RNA–Protein interactions for RNA: ENST00000505149.1

LINC01088-202, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 624 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-202ENST00000505149 C6orf118Q5T5N4 469 aa7.68□□□□□ -1.18
LINC01088-202ENST00000505149 MYCP01106 439 aaPredicted RBP7.67□□□□□ -1.18
LINC01088-202ENST00000505149 GPC1P35052 558 aa7.67□□□□□ -1.18
LINC01088-202ENST00000505149 TSGA10IPQ3SY00 556 aa7.67□□□□□ -1.18
LINC01088-202ENST00000505149 NPAS3Q8IXF0 933 aa7.67□□□□□ -1.18
LINC01088-202ENST00000505149 PLPP7Q8NBV4 271 aa7.67□□□□□ -1.18
LINC01088-202ENST00000505149 AGBL1Q96MI9 1066 aa7.67□□□□□ -1.18
LINC01088-202ENST00000505149 CDCA7Q9BWT1 371 aaPredicted RBP7.67□□□□□ -1.18
LINC01088-202ENST00000505149 TTLL8A6PVC2 850 aa7.66□□□□□ -1.18
LINC01088-202ENST00000505149 GNRH1P01148 92 aa7.66□□□□□ -1.18
LINC01088-202ENST00000505149 RELBQ01201 579 aa7.66□□□□□ -1.18
LINC01088-202ENST00000505149 HDGFL1Q5TGJ6 251 aa7.66□□□□□ -1.18
LINC01088-202ENST00000505149 RNF144AP50876 292 aaPredicted RBP7.65□□□□□ -1.18
LINC01088-202ENST00000505149 CLN3Q13286 438 aa7.65□□□□□ -1.18
LINC01088-202ENST00000505149 PLEKHM2Q8IWE5 1019 aa7.65□□□□□ -1.18
LINC01088-202ENST00000505149 DNMT3LQ9UJW3 386 aa7.65□□□□□ -1.18
LINC01088-202ENST00000505149 PIK3CDO00329 1044 aa7.64□□□□□ -1.19
LINC01088-202ENST00000505149 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.64□□□□□ -1.19
LINC01088-202ENST00000505149 GLMNQ92990 594 aa7.64□□□□□ -1.19
LINC01088-202ENST00000505149 UCN2Q96RP3 112 aa7.64□□□□□ -1.19
LINC01088-202ENST00000505149 INSM2Q96T92 566 aaPredicted RBP7.64□□□□□ -1.19
LINC01088-202ENST00000505149 ESF1Q9H501 851 aaKnown RBP7.64□□□□□ -1.19
LINC01088-202ENST00000505149 A0A1W2PRU2 124 aa7.63□□□□□ -1.19
LINC01088-202ENST00000505149 WASLO00401 505 aaPredicted RBP7.63□□□□□ -1.19
LINC01088-202ENST00000505149 MAN1A2O60476 641 aa7.63□□□□□ -1.19
LINC01088-202ENST00000505149 CTSOP43234 321 aaPredicted RBP7.63□□□□□ -1.19
LINC01088-202ENST00000505149 FOXD4L5Q5VV16 416 aaPredicted RBP7.63□□□□□ -1.19
LINC01088-202ENST00000505149 RNF217Q8TC41 542 aa7.63□□□□□ -1.19
LINC01088-202ENST00000505149 ZMYND15Q9H091 742 aa7.63□□□□□ -1.19
LINC01088-202ENST00000505149 ZNF395Q9H8N7 513 aaPredicted RBP7.63□□□□□ -1.19
LINC01088-202ENST00000505149 HRH3Q9Y5N1 445 aa7.63□□□□□ -1.19
LINC01088-202ENST00000505149 ATP9BO43861 1147 aa7.62□□□□□ -1.19
LINC01088-202ENST00000505149 SKIP12755 728 aa7.62□□□□□ -1.19
LINC01088-202ENST00000505149 NXF1Q9UBU9 619 aaKnown RBP7.62□□□□□ -1.19
LINC01088-202ENST00000505149 USP17L5A8MUK1 530 aa7.61□□□□□ -1.19
LINC01088-202ENST00000505149 EML3Q32P44 896 aa7.61□□□□□ -1.19
LINC01088-202ENST00000505149 OXLD1Q5BKU9 147 aa7.61□□□□□ -1.19
LINC01088-202ENST00000505149 LCE2AQ5TA79 106 aaPredicted RBP7.61□□□□□ -1.19
LINC01088-202ENST00000505149 XAGE2Q96GT9 111 aa7.61□□□□□ -1.19
LINC01088-202ENST00000505149 ESYT1Q9BSJ8 1104 aa7.61□□□□□ -1.19
LINC01088-202ENST00000505149 TERTO14746 1132 aaKnown RBP7.6□□□□□ -1.19
LINC01088-202ENST00000505149 NFX1Q12986 1120 aaKnown RBP7.6□□□□□ -1.19
LINC01088-202ENST00000505149 ESCO1Q5FWF5 840 aa7.6□□□□□ -1.19
LINC01088-202ENST00000505149 GRIP2Q9C0E4 1043 aa7.6□□□□□ -1.19
LINC01088-202ENST00000505149 POLMQ9NP87 494 aaPredicted RBP7.6□□□□□ -1.19
LINC01088-202ENST00000505149 IL2RAP01589 272 aa7.59□□□□□ -1.19
LINC01088-202ENST00000505149 NCOA4Q13772 614 aa7.59□□□□□ -1.19
LINC01088-202ENST00000505149 WDR44Q5JSH3 913 aa7.59□□□□□ -1.19
LINC01088-202ENST00000505149 TREML4Q6UXN2 200 aa7.59□□□□□ -1.19
LINC01088-202ENST00000505149 TBC1D9Q6ZT07 1266 aa7.59□□□□□ -1.19
LINC01088-202ENST00000505149 CALR3Q96L12 384 aaKnown RBP7.59□□□□□ -1.19
LINC01088-202ENST00000505149 ARHGEF10LQ9HCE6 1279 aa7.59□□□□□ -1.19
LINC01088-202ENST00000505149 NOD1Q9Y239 953 aa7.59□□□□□ -1.19
LINC01088-202ENST00000505149 PCDHGA11Q9Y5H2 935 aa7.59□□□□□ -1.19
LINC01088-202ENST00000505149 USP17L3A6NCW0 530 aa7.58□□□□□ -1.2
LINC01088-202ENST00000505149 USP17L4A6NCW7 530 aa7.58□□□□□ -1.2
LINC01088-202ENST00000505149 SOBPA7XYQ1 873 aa7.58□□□□□ -1.2
LINC01088-202ENST00000505149 SPATA31C2B4DYI2 1134 aa7.58□□□□□ -1.2
LINC01088-202ENST00000505149 H3BM21 787 aa7.58□□□□□ -1.2
LINC01088-202ENST00000505149 SCNN1DP51172 638 aa7.58□□□□□ -1.2
LINC01088-202ENST00000505149 USP17L2Q6R6M4 530 aa7.58□□□□□ -1.2
LINC01088-202ENST00000505149 USP17L1Q7RTZ2 530 aa7.58□□□□□ -1.2
LINC01088-202ENST00000505149 LYSMD3Q7Z3D4 306 aa7.58□□□□□ -1.2
LINC01088-202ENST00000505149 CNKSR1Q969H4 720 aa7.58□□□□□ -1.2
LINC01088-202ENST00000505149 NLRP3Q96P20 1036 aa7.58□□□□□ -1.2
LINC01088-202ENST00000505149 SLC35F4A4IF30 521 aa7.57□□□□□ -1.2
LINC01088-202ENST00000505149 MEN1O00255 615 aa7.57□□□□□ -1.2
LINC01088-202ENST00000505149 VSIG8P0DPA2 414 aa7.57□□□□□ -1.2
LINC01088-202ENST00000505149 PTSQ03393 145 aa7.57□□□□□ -1.2
LINC01088-202ENST00000505149 TRIM50Q86XT4 487 aa7.57□□□□□ -1.2
LINC01088-202ENST00000505149 PPP1R12CQ9BZL4 782 aa7.57□□□□□ -1.2
LINC01088-202ENST00000505149 FHDC1Q9C0D6 1143 aaPredicted RBP7.57□□□□□ -1.2
LINC01088-202ENST00000505149 ETNK1Q9HBU6 452 aa7.57□□□□□ -1.2
LINC01088-202ENST00000505149 MAFBQ9Y5Q3 323 aaPredicted RBP7.57□□□□□ -1.2
LINC01088-202ENST00000505149 INHAP05111 366 aa7.56□□□□□ -1.2
LINC01088-202ENST00000505149 SLC4A9Q96Q91 983 aa7.56□□□□□ -1.2
LINC01088-202ENST00000505149 SENP3-EIF4A1A0A087X0R7 540 aa7.55□□□□□ -1.2
LINC01088-202ENST00000505149 PALM3A6NDB9 673 aaPredicted RBP7.55□□□□□ -1.2
LINC01088-202ENST00000505149 FIGNL2A6NMB9 653 aa7.55□□□□□ -1.2
LINC01088-202ENST00000505149 PPFIA3O75145 1194 aa7.55□□□□□ -1.2
LINC01088-202ENST00000505149 WFS1O76024 890 aa7.55□□□□□ -1.2
LINC01088-202ENST00000505149 GTF2IP78347 998 aa7.55□□□□□ -1.2
LINC01088-202ENST00000505149 CENPCQ03188 943 aa7.55□□□□□ -1.2
LINC01088-202ENST00000505149 ERICH6Q7L0X2 663 aa7.55□□□□□ -1.2
LINC01088-202ENST00000505149 SLC16A10Q8TF71 515 aa7.55□□□□□ -1.2
LINC01088-202ENST00000505149 RAB6BQ9NRW1 208 aa7.55□□□□□ -1.2
LINC01088-202ENST00000505149 TFIP11Q9UBB9 837 aaKnown RBP7.55□□□□□ -1.2
LINC01088-202ENST00000505149 TMEM229AB2RXF0 380 aa7.54□□□□□ -1.2
LINC01088-202ENST00000505149 ATP1A2P50993 1020 aa7.54□□□□□ -1.2
LINC01088-202ENST00000505149 GDF10P55107 478 aa7.54□□□□□ -1.2
LINC01088-202ENST00000505149 MTFR1Q15390 333 aa7.54□□□□□ -1.2
LINC01088-202ENST00000505149 NANOS1Q8WY41 292 aaKnown RBP7.54□□□□□ -1.2
LINC01088-202ENST00000505149 ZNF777Q9ULD5 760 aaPredicted RBP7.54□□□□□ -1.2
LINC01088-202ENST00000505149 SLC27A3Q5K4L6 730 aa7.53□□□□□ -1.2
LINC01088-202ENST00000505149 PPARGC1BQ86YN6 1023 aaKnown RBP7.53□□□□□ -1.2
LINC01088-202ENST00000505149 DEPDC4Q8N2C3 294 aa7.53□□□□□ -1.2
LINC01088-202ENST00000505149 LARGE2Q8N3Y3 721 aa7.53□□□□□ -1.2
LINC01088-202ENST00000505149 CCDC155Q8N6L0 562 aa7.53□□□□□ -1.2
LINC01088-202ENST00000505149 IRF7Q92985 503 aa7.53□□□□□ -1.2
LINC01088-202ENST00000505149 M0R2N6 131 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms