ 1.09
HMGCL-209ENST00000513148 SYTL4Q96C24 671 aaPredicted RBP21.84■■□□□ 1.09
HMGCL-209ENST00000513148 KCNQ2O43526 872 aa21.83■■□□□ 1.09
HMGCL-209ENST00000513148 PTF1AQ7RTS3 328 aa21.83■■□□□ 1.09
HMGCL-209ENST00000513148 CCDC146Q8IYE0 955 aa21.83■■□□□ 1.09
HMGCL-209ENST00000513148 NEFMP07197 916 aa21.82■■□□□ 1.08
HMGCL-209ENST00000513148 SOCS7O14512 581 aa21.82■■□□□ 1.08
HMGCL-209ENST00000513148 MAPK8IP3Q9UPT6 1336 aa21.81■■□□□ 1.08
HMGCL-209ENST00000513148 PLEKHF1Q96S99 279 aa21.81■■□□□ 1.08
HMGCL-209ENST00000513148 VIRMAQ69YN4 1812 aaKnown RBP21.81■■□□□ 1.08
HMGCL-209ENST00000513148 GAS2L2Q8NHY3 880 aa21.8■■□□□ 1.08
HMGCL-209ENST00000513148 SF3B2Q13435 895 aaKnown RBP21.8■■□□□ 1.08
HMGCL-209ENST00000513148 AKAP4Q5JQC9 854 aa21.8■■□□□ 1.08
HMGCL-209ENST00000513148 MPRIPQ6WCQ1 1025 aa21.8■■□□□ 1.08
HMGCL-209ENST00000513148 PNNQ9H307 717 aaKnown RBP21.8■■□□□ 1.08
HMGCL-209ENST00000513148 ITGB4P16144 1822 aa21.79■■□□□ 1.08
HMGCL-209ENST00000513148 PRIM1P49642 420 aaKnown RBP21.79■■□□□ 1.08
HMGCL-209ENST00000513148 NKX1-1Q15270 411 aaPredicted RBP21.79■■□□□ 1.08
HMGCL-209ENST00000513148 KDM6AO15550 1401 aaPredicted RBP21.79■■□□□ 1.08
HMGCL-209ENST00000513148 PNISRQ8TF01 805 aaKnown RBP21.79■■□□□ 1.08
HMGCL-209ENST00000513148 BTAF1O14981 1849 aa21.78■■□□□ 1.08
HMGCL-209ENST00000513148 HSP90AB1P08238 724 aaKnown RBP21.78■■□□□ 1.08
HMGCL-209ENST00000513148 DLG5Q8TDM6 1919 aa21.77■■□□□ 1.08
HMGCL-209ENST00000513148 BCL11BQ9C0K0 894 aaPredicted RBP21.77■■□□□ 1.08
HMGCL-209ENST00000513148 SCN11AQ9UI33 1791 aa21.77■■□□□ 1.08
HMGCL-209ENST00000513148 MAP3K5Q99683 1374 aa21.77■■□□□ 1.08
HMGCL-209ENST00000513148 DCAF5Q96JK2 942 aa21.77■■□□□ 1.07
HMGCL-209ENST00000513148 APBA3O96018 575 aa21.76■■□□□ 1.07
HMGCL-209ENST00000513148 FAM9BQ8IZU0 186 aa21.76■■□□□ 1.07
HMGCL-209ENST00000513148 CCDC125Q86Z20 511 aa21.75■■□□□ 1.07
HMGCL-209ENST00000513148 GNAT3A8MTJ3 354 aa21.75■■□□□ 1.07
HMGCL-209ENST00000513148 DEFB132Q7Z7B7 95 aa21.75■■□□□ 1.07
HMGCL-209ENST00000513148 RUNDC1Q96C34 613 aa21.75■■□□□ 1.07
HMGCL-209ENST00000513148 LGR6Q9HBX8 967 aa21.74■■□□□ 1.07
HMGCL-209ENST00000513148 RRP7AQ9Y3A4 280 aaKnown RBP21.73■■□□□ 1.07
HMGCL-209ENST00000513148 CCER2I3L3R5 266 aa21.72■■□□□ 1.07
HMGCL-209ENST00000513148 NFE2L2Q16236 605 aa21.72■■□□□ 1.07
HMGCL-209ENST00000513148 TMOD3Q9NYL9 352 aa21.72■■□□□ 1.07
HMGCL-209ENST00000513148 SENP3-EIF4A1A0A087X0R7 540 aa21.72■■□□□ 1.07
HMGCL-209ENST00000513148 RNMTO43148 476 aaKnown RBP21.72■■□□□ 1.07
HMGCL-209ENST00000513148 BAG6P46379 1132 aa21.72■■□□□ 1.07
HMGCL-209ENST00000513148 NEUROD2Q15784 382 aa21.72■■□□□ 1.07
HMGCL-209ENST00000513148 ADAMTS7Q9UKP4 1686 aa21.72■■□□□ 1.07
HMGCL-209ENST00000513148 EN1Q05925 392 aaPredicted RBP21.71■■□□□ 1.07
HMGCL-209ENST00000513148 CABP4P57796 275 aa21.7■■□□□ 1.06
HMGCL-209ENST00000513148 MCM10Q7L590 875 aa21.7■■□□□ 1.06
HMGCL-209ENST00000513148 PIGBQ92521 554 aa21.7■■□□□ 1.06
HMGCL-209ENST00000513148 RTF1Q92541 710 aaKnown RBP21.7■■□□□ 1.06
HMGCL-209ENST00000513148 ERVV-2B6SEH9 535 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms