RNA–Protein interactions for RNA: ENST00000511241.5

LINC01088-207, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 679 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-207ENST00000511241 MRGPRX2Q96LB1 330 aa12.78□□□□□ -0.36
LINC01088-207ENST00000511241 PLPP7Q8NBV4 271 aa12.77□□□□□ -0.37
LINC01088-207ENST00000511241 PBXIP1Q96AQ6 731 aa12.77□□□□□ -0.37
LINC01088-207ENST00000511241 CEP170Q5SW79 1584 aa12.77□□□□□ -0.37
LINC01088-207ENST00000511241 RGS20O76081 388 aa12.76□□□□□ -0.37
LINC01088-207ENST00000511241 RFX1P22670 979 aa12.76□□□□□ -0.37
LINC01088-207ENST00000511241 ARID5BQ14865 1188 aa12.76□□□□□ -0.37
LINC01088-207ENST00000511241 HOMEZQ8IX15 550 aa12.76□□□□□ -0.37
LINC01088-207ENST00000511241 USP17L5A8MUK1 530 aa12.75□□□□□ -0.37
LINC01088-207ENST00000511241 FHAD1B1AJZ9 1412 aa12.75□□□□□ -0.37
LINC01088-207ENST00000511241 NUP160Q12769 1436 aa12.75□□□□□ -0.37
LINC01088-207ENST00000511241 TRIM52Q96A61 297 aa12.75□□□□□ -0.37
LINC01088-207ENST00000511241 ACIN1Q9UKV3 1341 aaKnown RBP12.74□□□□□ -0.37
LINC01088-207ENST00000511241 PKD2L1Q9P0L9 805 aa12.74□□□□□ -0.37
LINC01088-207ENST00000511241 USP17L3A6NCW0 530 aa12.73□□□□□ -0.37
LINC01088-207ENST00000511241 USP17L4A6NCW7 530 aa12.73□□□□□ -0.37
LINC01088-207ENST00000511241 GRM5P41594 1212 aa12.73□□□□□ -0.37
LINC01088-207ENST00000511241 SRPK2P78362 688 aaKnown RBP12.73□□□□□ -0.37
LINC01088-207ENST00000511241 NR5A1Q13285 461 aa12.73□□□□□ -0.37
LINC01088-207ENST00000511241 TRAF7Q6Q0C0 670 aa12.73□□□□□ -0.37
LINC01088-207ENST00000511241 USP17L2Q6R6M4 530 aa12.73□□□□□ -0.37
LINC01088-207ENST00000511241 USP17L1Q7RTZ2 530 aa12.73□□□□□ -0.37
LINC01088-207ENST00000511241 CCDC85AQ96PX6 553 aaPredicted RBP12.73□□□□□ -0.37
LINC01088-207ENST00000511241 DOLKQ9UPQ8 538 aa12.73□□□□□ -0.37
LINC01088-207ENST00000511241 ADH1CP00326 375 aa12.72□□□□□ -0.37
LINC01088-207ENST00000511241 FOXC1Q12948 553 aa12.72□□□□□ -0.37
LINC01088-207ENST00000511241 INTS6LQ5JSJ4 861 aaKnown RBP12.72□□□□□ -0.37
LINC01088-207ENST00000511241 VRTNQ9H8Y1 702 aa12.72□□□□□ -0.37
LINC01088-207ENST00000511241 TLL2Q9Y6L7 1015 aa12.72□□□□□ -0.37
LINC01088-207ENST00000511241 DHX9Q08211 1270 aaKnown RBP12.71□□□□□ -0.37
LINC01088-207ENST00000511241 EML3Q32P44 896 aa12.71□□□□□ -0.37
LINC01088-207ENST00000511241 SNIP1Q8TAD8 396 aaKnown RBP12.71□□□□□ -0.37
LINC01088-207ENST00000511241 ERICH3Q5RHP9 1530 aa12.71□□□□□ -0.38
LINC01088-207ENST00000511241 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.7□□□□□ -0.38
LINC01088-207ENST00000511241 NCOA4Q13772 614 aa12.7□□□□□ -0.38
LINC01088-207ENST00000511241 SIRT1Q96EB6 747 aa12.7□□□□□ -0.38
LINC01088-207ENST00000511241 GDF9O60383 454 aa12.69□□□□□ -0.38
LINC01088-207ENST00000511241 FSHRP23945 695 aa12.69□□□□□ -0.38
LINC01088-207ENST00000511241 TSGA10IPQ3SY00 556 aa12.69□□□□□ -0.38
LINC01088-207ENST00000511241 PCDHB11Q9Y5F2 797 aa12.69□□□□□ -0.38
LINC01088-207ENST00000511241 ATP5J2-PTCD1G3V325 749 aa12.68□□□□□ -0.38
LINC01088-207ENST00000511241 USP4Q13107 963 aa12.68□□□□□ -0.38
LINC01088-207ENST00000511241 KANK4Q5T7N3 995 aaPredicted RBP12.68□□□□□ -0.38
LINC01088-207ENST00000511241 DEPDC4Q8N2C3 294 aa12.68□□□□□ -0.38
LINC01088-207ENST00000511241 ERVH48-1M5A8F1 160 aa12.67□□□□□ -0.38
LINC01088-207ENST00000511241 ALDH1A1P00352 501 aa12.67□□□□□ -0.38
LINC01088-207ENST00000511241 RAB15P59190 212 aa12.67□□□□□ -0.38
LINC01088-207ENST00000511241 PRR20EP86478 221 aa12.67□□□□□ -0.38
LINC01088-207ENST00000511241 PRR20CP86479 221 aa12.67□□□□□ -0.38
LINC01088-207ENST00000511241 PRR20DP86480 221 aa12.67□□□□□ -0.38
LINC01088-207ENST00000511241 PRR20BP86481 221 aa12.67□□□□□ -0.38
LINC01088-207ENST00000511241 PRR20AP86496 221 aa12.67□□□□□ -0.38
LINC01088-207ENST00000511241 MKRN1Q9UHC7 482 aaKnown RBP12.67□□□□□ -0.38
LINC01088-207ENST00000511241 NOD1Q9Y239 953 aa12.67□□□□□ -0.38
LINC01088-207ENST00000511241 TRIM50Q86XT4 487 aa12.66□□□□□ -0.38
LINC01088-207ENST00000511241 CCDC116Q8IYX3 515 aa12.66□□□□□ -0.38
LINC01088-207ENST00000511241 CYP4X1Q8N118 509 aa12.66□□□□□ -0.38
LINC01088-207ENST00000511241 ATG7O95352 703 aa12.65□□□□□ -0.38
LINC01088-207ENST00000511241 OXLD1Q5BKU9 147 aa12.65□□□□□ -0.38
LINC01088-207ENST00000511241 WASF2Q9Y6W5 498 aa12.65□□□□□ -0.38
LINC01088-207ENST00000511241 IGF1RP08069 1367 aa12.65□□□□□ -0.38
LINC01088-207ENST00000511241 SHROOM2Q13796 1616 aa12.65□□□□□ -0.38
LINC01088-207ENST00000511241 PRG4Q92954 1404 aaPredicted RBP12.64□□□□□ -0.39
LINC01088-207ENST00000511241 TTC24A2A3L6 582 aaPredicted RBP12.64□□□□□ -0.39
LINC01088-207ENST00000511241 CDCA7Q9BWT1 371 aaPredicted RBP12.64□□□□□ -0.39
LINC01088-207ENST00000511241 MYCP01106 439 aaPredicted RBP12.63□□□□□ -0.39
LINC01088-207ENST00000511241 ATP1A2P50993 1020 aa12.63□□□□□ -0.39
LINC01088-207ENST00000511241 TOR4AQ9NXH8 423 aa12.63□□□□□ -0.39
LINC01088-207ENST00000511241 EMILIN1Q9Y6C2 1016 aa12.63□□□□□ -0.39
LINC01088-207ENST00000511241 FAM196BA6NMK8 535 aa12.62□□□□□ -0.39
LINC01088-207ENST00000511241 PDE4CQ08493 712 aa12.62□□□□□ -0.39
LINC01088-207ENST00000511241 CDCA8Q53HL2 280 aa12.62□□□□□ -0.39
LINC01088-207ENST00000511241 PPP1R26Q5T8A7 1209 aaPredicted RBP12.62□□□□□ -0.39
LINC01088-207ENST00000511241 ESF1Q9H501 851 aaKnown RBP12.62□□□□□ -0.39
LINC01088-207ENST00000511241 PGPEP1Q9NXJ5 209 aa12.62□□□□□ -0.39
LINC01088-207ENST00000511241 TNFRSF10AO00220 468 aa12.61□□□□□ -0.39
LINC01088-207ENST00000511241 ERVK-9P63128 1117 aa12.61□□□□□ -0.39
LINC01088-207ENST00000511241 NNTQ13423 1086 aa12.61□□□□□ -0.39
LINC01088-207ENST00000511241 ELOAQ14241 798 aaKnown RBP12.61□□□□□ -0.39
LINC01088-207ENST00000511241 CC2D2BQ6DHV5 1058 aa12.61□□□□□ -0.39
LINC01088-207ENST00000511241 LARP1Q6PKG0 1096 aaKnown RBP12.61□□□□□ -0.39
LINC01088-207ENST00000511241 TRIM67Q6ZTA4 783 aa12.61□□□□□ -0.39
LINC01088-207ENST00000511241 NR3C2P08235 984 aa12.6□□□□□ -0.39
LINC01088-207ENST00000511241 RASA1P20936 1047 aa12.6□□□□□ -0.39
LINC01088-207ENST00000511241 MYT1Q01538 1121 aa12.6□□□□□ -0.39
LINC01088-207ENST00000511241 RUSC2Q8N2Y8 1516 aa12.6□□□□□ -0.39
LINC01088-207ENST00000511241 KIF27Q86VH2 1401 aa12.6□□□□□ -0.39
LINC01088-207ENST00000511241 TMPRSS4Q9NRS4 437 aa12.59□□□□□ -0.39
LINC01088-207ENST00000511241 CSB-PGBD3P0DP91 1061 aa12.58□□□□□ -0.4
LINC01088-207ENST00000511241 GTF2IP78347 998 aa12.58□□□□□ -0.4
LINC01088-207ENST00000511241 LARGE2Q8N3Y3 721 aa12.58□□□□□ -0.4
LINC01088-207ENST00000511241 OGFOD1Q8N543 542 aa12.58□□□□□ -0.4
LINC01088-207ENST00000511241 DNAAF2Q9NVR5 837 aaKnown RBP12.58□□□□□ -0.4
LINC01088-207ENST00000511241 J3QL48 77 aa12.57□□□□□ -0.4
LINC01088-207ENST00000511241 PTK7Q13308 1070 aa12.57□□□□□ -0.4
LINC01088-207ENST00000511241 ZNF784Q8NCA9 323 aaPredicted RBP12.57□□□□□ -0.4
LINC01088-207ENST00000511241 USP17L15C9J2P7 530 aa12.56□□□□□ -0.4
LINC01088-207ENST00000511241 USP17L10C9JJH3 530 aa12.56□□□□□ -0.4
LINC01088-207ENST00000511241 USP17L13C9JLJ4 530 aa12.56□□□□□ -0.4
LINC01088-207ENST00000511241 USP17L12C9JPN9 530 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms