RNA–Protein interactions for RNA: ENST00000507316.1

TUSC3-205, Transcript of tumor suppressor candidate 3, human

TSL 3

Gene TUSC3, Length 573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUSC3-205	ENST00000507316	YBX3	P16989	372 aa	Known RBP eCLIP	7.2	□□□□□ -1.26
TUSC3-205	ENST00000507316	KCNH2	Q12809	1159 aa		7.2	□□□□□ -1.26
TUSC3-205	ENST00000507316	TAF7L	Q5H9L4	462 aa		7.2	□□□□□ -1.26
TUSC3-205	ENST00000507316	DESI1	Q6ICB0	168 aa		7.2	□□□□□ -1.26
TUSC3-205	ENST00000507316	RSPH6A	Q9H0K4	717 aa		7.2	□□□□□ -1.26
TUSC3-205	ENST00000507316	MBIP	Q9NS73	344 aa		7.2	□□□□□ -1.26
TUSC3-205	ENST00000507316	EVA1B	Q9NVM1	165 aa		7.2	□□□□□ -1.26
TUSC3-205	ENST00000507316	POLR3E	Q9NVU0	708 aa		7.2	□□□□□ -1.26
TUSC3-205	ENST00000507316	LIMD1	Q9UGP4	676 aa		7.2	□□□□□ -1.26
TUSC3-205	ENST00000507316	CLK2	P49760	499 aa	Known RBP	7.19	□□□□□ -1.26
TUSC3-205	ENST00000507316	PDE4C	Q08493	712 aa		7.19	□□□□□ -1.26
TUSC3-205	ENST00000507316	PRPF38B	Q5VTL8	546 aa	Known RBP	7.19	□□□□□ -1.26
TUSC3-205	ENST00000507316	ACD	Q96AP0	544 aa		7.19	□□□□□ -1.26
TUSC3-205	ENST00000507316	CD163	Q86VB7	1156 aa		7.18	□□□□□ -1.26
TUSC3-205	ENST00000507316	MKL2	Q9ULH7	1088 aa		7.18	□□□□□ -1.26
TUSC3-205	ENST00000507316	LAMC2	Q13753	1193 aa		7.17	□□□□□ -1.26
TUSC3-205	ENST00000507316	GRIN2C	Q14957	1233 aa		7.17	□□□□□ -1.26
TUSC3-205	ENST00000507316	QPCT	Q16769	361 aa		7.17	□□□□□ -1.26
TUSC3-205	ENST00000507316	LYPD8	Q6UX82	237 aa		7.17	□□□□□ -1.26
TUSC3-205	ENST00000507316	HELB	Q8NG08	1087 aa	Predicted RBP	7.17	□□□□□ -1.26
TUSC3-205	ENST00000507316	GPBP1L1	Q9HC44	474 aa	Predicted RBP	7.17	□□□□□ -1.26
TUSC3-205	ENST00000507316	GRM5	P41594	1212 aa		7.16	□□□□□ -1.26
TUSC3-205	ENST00000507316	AGER	Q15109	404 aa		7.16	□□□□□ -1.26
TUSC3-205	ENST00000507316	DIEXF	Q68CQ4	756 aa	Known RBP	7.16	□□□□□ -1.26
TUSC3-205	ENST00000507316	KDM4C	Q9H3R0	1056 aa		7.16	□□□□□ -1.26
TUSC3-205	ENST00000507316	MAP10	Q9P2G4	905 aa		7.16	□□□□□ -1.26
TUSC3-205	ENST00000507316	CDK11A	Q9UQ88	783 aa	Predicted RBP	7.15	□□□□□ -1.26
TUSC3-205	ENST00000507316	PER1	O15534	1290 aa	Predicted RBP	7.14	□□□□□ -1.27
TUSC3-205	ENST00000507316	CHRNA4	P43681	627 aa		7.14	□□□□□ -1.27
TUSC3-205	ENST00000507316	BRPF1	P55201	1214 aa	Predicted RBP	7.14	□□□□□ -1.27
TUSC3-205	ENST00000507316	MYO15B	Q96JP2	1530 aa		7.14	□□□□□ -1.27
TUSC3-205	ENST00000507316	FANCI	Q9NVI1	1328 aa		7.13	□□□□□ -1.27
TUSC3-205	ENST00000507316	SENP3-EIF4A1	A0A087X0R7	540 aa		7.13	□□□□□ -1.27
TUSC3-205	ENST00000507316	LILRB3	O75022	631 aa		7.13	□□□□□ -1.27
TUSC3-205	ENST00000507316	TUSC1	Q2TAM9	212 aa		7.13	□□□□□ -1.27
TUSC3-205	ENST00000507316	RTL5	Q5HYW3	569 aa	Predicted RBP	7.13	□□□□□ -1.27
TUSC3-205	ENST00000507316	DDRGK1	Q96HY6	314 aa		7.13	□□□□□ -1.27
TUSC3-205	ENST00000507316	LRRC4B	Q9NT99	713 aa		7.13	□□□□□ -1.27
TUSC3-205	ENST00000507316	CUEDC1	Q9NWM3	386 aa	Predicted RBP	7.13	□□□□□ -1.27
TUSC3-205	ENST00000507316	SPINT1	O43278	529 aa		7.12	□□□□□ -1.27
TUSC3-205	ENST00000507316	FGD1	P98174	961 aa		7.12	□□□□□ -1.27
TUSC3-205	ENST00000507316	SUV39H2	Q9H5I1	410 aa		7.12	□□□□□ -1.27
TUSC3-205	ENST00000507316	GPR25	O00155	361 aa		7.11	□□□□□ -1.27
TUSC3-205	ENST00000507316	OIP5	O43482	229 aa		7.11	□□□□□ -1.27
TUSC3-205	ENST00000507316	F12	P00748	615 aa	Predicted RBP	7.11	□□□□□ -1.27
TUSC3-205	ENST00000507316	FZD5	Q13467	585 aa		7.11	□□□□□ -1.27
TUSC3-205	ENST00000507316	FAM117A	Q9C073	453 aa		7.11	□□□□□ -1.27
TUSC3-205	ENST00000507316	TXK	P42681	527 aa		7.1	□□□□□ -1.27
TUSC3-205	ENST00000507316	SKIV2L	Q15477	1246 aa	Known RBP	7.1	□□□□□ -1.27
TUSC3-205	ENST00000507316	ARMC2	Q8NEN0	867 aa		7.1	□□□□□ -1.27
TUSC3-205	ENST00000507316	FOXJ1	Q92949	421 aa		7.1	□□□□□ -1.27
TUSC3-205	ENST00000507316	RRAGC	Q9HB90	399 aa		7.1	□□□□□ -1.27
TUSC3-205	ENST00000507316	DEK	P35659	375 aa	Known RBP	7.08	□□□□□ -1.28
TUSC3-205	ENST00000507316	CTSO	P43234	321 aa	Predicted RBP	7.08	□□□□□ -1.28
TUSC3-205	ENST00000507316	CTDSPL2	Q05D32	466 aa		7.08	□□□□□ -1.28
TUSC3-205	ENST00000507316	NEUROD2	Q15784	382 aa		7.08	□□□□□ -1.28
TUSC3-205	ENST00000507316	SH3D19	Q5HYK7	790 aa		7.08	□□□□□ -1.28
TUSC3-205	ENST00000507316	NBPF14	Q5TI25	921 aa		7.08	□□□□□ -1.28
TUSC3-205	ENST00000507316	BPHL	Q86WA6	291 aa	Predicted RBP	7.08	□□□□□ -1.28
TUSC3-205	ENST00000507316	PROCA1	Q8NCQ7	364 aa	Predicted RBP	7.08	□□□□□ -1.28
TUSC3-205	ENST00000507316	NISCH	Q9Y2I1	1504 aa		7.07	□□□□□ -1.28
TUSC3-205	ENST00000507316	MAGEB6P1	A0A0J9YX57	407 aa		7.07	□□□□□ -1.28
TUSC3-205	ENST00000507316	BRD2	P25440	801 aa	Known RBP	7.07	□□□□□ -1.28
TUSC3-205	ENST00000507316	RSPO4	Q2I0M5	234 aa	Predicted RBP	7.07	□□□□□ -1.28
TUSC3-205	ENST00000507316	KRTAP4-11	Q9BYQ6	195 aa		7.07	□□□□□ -1.28
TUSC3-205	ENST00000507316	AP1G2	O75843	785 aa		7.06	□□□□□ -1.28
TUSC3-205	ENST00000507316	CBLB	Q13191	982 aa		7.06	□□□□□ -1.28
TUSC3-205	ENST00000507316	MCTP1	Q6DN14	999 aa		7.06	□□□□□ -1.28
TUSC3-205	ENST00000507316	C14orf37	Q86TY3	774 aa		7.06	□□□□□ -1.28
TUSC3-205	ENST00000507316	CARD14	Q9BXL6	1004 aa		7.06	□□□□□ -1.28
TUSC3-205	ENST00000507316	EMILIN1	Q9Y6C2	1016 aa		7.06	□□□□□ -1.28
TUSC3-205	ENST00000507316	SHISA8	B8ZZ34	492 aa		7.05	□□□□□ -1.28
TUSC3-205	ENST00000507316	PAX4	O43316	350 aa		7.05	□□□□□ -1.28
TUSC3-205	ENST00000507316	FOXR1	Q6PIV2	292 aa		7.05	□□□□□ -1.28
TUSC3-205	ENST00000507316	SUPT16H	Q9Y5B9	1047 aa	Known RBP	7.05	□□□□□ -1.28
TUSC3-205	ENST00000507316	GATA4	P43694	442 aa		7.04	□□□□□ -1.28
TUSC3-205	ENST00000507316	LRRN4	Q8WUT4	740 aa		7.04	□□□□□ -1.28
TUSC3-205	ENST00000507316	ZNF837	Q96EG3	531 aa	Predicted RBP	7.04	□□□□□ -1.28
TUSC3-205	ENST00000507316	FSHR	P23945	695 aa		7.03	□□□□□ -1.28
TUSC3-205	ENST00000507316	C4orf48	Q5BLP8	95 aa		7.03	□□□□□ -1.28
TUSC3-205	ENST00000507316	NPM2	Q86SE8	214 aa	Known RBP	7.03	□□□□□ -1.28
TUSC3-205	ENST00000507316	IL27	Q8NEV9	243 aa		7.03	□□□□□ -1.28
TUSC3-205	ENST00000507316	KRTAP4-5	Q9BYR2	181 aa		7.03	□□□□□ -1.28
TUSC3-205	ENST00000507316	NR6A1	Q15406	480 aa		7.02	□□□□□ -1.29
TUSC3-205	ENST00000507316	NKAPL	Q5M9Q1	402 aa		7.02	□□□□□ -1.29
TUSC3-205	ENST00000507316	LINC00114	Q6XXX2	140 aa		7.02	□□□□□ -1.29
TUSC3-205	ENST00000507316	VASH1	Q7L8A9	365 aa	Predicted RBP	7.02	□□□□□ -1.29
TUSC3-205	ENST00000507316	PCMTD1	Q96MG8	357 aa	Predicted RBP	7.02	□□□□□ -1.29
TUSC3-205	ENST00000507316	INSM2	Q96T92	566 aa	Predicted RBP	7.02	□□□□□ -1.29
TUSC3-205	ENST00000507316	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	7.02	□□□□□ -1.29
TUSC3-205	ENST00000507316	HYAL3	O43820	417 aa	Predicted RBP	7.01	□□□□□ -1.29
TUSC3-205	ENST00000507316	AAMP	Q13685	434 aa		7.01	□□□□□ -1.29
TUSC3-205	ENST00000507316	LRP8	Q14114	963 aa		7.01	□□□□□ -1.29
TUSC3-205	ENST00000507316		Q6ZVU0	165 aa		7.01	□□□□□ -1.29
TUSC3-205	ENST00000507316	RNF217	Q8TC41	542 aa		7.01	□□□□□ -1.29
TUSC3-205	ENST00000507316	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	7.01	□□□□□ -1.29
TUSC3-205	ENST00000507316	ARHGAP9	Q9BRR9	750 aa		7.01	□□□□□ -1.29
TUSC3-205	ENST00000507316	POLM	Q9NP87	494 aa	Predicted RBP	7.01	□□□□□ -1.29
TUSC3-205	ENST00000507316	HMGB1	P09429	215 aa	Known RBP	7	□□□□□ -1.29
TUSC3-205	ENST00000507316	MX2	P20592	715 aa		7	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms