RNA–Protein interactions for RNA: ENST00000507316.1

TUSC3-205, Transcript of tumor suppressor candidate 3, humanhuman

TSL 3

Gene TUSC3, Length 573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-205ENST00000507316 AEBP2Q6ZN18 517 aaPredicted RBP24.84■■□□□ 1.57
TUSC3-205ENST00000507316 CHIC1Q5VXU3 224 aa23.16■■□□□ 1.3
TUSC3-205ENST00000507316 SENP3Q9H4L4 574 aaPredicted RBP21.34■■□□□ 1.01
TUSC3-205ENST00000507316 PHF23Q9BUL5 403 aaPredicted RBP20.94■□□□□ 0.94
TUSC3-205ENST00000507316 POTEDQ86YR6 584 aa20.76■□□□□ 0.91
TUSC3-205ENST00000507316 FOXD1Q16676 465 aa20.07■□□□□ 0.8
TUSC3-205ENST00000507316 MSH5O43196 834 aa19.19■□□□□ 0.66
TUSC3-205ENST00000507316 PIAS4Q8N2W9 510 aaPredicted RBP18.48■□□□□ 0.55
TUSC3-205ENST00000507316 PPP6R1Q9UPN7 881 aa17.89■□□□□ 0.45
TUSC3-205ENST00000507316 ADRA2BP18089 450 aa17.78■□□□□ 0.44
TUSC3-205ENST00000507316 PLPPR3Q6T4P5 718 aa17.4■□□□□ 0.38
TUSC3-205ENST00000507316 CACNB1Q02641 598 aaPredicted RBP17.24■□□□□ 0.35
TUSC3-205ENST00000507316 DMRT2Q9Y5R5 561 aa16.73■□□□□ 0.27
TUSC3-205ENST00000507316 MAPK8IP2Q13387 824 aaPredicted RBP16.7■□□□□ 0.26
TUSC3-205ENST00000507316 RNF39Q9H2S5 420 aa16.27■□□□□ 0.2
TUSC3-205ENST00000507316 DCAF8L1A6NGE4 600 aa16.22■□□□□ 0.19
TUSC3-205ENST00000507316 SCAF1Q9H7N4 1312 aaKnown RBP16.21■□□□□ 0.19
TUSC3-205ENST00000507316 POTEHQ6S545 545 aa16.03■□□□□ 0.16
TUSC3-205ENST00000507316 C1QBPQ07021 282 aaKnown RBP15.96■□□□□ 0.15
TUSC3-205ENST00000507316 HOXD11P31277 338 aaPredicted RBP15.65■□□□□ 0.1
TUSC3-205ENST00000507316 DNAJC5BQ9UF47 199 aa15.28■□□□□ 0.04
TUSC3-205ENST00000507316 RNF216Q9NWF9 866 aaPredicted RBP15.23■□□□□ 0.03
TUSC3-205ENST00000507316 PPP4R3CPQ6ZMV5 832 aa15.12■□□□□ 0.01
TUSC3-205ENST00000507316 CNKSR2Q8WXI2 1034 aa15.08■□□□□ 0
TUSC3-205ENST00000507316 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.98□□□□□ -0.01
TUSC3-205ENST00000507316 DSG3P32926 999 aa14.87□□□□□ -0.03
TUSC3-205ENST00000507316 CAPN15O75808 1086 aa14.72□□□□□ -0.05
TUSC3-205ENST00000507316 SPINK5Q9NQ38 1064 aaPredicted RBP14.68□□□□□ -0.06
TUSC3-205ENST00000507316 U3KPZ7 1027 aaPredicted RBP14.51□□□□□ -0.09
TUSC3-205ENST00000507316 SP7Q8TDD2 431 aaPredicted RBP14.47□□□□□ -0.09
TUSC3-205ENST00000507316 CHRDL2Q6WN34 429 aa14.36□□□□□ -0.11
TUSC3-205ENST00000507316 ABCB7O75027 752 aa14.29□□□□□ -0.12
TUSC3-205ENST00000507316 TRHP20396 242 aaPredicted RBP14.22□□□□□ -0.13
TUSC3-205ENST00000507316 RBM42Q9BTD8 480 aaKnown RBP14.19□□□□□ -0.14
TUSC3-205ENST00000507316 NCBP3Q53F19 620 aaKnown RBP14.16□□□□□ -0.14
TUSC3-205ENST00000507316 ZNF219Q9P2Y4 722 aaPredicted RBP14.07□□□□□ -0.16
TUSC3-205ENST00000507316 NPM3O75607 178 aaKnown RBP13.98□□□□□ -0.17
TUSC3-205ENST00000507316 APLP2Q06481 763 aa13.94□□□□□ -0.18
TUSC3-205ENST00000507316 HAX1O00165 279 aa13.9□□□□□ -0.18
TUSC3-205ENST00000507316 PIP4P2Q8N4L2 257 aa13.78□□□□□ -0.2
TUSC3-205ENST00000507316 PLSCR2Q9NRY7 297 aa13.77□□□□□ -0.21
TUSC3-205ENST00000507316 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.65□□□□□ -0.22
TUSC3-205ENST00000507316 SLC4A2P04920 1241 aa13.65□□□□□ -0.22
TUSC3-205ENST00000507316 HNRNPUL2Q1KMD3 747 aaKnown RBP13.65□□□□□ -0.22
TUSC3-205ENST00000507316 EVX2Q03828 476 aa13.63□□□□□ -0.23
TUSC3-205ENST00000507316 AKT1S1Q96B36 256 aa13.62□□□□□ -0.23
TUSC3-205ENST00000507316 LHX8Q68G74 356 aa13.59□□□□□ -0.23
TUSC3-205ENST00000507316 POLA2Q14181 598 aa13.55□□□□□ -0.24
TUSC3-205ENST00000507316 SAMD1Q6SPF0 538 aaPredicted RBP13.52□□□□□ -0.25
TUSC3-205ENST00000507316 REM2Q8IYK8 340 aaPredicted RBP13.52□□□□□ -0.25
TUSC3-205ENST00000507316 FXR2P51116 673 aaKnown RBP eCLIP13.49□□□□□ -0.25
TUSC3-205ENST00000507316 PITPNM1O00562 1244 aa13.39□□□□□ -0.27
TUSC3-205ENST00000507316 GABBR2O75899 941 aa13.24□□□□□ -0.29
TUSC3-205ENST00000507316 OSCARQ8IYS5 282 aa13.15□□□□□ -0.3
TUSC3-205ENST00000507316 C19orf67A6NJJ6 358 aa13.1□□□□□ -0.31
TUSC3-205ENST00000507316 ZBTB12Q9Y330 459 aaPredicted RBP13.09□□□□□ -0.31
TUSC3-205ENST00000507316 PRKAR2AP13861 404 aaKnown RBP13.06□□□□□ -0.32
TUSC3-205ENST00000507316 POTEIP0CG38 1075 aa12.94□□□□□ -0.34
TUSC3-205ENST00000507316 MYCNP04198 464 aaPredicted RBP12.93□□□□□ -0.34
TUSC3-205ENST00000507316 POTEMA6NI47 508 aa12.86□□□□□ -0.35
TUSC3-205ENST00000507316 CLEC11AQ9Y240 323 aa12.82□□□□□ -0.36
TUSC3-205ENST00000507316 ATF5Q9Y2D1 282 aaPredicted RBP12.79□□□□□ -0.36
TUSC3-205ENST00000507316 POTEGQ6S5H5 508 aa12.78□□□□□ -0.36
TUSC3-205ENST00000507316 CHADLQ6NUI6 762 aa12.7□□□□□ -0.38
TUSC3-205ENST00000507316 SPDYE1Q8NFV5 336 aaPredicted RBP12.7□□□□□ -0.38
TUSC3-205ENST00000507316 KCNA4P22459 653 aa12.69□□□□□ -0.38
TUSC3-205ENST00000507316 OTUD5Q96G74 571 aa12.68□□□□□ -0.38
TUSC3-205ENST00000507316 DCBLD2Q96PD2 775 aa12.65□□□□□ -0.38
TUSC3-205ENST00000507316 PCDH10Q9P2E7 1040 aa12.65□□□□□ -0.38
TUSC3-205ENST00000507316 SPDYE2BA6NHP3 402 aa12.62□□□□□ -0.39
TUSC3-205ENST00000507316 SPDYE6P0CI01 402 aa12.62□□□□□ -0.39
TUSC3-205ENST00000507316 SPDYE2Q495Y8 402 aa12.62□□□□□ -0.39
TUSC3-205ENST00000507316 CD44P16070 742 aaKnown RBP12.57□□□□□ -0.4
TUSC3-205ENST00000507316 CLCN6P51797 869 aa12.54□□□□□ -0.4
TUSC3-205ENST00000507316 POTEB2H3BUK9 544 aa12.51□□□□□ -0.41
TUSC3-205ENST00000507316 PRR29P0C7W0 189 aa12.41□□□□□ -0.42
TUSC3-205ENST00000507316 ZNF692Q9BU19 519 aaPredicted RBP12.34□□□□□ -0.43
TUSC3-205ENST00000507316 FBLN2P98095 1184 aa12.33□□□□□ -0.44
TUSC3-205ENST00000507316 FARP1Q9Y4F1 1045 aaPredicted RBP12.33□□□□□ -0.44
TUSC3-205ENST00000507316 SSUH2Q9Y2M2 353 aa12.31□□□□□ -0.44
TUSC3-205ENST00000507316 ZNF579Q8NAF0 562 aaKnown RBP12.27□□□□□ -0.45
TUSC3-205ENST00000507316 GALR2O43603 387 aaPredicted RBP12.26□□□□□ -0.45
TUSC3-205ENST00000507316 LCE2DQ5TA82 110 aaPredicted RBP12.26□□□□□ -0.45
TUSC3-205ENST00000507316 FAM163AQ96GL9 167 aaPredicted RBP12.25□□□□□ -0.45
TUSC3-205ENST00000507316 ZRANB1Q9UGI0 708 aa12.23□□□□□ -0.45
TUSC3-205ENST00000507316 FOXD4L1Q9NU39 408 aa12.18□□□□□ -0.46
TUSC3-205ENST00000507316 PELP1Q8IZL8 1130 aaKnown RBP12.14□□□□□ -0.47
TUSC3-205ENST00000507316 POTEJP0CG39 1038 aa12.12□□□□□ -0.47
TUSC3-205ENST00000507316 PABPN1Q86U42 306 aaKnown RBP eCLIP12.11□□□□□ -0.47
TUSC3-205ENST00000507316 MKRN4PQ13434 485 aaPredicted RBP12.1□□□□□ -0.47
TUSC3-205ENST00000507316 CDAN1Q8IWY9 1227 aa12.08□□□□□ -0.48
TUSC3-205ENST00000507316 MAMSTRQ6ZN01 415 aa12.07□□□□□ -0.48
TUSC3-205ENST00000507316 METRNQ9UJH8 293 aa12.03□□□□□ -0.48
TUSC3-205ENST00000507316 PHF12Q96QT6 1004 aa11.95□□□□□ -0.5
TUSC3-205ENST00000507316 SCUBE2Q9NQ36 999 aa11.95□□□□□ -0.5
TUSC3-205ENST00000507316 C7P10643 843 aa11.94□□□□□ -0.5
TUSC3-205ENST00000507316 SLC39A7Q92504 469 aa11.94□□□□□ -0.5
TUSC3-205ENST00000507316 MMRN1Q13201 1228 aa11.89□□□□□ -0.51
TUSC3-205ENST00000507316 SLC4A1APQ9BWU0 796 aaKnown RBP11.89□□□□□ -0.51
TUSC3-205ENST00000507316 ASTLQ6HA08 431 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms