RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 FBLN1P23142 703 aa9.92□□□□□ -0.82
GYPB-206ENST00000506516 BARGINQ6ZT62 677 aa9.92□□□□□ -0.82
GYPB-206ENST00000506516 PLCH1Q4KWH8 1693 aa9.92□□□□□ -0.82
GYPB-206ENST00000506516 NFAT5O94916 1531 aa9.92□□□□□ -0.82
GYPB-206ENST00000506516 COL5A2P05997 1499 aaPredicted RBP9.91□□□□□ -0.82
GYPB-206ENST00000506516 RGS12O14924 1447 aa9.91□□□□□ -0.82
GYPB-206ENST00000506516 MAP3K19Q56UN5 1328 aa9.91□□□□□ -0.82
GYPB-206ENST00000506516 HOXC9P31274 260 aa9.91□□□□□ -0.82
GYPB-206ENST00000506516 RRS1Q15050 365 aaKnown RBP9.91□□□□□ -0.82
GYPB-206ENST00000506516 KRT27Q7Z3Y8 459 aa9.91□□□□□ -0.82
GYPB-206ENST00000506516 MORC1Q86VD1 984 aa9.91□□□□□ -0.82
GYPB-206ENST00000506516 HS6ST3Q8IZP7 471 aa9.91□□□□□ -0.82
GYPB-206ENST00000506516 ANKRD24Q8TF21 1146 aa9.91□□□□□ -0.82
GYPB-206ENST00000506516 CARD10Q9BWT7 1032 aa9.91□□□□□ -0.82
GYPB-206ENST00000506516 CRB1P82279 1406 aa9.9□□□□□ -0.82
GYPB-206ENST00000506516 NSD2O96028 1365 aa9.9□□□□□ -0.82
GYPB-206ENST00000506516 MYOM1P52179 1685 aa9.9□□□□□ -0.82
GYPB-206ENST00000506516 PPM1GO15355 546 aaPredicted RBP9.9□□□□□ -0.82
GYPB-206ENST00000506516 PER1O15534 1290 aaPredicted RBP9.9□□□□□ -0.82
GYPB-206ENST00000506516 TNNT2P45379 298 aaPredicted RBP9.9□□□□□ -0.82
GYPB-206ENST00000506516 PDE3BQ13370 1112 aa9.9□□□□□ -0.82
GYPB-206ENST00000506516 LTV1Q96GA3 475 aaPredicted RBP9.9□□□□□ -0.82
GYPB-206ENST00000506516 CDCA7Q9BWT1 371 aaPredicted RBP9.9□□□□□ -0.82
GYPB-206ENST00000506516 NLRP2Q9NX02 1062 aa9.9□□□□□ -0.82
GYPB-206ENST00000506516 BLMP54132 1417 aaPredicted RBP9.9□□□□□ -0.83
GYPB-206ENST00000506516 USP54Q70EL1 1684 aa9.9□□□□□ -0.83
GYPB-206ENST00000506516 GLI3P10071 1580 aa9.89□□□□□ -0.83
GYPB-206ENST00000506516 ERBB3P21860 1342 aa9.89□□□□□ -0.83
GYPB-206ENST00000506516 NRAPQ86VF7 1730 aa9.89□□□□□ -0.83
GYPB-206ENST00000506516 LMO7Q8WWI1 1683 aa9.89□□□□□ -0.83
GYPB-206ENST00000506516 KIF24Q5T7B8 1368 aa9.88□□□□□ -0.83
GYPB-206ENST00000506516 ABCC6O95255 1503 aa9.88□□□□□ -0.83
GYPB-206ENST00000506516 CCDC125Q86Z20 511 aa9.88□□□□□ -0.83
GYPB-206ENST00000506516 UPF1Q92900 1129 aaKnown RBP eCLIP9.88□□□□□ -0.83
GYPB-206ENST00000506516 RTL1A6NKG5 1358 aa9.88□□□□□ -0.83
GYPB-206ENST00000506516 FLT4P35916 1363 aa9.88□□□□□ -0.83
GYPB-206ENST00000506516 EXOC5O00471 708 aa9.87□□□□□ -0.83
GYPB-206ENST00000506516 DDB1Q16531 1140 aa9.87□□□□□ -0.83
GYPB-206ENST00000506516 HSP90AB2PQ58FF8 381 aa9.87□□□□□ -0.83
GYPB-206ENST00000506516 CC2D1BQ5T0F9 858 aaKnown RBP9.87□□□□□ -0.83
GYPB-206ENST00000506516 PAXIP1Q6ZW49 1069 aaPredicted RBP9.87□□□□□ -0.83
GYPB-206ENST00000506516 POLKQ9UBT6 870 aa9.87□□□□□ -0.83
GYPB-206ENST00000506516 EMILIN1Q9Y6C2 1016 aa9.87□□□□□ -0.83
GYPB-206ENST00000506516 COL18A1P39060 1754 aa9.86□□□□□ -0.83
GYPB-206ENST00000506516 SMG6Q86US8 1419 aaKnown RBP9.86□□□□□ -0.83
GYPB-206ENST00000506516 INSRP06213 1382 aa9.86□□□□□ -0.83
GYPB-206ENST00000506516 KIF20BQ96Q89 1820 aa9.85□□□□□ -0.83
GYPB-206ENST00000506516 STK25O00506 426 aa9.85□□□□□ -0.83
GYPB-206ENST00000506516 IL2RBP14784 551 aa9.85□□□□□ -0.83
GYPB-206ENST00000506516 SF3B2Q13435 895 aaKnown RBP9.85□□□□□ -0.83
GYPB-206ENST00000506516 CNGB1Q14028 1251 aaPredicted RBP9.85□□□□□ -0.83
GYPB-206ENST00000506516 FAM196AQ6ZSG2 479 aa9.85□□□□□ -0.83
GYPB-206ENST00000506516 CFAP44Q96MT7 982 aa9.85□□□□□ -0.83
GYPB-206ENST00000506516 NBPF6Q5VWK0 638 aa9.84□□□□□ -0.83
GYPB-206ENST00000506516 ZNF467Q7Z7K2 595 aaPredicted RBP9.84□□□□□ -0.83
GYPB-206ENST00000506516 NBPF4Q96M43 638 aa9.84□□□□□ -0.83
GYPB-206ENST00000506516 NPC1L1Q9UHC9 1359 aa9.84□□□□□ -0.83
GYPB-206ENST00000506516 LTN1O94822 1766 aa9.83□□□□□ -0.84
GYPB-206ENST00000506516 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.83□□□□□ -0.84
GYPB-206ENST00000506516 FAM182BQ5T319 152 aa9.83□□□□□ -0.84
GYPB-206ENST00000506516 SPRYD3Q8NCJ5 442 aa9.83□□□□□ -0.84
GYPB-206ENST00000506516 RAPGEF4Q8WZA2 1011 aa9.83□□□□□ -0.84
GYPB-206ENST00000506516 ZFP91Q96JP5 570 aaPredicted RBP9.83□□□□□ -0.84
GYPB-206ENST00000506516 SGIP1Q9BQI5 828 aa9.83□□□□□ -0.84
GYPB-206ENST00000506516 MTHFSP49914 203 aa9.82□□□□□ -0.84
GYPB-206ENST00000506516 DDX10Q13206 875 aaKnown RBP9.82□□□□□ -0.84
GYPB-206ENST00000506516 TATP17735 454 aaPredicted RBP9.81□□□□□ -0.84
GYPB-206ENST00000506516 EIF4A2Q14240 407 aaKnown RBP9.81□□□□□ -0.84
GYPB-206ENST00000506516 RGPD5Q99666 1765 aa9.8□□□□□ -0.84
GYPB-206ENST00000506516 THSD7AQ9UPZ6 1657 aa9.8□□□□□ -0.84
GYPB-206ENST00000506516 USHBP1Q8N6Y0 703 aa9.8□□□□□ -0.84
GYPB-206ENST00000506516 MARCH10Q8NA82 808 aaPredicted RBP9.8□□□□□ -0.84
GYPB-206ENST00000506516 ZCRB1Q8TBF4 217 aaKnown RBP9.8□□□□□ -0.84
GYPB-206ENST00000506516 PHF12Q96QT6 1004 aa9.8□□□□□ -0.84
GYPB-206ENST00000506516 EYA1Q99502 592 aa9.8□□□□□ -0.84
GYPB-206ENST00000506516 BCL11BQ9C0K0 894 aaPredicted RBP9.8□□□□□ -0.84
GYPB-206ENST00000506516 TRIM37O94972 964 aa9.79□□□□□ -0.84
GYPB-206ENST00000506516 BAG6P46379 1132 aa9.79□□□□□ -0.84
GYPB-206ENST00000506516 DDX54Q8TDD1 881 aaKnown RBP9.79□□□□□ -0.84
GYPB-206ENST00000506516 CFAP53Q96M91 514 aa9.79□□□□□ -0.84
GYPB-206ENST00000506516 STK24Q9Y6E0 443 aa9.79□□□□□ -0.84
GYPB-206ENST00000506516 DISP2A7MBM2 1401 aa9.79□□□□□ -0.84
GYPB-206ENST00000506516 ANKRD26Q9UPS8 1709 aa9.79□□□□□ -0.84
GYPB-206ENST00000506516 ZNF316A6NFI3 1004 aaPredicted RBP9.78□□□□□ -0.84
GYPB-206ENST00000506516 DIAPH1O60610 1272 aaKnown RBP9.78□□□□□ -0.84
GYPB-206ENST00000506516 PCDHB8Q9UN66 801 aa9.78□□□□□ -0.84
GYPB-206ENST00000506516 SPG7Q9UQ90 795 aa9.78□□□□□ -0.84
GYPB-206ENST00000506516 PCDHB13Q9Y5F0 798 aa9.78□□□□□ -0.84
GYPB-206ENST00000506516 OVOS2A0A0G2JMS6 1433 aa9.78□□□□□ -0.84
GYPB-206ENST00000506516 EP400Q96L91 3159 aa9.77□□□□□ -0.84
GYPB-206ENST00000506516 PEAK1Q9H792 1746 aa9.77□□□□□ -0.85
GYPB-206ENST00000506516 APBA3O96018 575 aa9.77□□□□□ -0.85
GYPB-206ENST00000506516 IL13P35225 146 aa9.77□□□□□ -0.85
GYPB-206ENST00000506516 PDAP1Q13442 181 aaKnown RBP9.77□□□□□ -0.85
GYPB-206ENST00000506516 MAP2P11137 1827 aaKnown RBP9.77□□□□□ -0.85
GYPB-206ENST00000506516 BRWD3Q6RI45 1802 aa9.77□□□□□ -0.85
GYPB-206ENST00000506516 FAM208AQ9UK61 1670 aaKnown RBP9.77□□□□□ -0.85
GYPB-206ENST00000506516 PARP4Q9UKK3 1724 aaKnown RBP9.76□□□□□ -0.85
GYPB-206ENST00000506516 TNS2Q63HR2 1409 aa9.76□□□□□ -0.85
GYPB-206ENST00000506516 GALR2O43603 387 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms