RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 EPS8L1Q8TE68 723 aa9.99□□□□□ -0.81
UBE3D-205ENST00000503942 GMCL1Q96IK5 515 aa9.99□□□□□ -0.81
UBE3D-205ENST00000503942 MBIPQ9NS73 344 aa9.99□□□□□ -0.81
UBE3D-205ENST00000503942 TRIM22Q8IYM9 498 aa9.98□□□□□ -0.81
UBE3D-205ENST00000503942 AP1G2O75843 785 aa9.97□□□□□ -0.81
UBE3D-205ENST00000503942 PRICKLE2Q7Z3G6 844 aa9.97□□□□□ -0.81
UBE3D-205ENST00000503942 SEPT12Q8IYM1 358 aa9.97□□□□□ -0.81
UBE3D-205ENST00000503942 PROCA1Q8NCQ7 364 aaPredicted RBP9.97□□□□□ -0.81
UBE3D-205ENST00000503942 PHF20L1A8MW92 1017 aa9.96□□□□□ -0.82
UBE3D-205ENST00000503942 RHOQP17081 205 aa9.96□□□□□ -0.82
UBE3D-205ENST00000503942 PLA2G4EQ3MJ16 856 aa9.96□□□□□ -0.82
UBE3D-205ENST00000503942 DCAF5Q96JK2 942 aa9.96□□□□□ -0.82
UBE3D-205ENST00000503942 HMX1Q9NP08 348 aaPredicted RBP9.96□□□□□ -0.82
UBE3D-205ENST00000503942 CYLDQ9NQC7 956 aa9.96□□□□□ -0.82
UBE3D-205ENST00000503942 IGF1RP08069 1367 aa9.95□□□□□ -0.82
UBE3D-205ENST00000503942 GPR25O00155 361 aa9.94□□□□□ -0.82
UBE3D-205ENST00000503942 MSTNO14793 375 aa9.94□□□□□ -0.82
UBE3D-205ENST00000503942 FOXR1Q6PIV2 292 aa9.94□□□□□ -0.82
UBE3D-205ENST00000503942 TRIM52Q96A61 297 aa9.94□□□□□ -0.82
UBE3D-205ENST00000503942 CNTNAP5Q8WYK1 1306 aa9.93□□□□□ -0.82
UBE3D-205ENST00000503942 ITGB2P05107 769 aa9.93□□□□□ -0.82
UBE3D-205ENST00000503942 USP17L8P0C7I0 530 aa9.93□□□□□ -0.82
UBE3D-205ENST00000503942 GPC1P35052 558 aa9.93□□□□□ -0.82
UBE3D-205ENST00000503942 SPOCK3Q9BQ16 436 aa9.93□□□□□ -0.82
UBE3D-205ENST00000503942 ATP5J2-PTCD1G3V325 749 aa9.92□□□□□ -0.82
UBE3D-205ENST00000503942 BCRP11274 1271 aa9.92□□□□□ -0.82
UBE3D-205ENST00000503942 DBN1Q16643 649 aa9.92□□□□□ -0.82
UBE3D-205ENST00000503942 PODNQ7Z5L7 613 aa9.92□□□□□ -0.82
UBE3D-205ENST00000503942 BEND7Q8N7W2 519 aaPredicted RBP9.92□□□□□ -0.82
UBE3D-205ENST00000503942 DYRK1BQ9Y463 629 aa9.92□□□□□ -0.82
UBE3D-205ENST00000503942 ADAM23O75077 832 aa9.91□□□□□ -0.82
UBE3D-205ENST00000503942 RIPOR1Q6ZS17 1223 aa9.91□□□□□ -0.82
UBE3D-205ENST00000503942 ACDQ96AP0 544 aa9.91□□□□□ -0.82
UBE3D-205ENST00000503942 GTPBP3Q969Y2 492 aaKnown RBP9.9□□□□□ -0.82
UBE3D-205ENST00000503942 LRRC4BQ9NT99 713 aa9.9□□□□□ -0.82
UBE3D-205ENST00000503942 H7C1W4 665 aa9.89□□□□□ -0.83
UBE3D-205ENST00000503942 PROCP04070 461 aa9.89□□□□□ -0.83
UBE3D-205ENST00000503942 XP32Q5T750 250 aa9.89□□□□□ -0.83
UBE3D-205ENST00000503942 NEDD1Q8NHV4 660 aa9.89□□□□□ -0.83
UBE3D-205ENST00000503942 DDRGK1Q96HY6 314 aa9.89□□□□□ -0.83
UBE3D-205ENST00000503942 MEN1O00255 615 aa9.88□□□□□ -0.83
UBE3D-205ENST00000503942 TRERF1Q96PN7 1200 aa9.88□□□□□ -0.83
UBE3D-205ENST00000503942 ATP1B4Q9UN42 357 aaPredicted RBP9.88□□□□□ -0.83
UBE3D-205ENST00000503942 A0A1W2PRU2 124 aa9.87□□□□□ -0.83
UBE3D-205ENST00000503942 FAM117AQ9C073 453 aa9.87□□□□□ -0.83
UBE3D-205ENST00000503942 KDM4CQ9H3R0 1056 aa9.87□□□□□ -0.83
UBE3D-205ENST00000503942 POU4F2Q12837 409 aa9.86□□□□□ -0.83
UBE3D-205ENST00000503942 TRIM34Q9BYJ4 488 aa9.86□□□□□ -0.83
UBE3D-205ENST00000503942 GIGYF1O75420 1035 aaPredicted RBP9.85□□□□□ -0.83
UBE3D-205ENST00000503942 ERVK-9P63128 1117 aa9.85□□□□□ -0.83
UBE3D-205ENST00000503942 CCDC125Q86Z20 511 aa9.85□□□□□ -0.83
UBE3D-205ENST00000503942 GAS2L1Q99501 681 aaPredicted RBP9.85□□□□□ -0.83
UBE3D-205ENST00000503942 GPBP1L1Q9HC44 474 aaPredicted RBP9.85□□□□□ -0.83
UBE3D-205ENST00000503942 MX2P20592 715 aa9.84□□□□□ -0.83
UBE3D-205ENST00000503942 SLC27A3Q5K4L6 730 aa9.84□□□□□ -0.83
UBE3D-205ENST00000503942 NBPF10Q6P3W6 841 aaKnown RBP9.84□□□□□ -0.83
UBE3D-205ENST00000503942 NBPF15Q8N660 670 aa9.84□□□□□ -0.83
UBE3D-205ENST00000503942 NSFL1CQ9UNZ2 370 aaKnown RBP9.84□□□□□ -0.83
UBE3D-205ENST00000503942 ZBBXA8MT70 800 aa9.83□□□□□ -0.84
UBE3D-205ENST00000503942 OIP5O43482 229 aa9.83□□□□□ -0.84
UBE3D-205ENST00000503942 RFC5P40937 340 aa9.83□□□□□ -0.84
UBE3D-205ENST00000503942 CLN3Q13286 438 aa9.83□□□□□ -0.84
UBE3D-205ENST00000503942 WDR44Q5JSH3 913 aa9.83□□□□□ -0.84
UBE3D-205ENST00000503942 CC2D2BQ6DHV5 1058 aa9.83□□□□□ -0.84
UBE3D-205ENST00000503942 GALNT6Q8NCL4 622 aa9.83□□□□□ -0.84
UBE3D-205ENST00000503942 NLRP3Q96P20 1036 aa9.83□□□□□ -0.84
UBE3D-205ENST00000503942 GRIP2Q9C0E4 1043 aa9.83□□□□□ -0.84
UBE3D-205ENST00000503942 PCDHB9Q9Y5E1 797 aa9.83□□□□□ -0.84
UBE3D-205ENST00000503942 SPATA31C2B4DYI2 1134 aa9.82□□□□□ -0.84
UBE3D-205ENST00000503942 CYP2U1Q7Z449 544 aa9.81□□□□□ -0.84
UBE3D-205ENST00000503942 NUCKS1Q9H1E3 243 aaKnown RBP9.81□□□□□ -0.84
UBE3D-205ENST00000503942 FBXO45P0C2W1 286 aa9.8□□□□□ -0.84
UBE3D-205ENST00000503942 MAP2K3P46734 347 aa9.8□□□□□ -0.84
UBE3D-205ENST00000503942 OXCT2Q9BYC2 517 aaPredicted RBP9.8□□□□□ -0.84
UBE3D-205ENST00000503942 F11P03951 625 aa9.79□□□□□ -0.84
UBE3D-205ENST00000503942 RNF20Q5VTR2 975 aa9.79□□□□□ -0.84
UBE3D-205ENST00000503942 TIMMDC1Q9NPL8 285 aa9.79□□□□□ -0.84
UBE3D-205ENST00000503942 WASLO00401 505 aaPredicted RBP9.78□□□□□ -0.84
UBE3D-205ENST00000503942 SCTRP47872 440 aa9.78□□□□□ -0.84
UBE3D-205ENST00000503942 SNRPNP63162 240 aaKnown RBP9.78□□□□□ -0.84
UBE3D-205ENST00000503942 TAS1R3Q7RTX0 852 aa9.78□□□□□ -0.84
UBE3D-205ENST00000503942 K7ELQ4 463 aaPredicted RBP9.77□□□□□ -0.85
UBE3D-205ENST00000503942 THBS1P07996 1170 aa9.77□□□□□ -0.85
UBE3D-205ENST00000503942 ARHGEF10LQ9HCE6 1279 aa9.77□□□□□ -0.85
UBE3D-205ENST00000503942 KRBA1A5PL33 1030 aa9.76□□□□□ -0.85
UBE3D-205ENST00000503942 TRAK2O60296 914 aa9.76□□□□□ -0.85
UBE3D-205ENST00000503942 CFHR5Q9BXR6 569 aa9.76□□□□□ -0.85
UBE3D-205ENST00000503942 SHISA8B8ZZ34 492 aa9.75□□□□□ -0.85
UBE3D-205ENST00000503942 ALYREFQ86V81 257 aaKnown RBP9.75□□□□□ -0.85
UBE3D-205ENST00000503942 GJD4Q96KN9 370 aaPredicted RBP9.75□□□□□ -0.85
UBE3D-205ENST00000503942 OSBPL3Q9H4L5 887 aa9.75□□□□□ -0.85
UBE3D-205ENST00000503942 MKL2Q9ULH7 1088 aa9.75□□□□□ -0.85
UBE3D-205ENST00000503942 TMEM259Q4ZIN3 620 aa9.74□□□□□ -0.85
UBE3D-205ENST00000503942 BAG6P46379 1132 aa9.73□□□□□ -0.85
UBE3D-205ENST00000503942 GDF2Q9UK05 429 aaPredicted RBP9.73□□□□□ -0.85
UBE3D-205ENST00000503942 PCDHB11Q9Y5F2 797 aa9.73□□□□□ -0.85
UBE3D-205ENST00000503942 COL8A1P27658 744 aa9.72□□□□□ -0.85
UBE3D-205ENST00000503942 MCCD1P59942 119 aaPredicted RBP9.72□□□□□ -0.85
UBE3D-205ENST00000503942 C1orf229Q6ZS94 237 aaPredicted RBP9.72□□□□□ -0.85
UBE3D-205ENST00000503942 KLRG1Q96E93 195 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms