RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 IGHA1P01876 353 aa8.74□□□□□ -1.01
CLK1-214ENST00000496205 USP17L8P0C7I0 530 aa8.74□□□□□ -1.01
CLK1-214ENST00000496205 RNF144AP50876 292 aaPredicted RBP8.74□□□□□ -1.01
CLK1-214ENST00000496205 KDM4CQ9H3R0 1056 aa8.74□□□□□ -1.01
CLK1-214ENST00000496205 GPR25O00155 361 aa8.73□□□□□ -1.01
CLK1-214ENST00000496205 DBN1Q16643 649 aa8.73□□□□□ -1.01
CLK1-214ENST00000496205 ZNF837Q96EG3 531 aaPredicted RBP8.73□□□□□ -1.01
CLK1-214ENST00000496205 MAP3K10Q02779 954 aa8.72□□□□□ -1.01
CLK1-214ENST00000496205 CNTNAP5Q8WYK1 1306 aa8.72□□□□□ -1.01
CLK1-214ENST00000496205 TRIM22Q8IYM9 498 aa8.71□□□□□ -1.02
CLK1-214ENST00000496205 BCANQ96GW7 911 aa8.71□□□□□ -1.02
CLK1-214ENST00000496205 TRIM34Q9BYJ4 488 aa8.71□□□□□ -1.02
CLK1-214ENST00000496205 GIGYF1O75420 1035 aaPredicted RBP8.7□□□□□ -1.02
CLK1-214ENST00000496205 FOXK2Q01167 660 aa8.7□□□□□ -1.02
CLK1-214ENST00000496205 MBIPQ9NS73 344 aa8.7□□□□□ -1.02
CLK1-214ENST00000496205 ITGB2P05107 769 aa8.69□□□□□ -1.02
CLK1-214ENST00000496205 SEPT12Q8IYM1 358 aa8.69□□□□□ -1.02
CLK1-214ENST00000496205 PNMA1Q8ND90 353 aa8.69□□□□□ -1.02
CLK1-214ENST00000496205 DDRGK1Q96HY6 314 aa8.69□□□□□ -1.02
CLK1-214ENST00000496205 IGF1RP08069 1367 aa8.69□□□□□ -1.02
CLK1-214ENST00000496205 A0A1W2PRU2 124 aa8.68□□□□□ -1.02
CLK1-214ENST00000496205 ATP5J2-PTCD1G3V325 749 aa8.68□□□□□ -1.02
CLK1-214ENST00000496205 MEN1O00255 615 aa8.68□□□□□ -1.02
CLK1-214ENST00000496205 PRKCSHP14314 528 aaPredicted RBP8.68□□□□□ -1.02
CLK1-214ENST00000496205 RFC5P40937 340 aa8.68□□□□□ -1.02
CLK1-214ENST00000496205 RIPOR1Q6ZS17 1223 aa8.68□□□□□ -1.02
CLK1-214ENST00000496205 POU4F2Q12837 409 aa8.67□□□□□ -1.02
CLK1-214ENST00000496205 PLA2G4EQ3MJ16 856 aa8.67□□□□□ -1.02
CLK1-214ENST00000496205 GTPBP3Q969Y2 492 aaKnown RBP8.67□□□□□ -1.02
CLK1-214ENST00000496205 ACDQ96AP0 544 aa8.67□□□□□ -1.02
CLK1-214ENST00000496205 GMCL1Q96IK5 515 aa8.67□□□□□ -1.02
CLK1-214ENST00000496205 DCAF5Q96JK2 942 aa8.67□□□□□ -1.02
CLK1-214ENST00000496205 ENAMQ9NRM1 1142 aa8.67□□□□□ -1.02
CLK1-214ENST00000496205 GPC1P35052 558 aa8.66□□□□□ -1.02
CLK1-214ENST00000496205 BCRP11274 1271 aa8.65□□□□□ -1.02
CLK1-214ENST00000496205 GAS2L1Q99501 681 aaPredicted RBP8.65□□□□□ -1.02
CLK1-214ENST00000496205 DYRK1BQ9Y463 629 aa8.65□□□□□ -1.02
CLK1-214ENST00000496205 FOXR1Q6PIV2 292 aa8.64□□□□□ -1.03
CLK1-214ENST00000496205 GRIP2Q9C0E4 1043 aa8.64□□□□□ -1.03
CLK1-214ENST00000496205 PCDHB9Q9Y5E1 797 aa8.64□□□□□ -1.03
CLK1-214ENST00000496205 ZBBXA8MT70 800 aa8.63□□□□□ -1.03
CLK1-214ENST00000496205 PHF20L1A8MW92 1017 aa8.63□□□□□ -1.03
CLK1-214ENST00000496205 MSTNO14793 375 aa8.63□□□□□ -1.03
CLK1-214ENST00000496205 FBXO45P0C2W1 286 aa8.63□□□□□ -1.03
CLK1-214ENST00000496205 ERVK-9P63128 1117 aa8.63□□□□□ -1.03
CLK1-214ENST00000496205 BEND7Q8N7W2 519 aaPredicted RBP8.63□□□□□ -1.03
CLK1-214ENST00000496205 NEDD1Q8NHV4 660 aa8.63□□□□□ -1.03
CLK1-214ENST00000496205 SPOCK3Q9BQ16 436 aa8.63□□□□□ -1.03
CLK1-214ENST00000496205 SCTRP47872 440 aa8.62□□□□□ -1.03
CLK1-214ENST00000496205 H7C1W4 665 aa8.61□□□□□ -1.03
CLK1-214ENST00000496205 ADAM23O75077 832 aa8.61□□□□□ -1.03
CLK1-214ENST00000496205 SLC27A3Q5K4L6 730 aa8.61□□□□□ -1.03
CLK1-214ENST00000496205 CC2D2BQ6DHV5 1058 aa8.61□□□□□ -1.03
CLK1-214ENST00000496205 NBPF10Q6P3W6 841 aaKnown RBP8.61□□□□□ -1.03
CLK1-214ENST00000496205 NBPF15Q8N660 670 aa8.61□□□□□ -1.03
CLK1-214ENST00000496205 GJD4Q96KN9 370 aaPredicted RBP8.61□□□□□ -1.03
CLK1-214ENST00000496205 PROCP04070 461 aa8.6□□□□□ -1.03
CLK1-214ENST00000496205 THBS1P07996 1170 aa8.6□□□□□ -1.03
CLK1-214ENST00000496205 NLRP3Q96P20 1036 aa8.6□□□□□ -1.03
CLK1-214ENST00000496205 SPATA31C2B4DYI2 1134 aa8.59□□□□□ -1.03
CLK1-214ENST00000496205 MX2P20592 715 aa8.59□□□□□ -1.03
CLK1-214ENST00000496205 CLN3Q13286 438 aa8.59□□□□□ -1.03
CLK1-214ENST00000496205 TRERF1Q96PN7 1200 aa8.59□□□□□ -1.03
CLK1-214ENST00000496205 SNRPNP63162 240 aaKnown RBP8.58□□□□□ -1.04
CLK1-214ENST00000496205 XP32Q5T750 250 aa8.58□□□□□ -1.04
CLK1-214ENST00000496205 OSBPL3Q9H4L5 887 aa8.58□□□□□ -1.04
CLK1-214ENST00000496205 OIP5O43482 229 aa8.57□□□□□ -1.04
CLK1-214ENST00000496205 TRAK2O60296 914 aa8.57□□□□□ -1.04
CLK1-214ENST00000496205 TMEM259Q4ZIN3 620 aa8.57□□□□□ -1.04
CLK1-214ENST00000496205 PODNQ7Z5L7 613 aa8.57□□□□□ -1.04
CLK1-214ENST00000496205 TRIM52Q96A61 297 aa8.57□□□□□ -1.04
CLK1-214ENST00000496205 NUCKS1Q9H1E3 243 aaKnown RBP8.57□□□□□ -1.04
CLK1-214ENST00000496205 ARHGEF10LQ9HCE6 1279 aa8.57□□□□□ -1.04
CLK1-214ENST00000496205 TIMMDC1Q9NPL8 285 aa8.57□□□□□ -1.04
CLK1-214ENST00000496205 F11P03951 625 aa8.56□□□□□ -1.04
CLK1-214ENST00000496205 WDR44Q5JSH3 913 aa8.56□□□□□ -1.04
CLK1-214ENST00000496205 C1orf229Q6ZS94 237 aaPredicted RBP8.56□□□□□ -1.04
CLK1-214ENST00000496205 LRRC4BQ9NT99 713 aa8.56□□□□□ -1.04
CLK1-214ENST00000496205 WASLO00401 505 aaPredicted RBP8.55□□□□□ -1.04
CLK1-214ENST00000496205 RNF20Q5VTR2 975 aa8.55□□□□□ -1.04
CLK1-214ENST00000496205 CYP2U1Q7Z449 544 aa8.55□□□□□ -1.04
CLK1-214ENST00000496205 CCDC125Q86Z20 511 aa8.55□□□□□ -1.04
CLK1-214ENST00000496205 RAB6BQ9NRW1 208 aa8.55□□□□□ -1.04
CLK1-214ENST00000496205 PCDHB11Q9Y5F2 797 aa8.55□□□□□ -1.04
CLK1-214ENST00000496205 SHISA8B8ZZ34 492 aa8.54□□□□□ -1.04
CLK1-214ENST00000496205 TAS1R3Q7RTX0 852 aa8.54□□□□□ -1.04
CLK1-214ENST00000496205 OXCT2Q9BYC2 517 aaPredicted RBP8.54□□□□□ -1.04
CLK1-214ENST00000496205 KRBA1A5PL33 1030 aa8.53□□□□□ -1.04
CLK1-214ENST00000496205 TPRNQ4KMQ1 711 aa8.53□□□□□ -1.04
CLK1-214ENST00000496205 PCMTD1Q96MG8 357 aaPredicted RBP8.53□□□□□ -1.04
CLK1-214ENST00000496205 GOPCQ9HD26 462 aa8.53□□□□□ -1.04
CLK1-214ENST00000496205 NSFL1CQ9UNZ2 370 aaKnown RBP8.53□□□□□ -1.04
CLK1-214ENST00000496205 GPR37L1O60883 481 aa8.52□□□□□ -1.05
CLK1-214ENST00000496205 IL2RAP01589 272 aa8.52□□□□□ -1.05
CLK1-214ENST00000496205 PHKA2P46019 1235 aa8.52□□□□□ -1.05
CLK1-214ENST00000496205 CENPCQ03188 943 aa8.52□□□□□ -1.05
CLK1-214ENST00000496205 NR1H3Q13133 447 aa8.52□□□□□ -1.05
CLK1-214ENST00000496205 UBAP2LQ14157 1087 aaKnown RBP8.52□□□□□ -1.05
CLK1-214ENST00000496205 KLRG1Q96E93 195 aa8.52□□□□□ -1.05
CLK1-214ENST00000496205 CFHR5Q9BXR6 569 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms