RNA–Protein interactions for RNA: ENST00000506578.5

LEMD2-206, Transcript of LEM domain containing 2, humanhuman

TSL 5

Gene LEMD2, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-206ENST00000506578 DDX54Q8TDD1 881 aaKnown RBP23.25■■□□□ 1.31
LEMD2-206ENST00000506578 PRKRIP1Q9H875 184 aaPredicted RBP23.25■■□□□ 1.31
LEMD2-206ENST00000506578 MEGF6O75095 1541 aa23.25■■□□□ 1.31
LEMD2-206ENST00000506578 MYBBP1AQ9BQG0 1328 aaKnown RBP23.25■■□□□ 1.31
LEMD2-206ENST00000506578 TNS2Q63HR2 1409 aa23.24■■□□□ 1.31
LEMD2-206ENST00000506578 ZCRB1Q8TBF4 217 aaKnown RBP23.24■■□□□ 1.31
LEMD2-206ENST00000506578 NUDCQ9Y266 331 aa23.24■■□□□ 1.31
LEMD2-206ENST00000506578 ANP32CO43423 234 aa23.22■■□□□ 1.31
LEMD2-206ENST00000506578 HMOX1P09601 288 aa23.22■■□□□ 1.31
LEMD2-206ENST00000506578 FAM196AQ6ZSG2 479 aa23.22■■□□□ 1.31
LEMD2-206ENST00000506578 AEBP1Q8IUX7 1158 aa23.22■■□□□ 1.31
LEMD2-206ENST00000506578 MARCH10Q8NA82 808 aaPredicted RBP23.22■■□□□ 1.31
LEMD2-206ENST00000506578 OVOS2A0A0G2JMS6 1433 aa23.22■■□□□ 1.31
LEMD2-206ENST00000506578 COL3A1P02461 1466 aaPredicted RBP23.21■■□□□ 1.31
LEMD2-206ENST00000506578 KAT6BQ8WYB5 2073 aa23.2■■□□□ 1.3
LEMD2-206ENST00000506578 NCAPD2Q15021 1401 aa23.2■■□□□ 1.3
LEMD2-206ENST00000506578 UPF1Q92900 1129 aaKnown RBP eCLIP23.19■■□□□ 1.38e-12■■■■■ 61.1
LEMD2-206ENST00000506578 SPG7Q9UQ90 795 aa23.19■■□□□ 1.3
LEMD2-206ENST00000506578 U2AF1L5P0DN76 240 aaPredicted RBP23.18■■□□□ 1.3
LEMD2-206ENST00000506578 U2AF1Q01081 240 aaKnown RBP eCLIP23.18■■□□□ 1.3
LEMD2-206ENST00000506578 SF3B2Q13435 895 aaKnown RBP23.18■■□□□ 1.3
LEMD2-206ENST00000506578 RGPD1P0DJD0 1748 aa23.17■■□□□ 1.3
LEMD2-206ENST00000506578 CCER2I3L3R5 266 aa23.17■■□□□ 1.3
LEMD2-206ENST00000506578 PCDH11XQ9BZA7 1347 aa23.16■■□□□ 1.3
LEMD2-206ENST00000506578 PCDH11YQ9BZA8 1340 aa23.16■■□□□ 1.3
LEMD2-206ENST00000506578 TRIM37O94972 964 aa23.16■■□□□ 1.3
LEMD2-206ENST00000506578 PLEKHO1Q53GL0 409 aaPredicted RBP23.15■■□□□ 1.3
LEMD2-206ENST00000506578 KDRP35968 1356 aa23.14■■□□□ 1.29
LEMD2-206ENST00000506578 ACSBG1Q96GR2 724 aa23.13■■□□□ 1.29
LEMD2-206ENST00000506578 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.13■■□□□ 1.291e-6■□□□□ 9.6
LEMD2-206ENST00000506578 AMOTQ4VCS5 1084 aa23.12■■□□□ 1.29
LEMD2-206ENST00000506578 CCDC125Q86Z20 511 aa23.12■■□□□ 1.29
LEMD2-206ENST00000506578 BCL11AQ9H165 835 aa23.12■■□□□ 1.29
LEMD2-206ENST00000506578 NEFLP07196 543 aa23.11■■□□□ 1.29
LEMD2-206ENST00000506578 SHANK3Q9BYB0 1731 aa23.11■■□□□ 1.29
LEMD2-206ENST00000506578 CYP27B1O15528 508 aa23.1■■□□□ 1.29
LEMD2-206ENST00000506578 ZNF530Q6P9A1 599 aaPredicted RBP23.1■■□□□ 1.29
LEMD2-206ENST00000506578 SYTL4Q96C24 671 aaPredicted RBP23.1■■□□□ 1.29
LEMD2-206ENST00000506578 PKD1L3Q7Z443 1732 aa23.1■■□□□ 1.29
LEMD2-206ENST00000506578 IFNL2Q8IZJ0 200 aa23.09■■□□□ 1.29
LEMD2-206ENST00000506578 PRKAR2BP31323 418 aa23.09■■□□□ 1.29
LEMD2-206ENST00000506578 C1orf141Q5JVX7 400 aa23.09■■□□□ 1.29
LEMD2-206ENST00000506578 WDR43Q15061 677 aaKnown RBP eCLIP23.08■■□□□ 1.29
LEMD2-206ENST00000506578 APBA3O96018 575 aa23.07■■□□□ 1.28
LEMD2-206ENST00000506578 PLEKHG2Q9H7P9 1386 aa23.07■■□□□ 1.28
LEMD2-206ENST00000506578 NEFMP07197 916 aa23.06■■□□□ 1.28
LEMD2-206ENST00000506578 PHKG2P15735 406 aa23.06■■□□□ 1.28
LEMD2-206ENST00000506578 SBF2Q86WG5 1849 aa23.06■■□□□ 1.28
LEMD2-206ENST00000506578 KCNQ2O43526 872 aa23.06■■□□□ 1.28
LEMD2-206ENST00000506578 FCHSD2O94868 740 aa23.06■■□□□ 1.28
LEMD2-206ENST00000506578 BCL11BQ9C0K0 894 aaPredicted RBP23.06■■□□□ 1.28
LEMD2-206ENST00000506578 RSPH6AQ9H0K4 717 aa23.06■■□□□ 1.28
LEMD2-206ENST00000506578 BCL9O00512 1426 aa23.05■■□□□ 1.28
LEMD2-206ENST00000506578 BAG6P46379 1132 aa23.05■■□□□ 1.28
LEMD2-206ENST00000506578 PRIM1P49642 420 aaKnown RBP23.04■■□□□ 1.28
LEMD2-206ENST00000506578 PTF1AQ7RTS3 328 aa23.04■■□□□ 1.28
LEMD2-206ENST00000506578 DEFB132Q7Z7B7 95 aa23.04■■□□□ 1.28
LEMD2-206ENST00000506578 HSP90AB1P08238 724 aaKnown RBP23.03■■□□□ 1.28
LEMD2-206ENST00000506578 MTHFSDQ2M296 383 aaKnown RBP23.03■■□□□ 1.28
LEMD2-206ENST00000506578 DOT1LQ8TEK3 1739 aa23.02■■□□□ 1.28
LEMD2-206ENST00000506578 PNNQ9H307 717 aaKnown RBP23.02■■□□□ 1.28
LEMD2-206ENST00000506578 EN1Q05925 392 aaPredicted RBP23.01■■□□□ 1.27
LEMD2-206ENST00000506578 PHACTR3Q96KR7 559 aa23.01■■□□□ 1.27
LEMD2-206ENST00000506578 MRS2Q9HD23 443 aa23.01■■□□□ 1.27
LEMD2-206ENST00000506578 TNS1Q9HBL0 1735 aaKnown RBP23.01■■□□□ 1.27
LEMD2-206ENST00000506578 FKBP8Q14318 412 aa23■■□□□ 1.27
LEMD2-206ENST00000506578 MPRIPQ6WCQ1 1025 aa23■■□□□ 1.27
LEMD2-206ENST00000506578 GAS2L2Q8NHY3 880 aa23■■□□□ 1.27
LEMD2-206ENST00000506578 MAPK8IP3Q9UPT6 1336 aa23■■□□□ 1.27
LEMD2-206ENST00000506578 NHSQ6T4R5 1651 aa23■■□□□ 1.27
LEMD2-206ENST00000506578 NKX1-1Q15270 411 aaPredicted RBP23■■□□□ 1.27
LEMD2-206ENST00000506578 AKAP4Q5JQC9 854 aa23■■□□□ 1.27
LEMD2-206ENST00000506578 CCDC184Q52MB2 194 aa22.99■■□□□ 1.27
LEMD2-206ENST00000506578 DCAF5Q96JK2 942 aa22.99■■□□□ 1.27
LEMD2-206ENST00000506578 RBM19Q9Y4C8 960 aaKnown RBP22.97■■□□□ 1.27
LEMD2-206ENST00000506578 TMOD3Q9NYL9 352 aa22.97■■□□□ 1.27
LEMD2-206ENST00000506578 ERICH6BQ5W0A0 696 aa22.96■■□□□ 1.27
LEMD2-206ENST00000506578 ADAMTS8Q9UP79 889 aa22.96■■□□□ 1.27
LEMD2-206ENST00000506578 EZH2Q15910 746 aaKnown RBP22.95■■□□□ 1.26
LEMD2-206ENST00000506578 CCDC146Q8IYE0 955 aa22.95■■□□□ 1.26
LEMD2-206ENST00000506578 BTAF1O14981 1849 aa22.95■■□□□ 1.26
LEMD2-206ENST00000506578 GNAT3A8MTJ3 354 aa22.94■■□□□ 1.26
LEMD2-206ENST00000506578 CABP4P57796 275 aa22.94■■□□□ 1.26
LEMD2-206ENST00000506578 FANCIQ9NVI1 1328 aa22.94■■□□□ 1.26
LEMD2-206ENST00000506578 TOGARAM1Q9Y4F4 1720 aa22.94■■□□□ 1.26
LEMD2-206ENST00000506578 MAP3K5Q99683 1374 aa22.93■■□□□ 1.26
LEMD2-206ENST00000506578 RTF1Q92541 710 aaKnown RBP22.93■■□□□ 1.26
LEMD2-206ENST00000506578 PLEKHF1Q96S99 279 aa22.93■■□□□ 1.26
LEMD2-206ENST00000506578 KDM6AO15550 1401 aaPredicted RBP22.92■■□□□ 1.26
LEMD2-206ENST00000506578 ITGB4P16144 1822 aa22.92■■□□□ 1.26
LEMD2-206ENST00000506578 ERVV-2B6SEH9 535 aa22.92■■□□□ 1.26
LEMD2-206ENST00000506578 PIGBQ92521 554 aa22.92■■□□□ 1.26
LEMD2-206ENST00000506578 PLSCR1O15162 318 aa22.91■■□□□ 1.26
LEMD2-206ENST00000506578 CAMKK2Q96RR4 588 aa22.91■■□□□ 1.26
LEMD2-206ENST00000506578 LGR6Q9HBX8 967 aa22.91■■□□□ 1.26
LEMD2-206ENST00000506578 RNMTO43148 476 aaKnown RBP22.9■■□□□ 1.26
LEMD2-206ENST00000506578 NFATC2IPQ8NCF5 419 aa22.89■■□□□ 1.25
LEMD2-206ENST00000506578 RUNDC1Q96C34 613 aa22.89■■□□□ 1.25
LEMD2-206ENST00000506578 NFE2L2Q16236 605 aa22.88■■□□□ 1.25
LEMD2-206ENST00000506578 SCN11AQ9UI33 1791 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms