RNA–Protein interactions for RNA: ENST00000508006.1

SNCB-204, Transcript of synuclein beta, humanhuman

TSL 2

Gene SNCB, Length 969 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-204ENST00000508006 HOXC9P31274 260 aa30.25■■■□□ 2.43
SNCB-204ENST00000508006 TXNRD1Q16881 649 aa30.25■■■□□ 2.43
SNCB-204ENST00000508006 FAM208AQ9UK61 1670 aaKnown RBP30.25■■■□□ 2.43
SNCB-204ENST00000508006 BCL9O00512 1426 aa30.24■■■□□ 2.43
SNCB-204ENST00000508006 PDGFDQ9GZP0 370 aaPredicted RBP30.23■■■□□ 2.43
SNCB-204ENST00000508006 EMILIN1Q9Y6C2 1016 aa30.23■■■□□ 2.43
SNCB-204ENST00000508006 ATF5Q9Y2D1 282 aaPredicted RBP30.22■■■□□ 2.43
SNCB-204ENST00000508006 INSRP06213 1382 aa30.22■■■□□ 2.43
SNCB-204ENST00000508006 CNGB1Q14028 1251 aaPredicted RBP30.2■■■□□ 2.43
SNCB-204ENST00000508006 NLRP2Q9NX02 1062 aa30.2■■■□□ 2.43
SNCB-204ENST00000508006 SLC15A2Q16348 729 aa30.19■■■□□ 2.42
SNCB-204ENST00000508006 ERBB3P21860 1342 aa30.18■■■□□ 2.42
SNCB-204ENST00000508006 PPM1GO15355 546 aaPredicted RBP30.17■■■□□ 2.42
SNCB-204ENST00000508006 ACSBG1Q96GR2 724 aa30.17■■■□□ 2.42
SNCB-204ENST00000508006 CASZ1Q86V15 1759 aa30.16■■■□□ 2.42
SNCB-204ENST00000508006 PPP2R1AP30153 589 aa30.16■■■□□ 2.42
SNCB-204ENST00000508006 MTHFSP49914 203 aa30.16■■■□□ 2.42
SNCB-204ENST00000508006 PRKRIP1Q9H875 184 aaPredicted RBP30.16■■■□□ 2.42
SNCB-204ENST00000508006 HSP90AB2PQ58FF8 381 aa30.14■■■□□ 2.42
SNCB-204ENST00000508006 ANKRD24Q8TF21 1146 aa30.14■■■□□ 2.42
SNCB-204ENST00000508006 KAT6BQ8WYB5 2073 aa30.14■■■□□ 2.42
SNCB-204ENST00000508006 IL2RBP14784 551 aa30.13■■■□□ 2.41
SNCB-204ENST00000508006 TNS2Q63HR2 1409 aa30.13■■■□□ 2.41
SNCB-204ENST00000508006 PTGER2P43116 358 aa30.12■■■□□ 2.41
SNCB-204ENST00000508006 MYBBP1AQ9BQG0 1328 aaKnown RBP30.11■■■□□ 2.41
SNCB-204ENST00000508006 ANP32CO43423 234 aa30.1■■■□□ 2.41
SNCB-204ENST00000508006 MTFR1LQ9H019 292 aa30.1■■■□□ 2.41
SNCB-204ENST00000508006 CFAP53Q96M91 514 aa30.08■■■□□ 2.41
SNCB-204ENST00000508006 SYT17Q9BSW7 474 aa30.07■■■□□ 2.4
SNCB-204ENST00000508006 FHDC1Q9C0D6 1143 aaPredicted RBP30.07■■■□□ 2.4
SNCB-204ENST00000508006 RGPD2P0DJD1 1756 aa30.07■■■□□ 2.4
SNCB-204ENST00000508006 LTV1Q96GA3 475 aaPredicted RBP30.05■■■□□ 2.4
SNCB-204ENST00000508006 EIF4A2Q14240 407 aaKnown RBP30.04■■■□□ 2.4
SNCB-204ENST00000508006 COL3A1P02461 1466 aaPredicted RBP30.04■■■□□ 2.4
SNCB-204ENST00000508006 NHSQ6T4R5 1651 aa30.03■■■□□ 2.4
SNCB-204ENST00000508006 DIAPH1O60610 1272 aaKnown RBP30.01■■■□□ 2.39
SNCB-204ENST00000508006 NCAPD2Q15021 1401 aa30.01■■■□□ 2.39
SNCB-204ENST00000508006 DDX54Q8TDD1 881 aaKnown RBP30■■■□□ 2.39
SNCB-204ENST00000508006 ARXQ96QS3 562 aa30■■■□□ 2.39
SNCB-204ENST00000508006 IL13P35225 146 aa29.99■■■□□ 2.39
SNCB-204ENST00000508006 NBPF6Q5VWK0 638 aa29.98■■■□□ 2.39
SNCB-204ENST00000508006 NBPF4Q96M43 638 aa29.98■■■□□ 2.39
SNCB-204ENST00000508006 IGSF1Q8N6C5 1336 aa29.96■■■□□ 2.39
SNCB-204ENST00000508006 DIEXFQ68CQ4 756 aaKnown RBP29.96■■■□□ 2.39
SNCB-204ENST00000508006 EYA1Q99502 592 aa29.96■■■□□ 2.39
SNCB-204ENST00000508006 SGIP1Q9BQI5 828 aa29.96■■■□□ 2.39
SNCB-204ENST00000508006 BTAF1O14981 1849 aa29.96■■■□□ 2.39
SNCB-204ENST00000508006 NUDCQ9Y266 331 aa29.95■■■□□ 2.39
SNCB-204ENST00000508006 PLEKHG2Q9H7P9 1386 aa29.94■■■□□ 2.38
SNCB-204ENST00000508006 SYTL4Q96C24 671 aaPredicted RBP29.94■■■□□ 2.38
SNCB-204ENST00000508006 LRRC4BQ9NT99 713 aa29.94■■■□□ 2.38
SNCB-204ENST00000508006 ZNF827Q17R98 1081 aa29.93■■■□□ 2.38
SNCB-204ENST00000508006 ZNF784Q8NCA9 323 aaPredicted RBP29.93■■■□□ 2.38
SNCB-204ENST00000508006 SLC27A3Q5K4L6 730 aa29.91■■■□□ 2.38
SNCB-204ENST00000508006 KLHL34Q8N239 644 aa29.9■■■□□ 2.38
SNCB-204ENST00000508006 KDRP35968 1356 aa29.9■■■□□ 2.38
SNCB-204ENST00000508006 SLC16A10Q8TF71 515 aa29.89■■■□□ 2.38
SNCB-204ENST00000508006 POLD1P28340 1107 aa29.88■■■□□ 2.37
SNCB-204ENST00000508006 GPR162Q16538 588 aa29.88■■■□□ 2.37
SNCB-204ENST00000508006 UTRNP46939 3433 aa29.87■■■□□ 2.37
SNCB-204ENST00000508006 RAPGEF4Q8WZA2 1011 aa29.87■■■□□ 2.37
SNCB-204ENST00000508006 TFCP2L1Q9NZI6 479 aa29.87■■■□□ 2.37
SNCB-204ENST00000508006 PAPPAQ13219 1627 aa29.86■■■□□ 2.37
SNCB-204ENST00000508006 PRIM1P49642 420 aaKnown RBP29.86■■■□□ 2.37
SNCB-204ENST00000508006 AKT1S1Q96B36 256 aa29.86■■■□□ 2.37
SNCB-204ENST00000508006 CHD4Q14839 1912 aa29.86■■■□□ 2.37
SNCB-204ENST00000508006 USHBP1Q8N6Y0 703 aa29.85■■■□□ 2.37
SNCB-204ENST00000508006 U2SURPO15042 1029 aaKnown RBP29.84■■■□□ 2.37
SNCB-204ENST00000508006 TATP17735 454 aaPredicted RBP29.83■■■□□ 2.37
SNCB-204ENST00000508006 SULT6B1Q6IMI4 303 aa29.83■■■□□ 2.37
SNCB-204ENST00000508006 ZCRB1Q8TBF4 217 aaKnown RBP29.83■■■□□ 2.37
SNCB-204ENST00000508006 PKD1L3Q7Z443 1732 aa29.82■■■□□ 2.36
SNCB-204ENST00000508006 MEGF6O75095 1541 aa29.82■■■□□ 2.36
SNCB-204ENST00000508006 MAP3K5Q99683 1374 aa29.82■■■□□ 2.36
SNCB-204ENST00000508006 KCNQ4P56696 695 aa29.82■■■□□ 2.36
SNCB-204ENST00000508006 PELP1Q8IZL8 1130 aaKnown RBP29.81■■■□□ 2.36
SNCB-204ENST00000508006 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.8■■■□□ 2.36
SNCB-204ENST00000508006 PNPLA7Q6ZV29 1317 aa29.79■■■□□ 2.36
SNCB-204ENST00000508006 FCHSD2O94868 740 aa29.78■■■□□ 2.36
SNCB-204ENST00000508006 U2AF1L5P0DN76 240 aaPredicted RBP29.78■■■□□ 2.36
SNCB-204ENST00000508006 U2AF1Q01081 240 aaKnown RBP eCLIP29.78■■■□□ 2.36
SNCB-204ENST00000508006 SHANK3Q9BYB0 1731 aa29.77■■■□□ 2.36
SNCB-204ENST00000508006 MSH5O43196 834 aa29.77■■■□□ 2.36
SNCB-204ENST00000508006 AEBP1Q8IUX7 1158 aa29.77■■■□□ 2.36
SNCB-204ENST00000508006 PNNQ9H307 717 aaKnown RBP29.77■■■□□ 2.36
SNCB-204ENST00000508006 CCNL1Q9UK58 526 aaPredicted RBP29.76■■■□□ 2.35
SNCB-204ENST00000508006 HMOX1P09601 288 aa29.75■■■□□ 2.35
SNCB-204ENST00000508006 CCER2I3L3R5 266 aa29.74■■■□□ 2.35
SNCB-204ENST00000508006 WDR43Q15061 677 aaKnown RBP eCLIP29.74■■■□□ 2.35
SNCB-204ENST00000508006 AMOTQ4VCS5 1084 aa29.74■■■□□ 2.35
SNCB-204ENST00000508006 MRS2Q9HD23 443 aa29.74■■■□□ 2.35
SNCB-204ENST00000508006 SPG7Q9UQ90 795 aa29.74■■■□□ 2.35
SNCB-204ENST00000508006 RSPH6AQ9H0K4 717 aa29.73■■■□□ 2.35
SNCB-204ENST00000508006 QSER1Q2KHR3 1735 aa29.73■■■□□ 2.35
SNCB-204ENST00000508006 DOT1LQ8TEK3 1739 aa29.71■■■□□ 2.35
SNCB-204ENST00000508006 PLEKHO1Q53GL0 409 aaPredicted RBP29.71■■■□□ 2.35
SNCB-204ENST00000508006 PCDH11XQ9BZA7 1347 aa29.71■■■□□ 2.35
SNCB-204ENST00000508006 PCDH11YQ9BZA8 1340 aa29.71■■■□□ 2.35
SNCB-204ENST00000508006 SENP3-EIF4A1A0A087X0R7 540 aa29.7■■■□□ 2.35
SNCB-204ENST00000508006 CCDC184Q52MB2 194 aa29.7■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms