RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 COL18A1P39060 1754 aa18.19■□□□□ 0.5
SDHA-215ENST00000512962 KCNV2Q8TDN2 545 aa18.18■□□□□ 0.5
SDHA-215ENST00000512962 ACEP12821 1306 aa18.18■□□□□ 0.5
SDHA-215ENST00000512962 SENP3-EIF4A1A0A087X0R7 540 aa18.16■□□□□ 0.5
SDHA-215ENST00000512962 RGPD5Q99666 1765 aa18.16■□□□□ 0.5
SDHA-215ENST00000512962 CRB1P82279 1406 aa18.15■□□□□ 0.5
SDHA-215ENST00000512962 C19orf67A6NJJ6 358 aa18.14■□□□□ 0.49
SDHA-215ENST00000512962 PLSCR1O15162 318 aa18.14■□□□□ 0.49
SDHA-215ENST00000512962 MS4A3Q96HJ5 214 aa18.13■□□□□ 0.49
SDHA-215ENST00000512962 FHDC1Q9C0D6 1143 aaPredicted RBP18.13■□□□□ 0.49
SDHA-215ENST00000512962 TRPC6Q9Y210 931 aa18.13■□□□□ 0.49
SDHA-215ENST00000512962 THRAP3Q9Y2W1 955 aaKnown RBP18.13■□□□□ 0.49
SDHA-215ENST00000512962 PAPPAQ13219 1627 aa18.12■□□□□ 0.49
SDHA-215ENST00000512962 TMEM106CQ9BVX2 250 aa18.12■□□□□ 0.49
SDHA-215ENST00000512962 CDK19Q9BWU1 502 aa18.12■□□□□ 0.49
SDHA-215ENST00000512962 SLIT3O75094 1523 aa18.12■□□□□ 0.49
SDHA-215ENST00000512962 PIK3C2AO00443 1686 aa18.12■□□□□ 0.49
SDHA-215ENST00000512962 C1QTNF8P60827 252 aa18.11■□□□□ 0.49
SDHA-215ENST00000512962 ABTB2Q8N961 1025 aa18.11■□□□□ 0.49
SDHA-215ENST00000512962 SYT17Q9BSW7 474 aa18.11■□□□□ 0.49
SDHA-215ENST00000512962 GCP02774 474 aa18.1■□□□□ 0.49
SDHA-215ENST00000512962 MARCH10Q8NA82 808 aaPredicted RBP18.1■□□□□ 0.49
SDHA-215ENST00000512962 MS4A4AQ96JQ5 239 aa18.1■□□□□ 0.49
SDHA-215ENST00000512962 PLEKHG3A1L390 1219 aa18.08■□□□□ 0.48
SDHA-215ENST00000512962 DCAF11Q8TEB1 546 aa18.08■□□□□ 0.48
SDHA-215ENST00000512962 NHSQ6T4R5 1651 aa18.07■□□□□ 0.48
SDHA-215ENST00000512962 ZBTB7CA1YPR0 619 aa18.07■□□□□ 0.48
SDHA-215ENST00000512962 SHANK3Q9BYB0 1731 aa18.06■□□□□ 0.48
SDHA-215ENST00000512962 DDB1Q16531 1140 aa18.06■□□□□ 0.48
SDHA-215ENST00000512962 BCL9O00512 1426 aa18.06■□□□□ 0.48
SDHA-215ENST00000512962 PPIP5K1Q6PFW1 1433 aa18.06■□□□□ 0.48
SDHA-215ENST00000512962 GOLGA2Q08379 1002 aa18.05■□□□□ 0.48
SDHA-215ENST00000512962 TXNRD1Q16881 649 aa18.05■□□□□ 0.48
SDHA-215ENST00000512962 IFFO2Q5TF58 517 aa18.05■□□□□ 0.48
SDHA-215ENST00000512962 AXIN2Q9Y2T1 843 aa18.05■□□□□ 0.48
SDHA-215ENST00000512962 AATKQ6ZMQ8 1374 aa18.04■□□□□ 0.48
SDHA-215ENST00000512962 SLC15A2Q16348 729 aa18.04■□□□□ 0.48
SDHA-215ENST00000512962 TUBGCP6Q96RT7 1819 aa18.03■□□□□ 0.48
SDHA-215ENST00000512962 COL24A1Q17RW2 1714 aa18.03■□□□□ 0.48
SDHA-215ENST00000512962 KIAA1210Q9ULL0 1709 aa18.03■□□□□ 0.48
SDHA-215ENST00000512962 QRICH2Q9H0J4 1663 aa18.03■□□□□ 0.48
SDHA-215ENST00000512962 BTAF1O14981 1849 aa18.02■□□□□ 0.48
SDHA-215ENST00000512962 NLRP13Q86W25 1043 aa18.02■□□□□ 0.48
SDHA-215ENST00000512962 USP6P35125 1406 aa18.01■□□□□ 0.47
SDHA-215ENST00000512962 C11orf95C9JLR9 678 aaPredicted RBP18.01■□□□□ 0.47
SDHA-215ENST00000512962 TOM1L2Q6ZVM7 507 aa18.01■□□□□ 0.47
SDHA-215ENST00000512962 MTFR1LQ9H019 292 aa18.01■□□□□ 0.47
SDHA-215ENST00000512962 STK32BQ9NY57 414 aa18.01■□□□□ 0.47
SDHA-215ENST00000512962 CEP350Q5VT06 3117 aa18.01■□□□□ 0.47
SDHA-215ENST00000512962 RAB3GAP2Q9H2M9 1393 aa18.01■□□□□ 0.47
SDHA-215ENST00000512962 TRPM1Q7Z4N2 1603 aa18.01■□□□□ 0.47
SDHA-215ENST00000512962 WDR17Q8IZU2 1322 aa18■□□□□ 0.47
SDHA-215ENST00000512962 CPSF1Q10570 1443 aaKnown RBP18■□□□□ 0.47
SDHA-215ENST00000512962 GOLGB1Q14789 3259 aaKnown RBP18■□□□□ 0.47
SDHA-215ENST00000512962 MAP3K5Q99683 1374 aa17.98■□□□□ 0.47
SDHA-215ENST00000512962 QSER1Q2KHR3 1735 aa17.98■□□□□ 0.47
SDHA-215ENST00000512962 TNS2Q63HR2 1409 aa17.98■□□□□ 0.47
SDHA-215ENST00000512962 MKRN3Q13064 507 aaKnown RBP17.97■□□□□ 0.47
SDHA-215ENST00000512962 ZNF827Q17R98 1081 aa17.97■□□□□ 0.47
SDHA-215ENST00000512962 ARXQ96QS3 562 aa17.97■□□□□ 0.47
SDHA-215ENST00000512962 NFAT5O94916 1531 aa17.97■□□□□ 0.47
SDHA-215ENST00000512962 TIE1P35590 1138 aa17.96■□□□□ 0.47
SDHA-215ENST00000512962 E2F4Q16254 413 aa17.96■□□□□ 0.47
SDHA-215ENST00000512962 ABCC6O95255 1503 aa17.95■□□□□ 0.46
SDHA-215ENST00000512962 NBPF1Q3BBV0 1214 aa17.95■□□□□ 0.46
SDHA-215ENST00000512962 ACSBG1Q96GR2 724 aa17.94■□□□□ 0.46
SDHA-215ENST00000512962 TTLL13PA6NNM8 815 aa17.93■□□□□ 0.46
SDHA-215ENST00000512962 SRPK2P78362 688 aaKnown RBP17.93■□□□□ 0.46
SDHA-215ENST00000512962 ARHGEF1Q92888 912 aaKnown RBP17.93■□□□□ 0.46
SDHA-215ENST00000512962 GIGYF1O75420 1035 aaPredicted RBP17.92■□□□□ 0.46
SDHA-215ENST00000512962 ARHGEF25Q86VW2 580 aa17.92■□□□□ 0.46
SDHA-215ENST00000512962 LRRC4BQ9NT99 713 aa17.92■□□□□ 0.46
SDHA-215ENST00000512962 CABP1Q9NZU7 370 aa17.92■□□□□ 0.46
SDHA-215ENST00000512962 CARD10Q9BWT7 1032 aa17.91■□□□□ 0.46
SDHA-215ENST00000512962 BRD4O60885 1362 aaPredicted RBP17.91■□□□□ 0.46
SDHA-215ENST00000512962 LTN1O94822 1766 aa17.9■□□□□ 0.46
SDHA-215ENST00000512962 NLGN2Q8NFZ4 835 aa17.9■□□□□ 0.46
SDHA-215ENST00000512962 LARP6Q9BRS8 491 aaKnown RBP17.9■□□□□ 0.46
SDHA-215ENST00000512962 PDE4AP27815 886 aa17.89■□□□□ 0.45
SDHA-215ENST00000512962 GPR162Q16538 588 aa17.89■□□□□ 0.45
SDHA-215ENST00000512962 CDCA7Q9BWT1 371 aaPredicted RBP17.89■□□□□ 0.45
SDHA-215ENST00000512962 CRISPLD2Q9H0B8 497 aa17.89■□□□□ 0.45
SDHA-215ENST00000512962 BMP2KQ9NSY1 1161 aaPredicted RBP17.89■□□□□ 0.45
SDHA-215ENST00000512962 MFSD10Q14728 455 aa17.87■□□□□ 0.45
SDHA-215ENST00000512962 CENPJQ9HC77 1338 aaPredicted RBP17.87■□□□□ 0.45
SDHA-215ENST00000512962 MON2Q7Z3U7 1717 aa17.86■□□□□ 0.45
SDHA-215ENST00000512962 EXOC5O00471 708 aa17.86■□□□□ 0.45
SDHA-215ENST00000512962 CSB-PGBD3P0DP91 1061 aa17.86■□□□□ 0.45
SDHA-215ENST00000512962 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.86■□□□□ 0.45
SDHA-215ENST00000512962 PELP1Q8IZL8 1130 aaKnown RBP17.86■□□□□ 0.45
SDHA-215ENST00000512962 STAC3Q96MF2 364 aa17.86■□□□□ 0.45
SDHA-215ENST00000512962 USP54Q70EL1 1684 aa17.86■□□□□ 0.45
SDHA-215ENST00000512962 GALR2O43603 387 aaPredicted RBP17.85■□□□□ 0.45
SDHA-215ENST00000512962 LY75O60449 1722 aa17.85■□□□□ 0.45
SDHA-215ENST00000512962 YBX3P16989 372 aaKnown RBP eCLIP17.85■□□□□ 0.457e-8■□□□□ 8.2
SDHA-215ENST00000512962 PNPLA7Q6ZV29 1317 aa17.85■□□□□ 0.45
SDHA-215ENST00000512962 DOT1LQ8TEK3 1739 aa17.85■□□□□ 0.45
SDHA-215ENST00000512962 KAT6BQ8WYB5 2073 aa17.85■□□□□ 0.45
SDHA-215ENST00000512962 CCDC7Q96M83 1385 aa17.85■□□□□ 0.45
SDHA-215ENST00000512962 TTC21BQ7Z4L5 1316 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms